EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000021148 (Gene tree)
Gene ID: 100054806
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 27192 bases
Position: chr5:59951351-59978542
Accession: 100054806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000018582	RRM_1	PF00076.22	2.6e-17	1	2
ENSECAP00000018582	RRM_1	PF00076.22	2.6e-17	2	2
ENSECAP00000040181	RRM_1	PF00076.22	2.6e-17	1	2
ENSECAP00000040181	RRM_1	PF00076.22	2.6e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000022478	RNPC3-201	1643	-	ENSECAP00000018582	517 (aa)	XP_023497298	F6VNF6
ENSECAT00000043543	RNPC3-202	2221	-	ENSECAP00000040181	517 (aa)	XP_023497298	UPI0004BE0FC7

Gene Model

Click here to download ENSECAG00000021148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000021148's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000021148	RNPC3	100	92.664	ENSG00000185946	RNPC3	100	94.624	Homo_sapiens
ENSECAG00000021148	RNPC3	95	57.374	ENSAPOG00000017371	rnpc3	97	57.374	Acanthochromis_polyacanthus
ENSECAG00000021148	RNPC3	98	93.713	ENSAMEG00000001694	RNPC3	100	92.885	Ailuropoda_melanoleuca
ENSECAG00000021148	RNPC3	95	53.600	ENSACIG00000021043	rnpc3	97	53.400	Amphilophus_citrinellus
ENSECAG00000021148	RNPC3	95	56.886	ENSAOCG00000014052	rnpc3	95	56.886	Amphiprion_ocellaris
ENSECAG00000021148	RNPC3	95	56.687	ENSAPEG00000008739	rnpc3	95	56.687	Amphiprion_percula
ENSECAG00000021148	RNPC3	95	55.467	ENSATEG00000021263	rnpc3	97	55.534	Anabas_testudineus
ENSECAG00000021148	RNPC3	87	69.737	ENSAPLG00000015605	RNPC3	99	70.640	Anas_platyrhynchos
ENSECAG00000021148	RNPC3	95	68.228	ENSACAG00000002029	RNPC3	97	68.327	Anolis_carolinensis
ENSECAG00000021148	RNPC3	100	91.892	ENSANAG00000019950	RNPC3	100	91.892	Aotus_nancymaae
ENSECAG00000021148	RNPC3	94	54.858	ENSACLG00000014702	rnpc3	96	54.858	Astatotilapia_calliptera
ENSECAG00000021148	RNPC3	94	58.149	ENSAMXG00000033372	rnpc3	96	58.149	Astyanax_mexicanus
ENSECAG00000021148	RNPC3	100	92.857	ENSBTAG00000019091	RNPC3	100	92.857	Bos_taurus
ENSECAG00000021148	RNPC3	100	87.838	ENSCJAG00000035686	RNPC3	100	88.224	Callithrix_jacchus
ENSECAG00000021148	RNPC3	100	93.629	ENSCAFG00000019972	RNPC3	100	93.629	Canis_familiaris
ENSECAG00000021148	RNPC3	100	93.629	ENSCAFG00020011300	RNPC3	100	93.629	Canis_lupus_dingo
ENSECAG00000021148	RNPC3	100	93.436	ENSCHIG00000020361	RNPC3	100	93.436	Capra_hircus
ENSECAG00000021148	RNPC3	100	91.892	ENSTSYG00000030256	RNPC3	100	91.892	Carlito_syrichta
ENSECAG00000021148	RNPC3	84	78.947	ENSCAPG00000013600	RNPC3	97	78.654	Cavia_aperea
ENSECAG00000021148	RNPC3	100	90.541	ENSCPOG00000031638	RNPC3	100	90.541	Cavia_porcellus
ENSECAG00000021148	RNPC3	100	92.085	ENSCCAG00000024301	RNPC3	100	92.085	Cebus_capucinus
ENSECAG00000021148	RNPC3	99	92.636	ENSCATG00000002086	RNPC3	99	92.636	Cercocebus_atys
ENSECAG00000021148	RNPC3	98	70.414	ENSCATG00000035930	-	99	69.231	Cercocebus_atys
ENSECAG00000021148	RNPC3	100	87.259	ENSCLAG00000005169	RNPC3	100	87.259	Chinchilla_lanigera
ENSECAG00000021148	RNPC3	99	92.442	ENSCSAG00000001519	RNPC3	99	92.442	Chlorocebus_sabaeus
ENSECAG00000021148	RNPC3	97	69.608	ENSCPBG00000028311	RNPC3	99	68.571	Chrysemys_picta_bellii
ENSECAG00000021148	RNPC3	95	37.016	ENSCING00000021276	-	98	38.028	Ciona_intestinalis
ENSECAG00000021148	RNPC3	67	50.307	ENSCSAVG00000002800	-	84	50.307	Ciona_savignyi
ENSECAG00000021148	RNPC3	99	92.054	ENSCANG00000031444	RNPC3	99	92.054	Colobus_angolensis_palliatus
ENSECAG00000021148	RNPC3	99	89.555	ENSCGRG00001019276	Rnpc3	100	89.555	Cricetulus_griseus_chok1gshd
ENSECAG00000021148	RNPC3	87	90.044	ENSCGRG00000000053	Rnpc3	100	90.044	Cricetulus_griseus_crigri
ENSECAG00000021148	RNPC3	94	54.234	ENSCSEG00000013475	rnpc3	96	54.234	Cynoglossus_semilaevis
ENSECAG00000021148	RNPC3	94	55.666	ENSCVAG00000002645	rnpc3	97	55.336	Cyprinodon_variegatus
ENSECAG00000021148	RNPC3	95	55.556	ENSDARG00000011247	rnpc3	91	64.118	Danio_rerio
ENSECAG00000021148	RNPC3	100	92.278	ENSDNOG00000044555	-	100	92.278	Dasypus_novemcinctus
ENSECAG00000021148	RNPC3	100	91.892	ENSDNOG00000047498	-	100	91.892	Dasypus_novemcinctus
ENSECAG00000021148	RNPC3	99	90.135	ENSDORG00000027343	Rnpc3	99	90.135	Dipodomys_ordii
ENSECAG00000021148	RNPC3	94	47.826	ENSEBUG00000002068	rnpc3	97	48.310	Eptatretus_burgeri
ENSECAG00000021148	RNPC3	100	99.226	ENSEASG00005015957	RNPC3	100	99.226	Equus_asinus_asinus
ENSECAG00000021148	RNPC3	95	53.876	ENSELUG00000002264	rnpc3	97	51.803	Esox_lucius
ENSECAG00000021148	RNPC3	100	93.436	ENSFCAG00000024312	RNPC3	100	93.436	Felis_catus
ENSECAG00000021148	RNPC3	87	72.467	ENSFALG00000002580	RNPC3	99	72.596	Ficedula_albicollis
ENSECAG00000021148	RNPC3	99	91.103	ENSFDAG00000019948	RNPC3	100	91.103	Fukomys_damarensis
ENSECAG00000021148	RNPC3	95	52.113	ENSFHEG00000020647	rnpc3	98	50.881	Fundulus_heteroclitus
ENSECAG00000021148	RNPC3	94	54.910	ENSGMOG00000019213	rnpc3	95	53.441	Gadus_morhua
ENSECAG00000021148	RNPC3	95	72.323	ENSGALG00000005162	RNPC3	89	71.717	Gallus_gallus
ENSECAG00000021148	RNPC3	94	54.491	ENSGAFG00000017236	rnpc3	96	54.691	Gambusia_affinis
ENSECAG00000021148	RNPC3	94	54.400	ENSGACG00000002048	rnpc3	96	54.563	Gasterosteus_aculeatus
ENSECAG00000021148	RNPC3	95	70.766	ENSGAGG00000008438	RNPC3	98	69.472	Gopherus_agassizii
ENSECAG00000021148	RNPC3	99	74.023	ENSGGOG00000026201	-	99	74.175	Gorilla_gorilla
ENSECAG00000021148	RNPC3	78	81.579	ENSHBUG00000015966	rnpc3	82	81.579	Haplochromis_burtoni
ENSECAG00000021148	RNPC3	100	90.927	ENSHGLG00000001708	RNPC3	100	90.927	Heterocephalus_glaber_female
ENSECAG00000021148	RNPC3	100	90.927	ENSHGLG00100003005	RNPC3	100	90.927	Heterocephalus_glaber_male
ENSECAG00000021148	RNPC3	95	55.644	ENSHCOG00000017135	rnpc3	97	55.422	Hippocampus_comes
ENSECAG00000021148	RNPC3	95	57.460	ENSIPUG00000002916	rnpc3	97	56.600	Ictalurus_punctatus
ENSECAG00000021148	RNPC3	100	90.734	ENSSTOG00000025020	RNPC3	100	90.734	Ictidomys_tridecemlineatus
ENSECAG00000021148	RNPC3	99	86.267	ENSJJAG00000010203	Rnpc3	100	87.814	Jaculus_jaculus
ENSECAG00000021148	RNPC3	95	55.466	ENSKMAG00000017358	rnpc3	97	54.871	Kryptolebias_marmoratus
ENSECAG00000021148	RNPC3	95	56.513	ENSLBEG00000024901	rnpc3	95	56.513	Labrus_bergylta
ENSECAG00000021148	RNPC3	94	63.211	ENSLACG00000005720	RNPC3	90	63.821	Latimeria_chalumnae
ENSECAG00000021148	RNPC3	94	59.388	ENSLOCG00000007986	rnpc3	96	61.633	Lepisosteus_oculatus
ENSECAG00000021148	RNPC3	99	89.168	ENSLAFG00000032342	RNPC3	100	90.522	Loxodonta_africana
ENSECAG00000021148	RNPC3	99	92.442	ENSMFAG00000002004	RNPC3	99	92.442	Macaca_fascicularis
ENSECAG00000021148	RNPC3	99	66.732	ENSMFAG00000002917	-	99	67.258	Macaca_fascicularis
ENSECAG00000021148	RNPC3	84	83.178	ENSMMUG00000002098	-	93	83.178	Macaca_mulatta
ENSECAG00000021148	RNPC3	99	92.054	ENSMMUG00000018039	RNPC3	99	92.054	Macaca_mulatta
ENSECAG00000021148	RNPC3	99	63.601	ENSMNEG00000029209	-	99	66.535	Macaca_nemestrina
ENSECAG00000021148	RNPC3	99	87.791	ENSMNEG00000033950	RNPC3	99	87.791	Macaca_nemestrina
ENSECAG00000021148	RNPC3	99	92.636	ENSMLEG00000033628	RNPC3	99	92.636	Mandrillus_leucophaeus
ENSECAG00000021148	RNPC3	98	69.080	ENSMLEG00000034644	-	98	68.093	Mandrillus_leucophaeus
ENSECAG00000021148	RNPC3	95	52.165	ENSMAMG00000007496	rnpc3	97	51.060	Mastacembelus_armatus
ENSECAG00000021148	RNPC3	94	54.043	ENSMZEG00005020233	rnpc3	97	54.043	Maylandia_zebra
ENSECAG00000021148	RNPC3	87	71.429	ENSMGAG00000006381	RNPC3	99	71.648	Meleagris_gallopavo
ENSECAG00000021148	RNPC3	96	90.381	ENSMAUG00000001358	Rnpc3	100	89.168	Mesocricetus_auratus
ENSECAG00000021148	RNPC3	99	93.037	ENSMICG00000029591	RNPC3	99	93.037	Microcebus_murinus
ENSECAG00000021148	RNPC3	97	89.800	ENSMOCG00000013423	Rnpc3	100	88.417	Microtus_ochrogaster
ENSECAG00000021148	RNPC3	95	52.439	ENSMMOG00000005309	rnpc3	97	52.410	Mola_mola
ENSECAG00000021148	RNPC3	99	78.488	ENSMODG00000002946	RNPC3	99	78.488	Monodelphis_domestica
ENSECAG00000021148	RNPC3	94	54.217	ENSMALG00000015471	rnpc3	97	54.016	Monopterus_albus
ENSECAG00000021148	RNPC3	99	87.403	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.403	Mus_caroli
ENSECAG00000021148	RNPC3	99	87.791	ENSMUSG00000027981	Rnpc3	100	87.791	Mus_musculus
ENSECAG00000021148	RNPC3	99	87.984	MGP_PahariEiJ_G0027001	Rnpc3	100	87.984	Mus_pahari
ENSECAG00000021148	RNPC3	99	87.209	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.209	Mus_spretus
ENSECAG00000021148	RNPC3	100	92.664	ENSMPUG00000007349	RNPC3	100	92.664	Mustela_putorius_furo
ENSECAG00000021148	RNPC3	100	89.575	ENSMLUG00000028743	RNPC3	100	89.575	Myotis_lucifugus
ENSECAG00000021148	RNPC3	99	89.341	ENSNGAG00000010939	Rnpc3	99	89.341	Nannospalax_galili
ENSECAG00000021148	RNPC3	94	54.656	ENSNBRG00000012196	rnpc3	93	54.656	Neolamprologus_brichardi
ENSECAG00000021148	RNPC3	100	92.278	ENSNLEG00000012013	RNPC3	100	92.278	Nomascus_leucogenys
ENSECAG00000021148	RNPC3	100	88.417	ENSODEG00000007612	RNPC3	100	88.417	Octodon_degus
ENSECAG00000021148	RNPC3	94	55.668	ENSONIG00000004770	rnpc3	99	55.668	Oreochromis_niloticus
ENSECAG00000021148	RNPC3	90	77.039	ENSOANG00000008220	RNPC3	99	77.039	Ornithorhynchus_anatinus
ENSECAG00000021148	RNPC3	100	92.085	ENSOCUG00000004016	RNPC3	100	92.085	Oryctolagus_cuniculus
ENSECAG00000021148	RNPC3	95	54.032	ENSORLG00000005694	rnpc3	97	54.032	Oryzias_latipes
ENSECAG00000021148	RNPC3	95	54.637	ENSORLG00020005513	rnpc3	97	54.637	Oryzias_latipes_hni
ENSECAG00000021148	RNPC3	95	54.234	ENSORLG00015002179	rnpc3	97	54.234	Oryzias_latipes_hsok
ENSECAG00000021148	RNPC3	95	54.637	ENSOMEG00000017737	rnpc3	97	55.734	Oryzias_melastigma
ENSECAG00000021148	RNPC3	100	93.436	ENSOGAG00000026182	RNPC3	100	93.436	Otolemur_garnettii
ENSECAG00000021148	RNPC3	100	93.243	ENSOARG00000018719	RNPC3	100	93.243	Ovis_aries
ENSECAG00000021148	RNPC3	100	74.662	ENSPPAG00000030278	-	100	74.855	Pan_paniscus
ENSECAG00000021148	RNPC3	100	92.293	ENSPPAG00000037459	RNPC3	100	92.293	Pan_paniscus
ENSECAG00000021148	RNPC3	100	93.822	ENSPPRG00000020246	RNPC3	100	93.822	Panthera_pardus
ENSECAG00000021148	RNPC3	98	93.898	ENSPTIG00000009887	RNPC3	100	93.898	Panthera_tigris_altaica
ENSECAG00000021148	RNPC3	100	92.471	ENSPTRG00000033902	RNPC3	100	92.471	Pan_troglodytes
ENSECAG00000021148	RNPC3	100	74.275	ENSPTRG00000044227	-	100	74.275	Pan_troglodytes
ENSECAG00000021148	RNPC3	98	72.835	ENSPANG00000029957	-	100	71.654	Papio_anubis
ENSECAG00000021148	RNPC3	99	92.636	ENSPANG00000012137	RNPC3	99	92.636	Papio_anubis
ENSECAG00000021148	RNPC3	94	53.564	ENSPKIG00000008828	rnpc3	95	52.756	Paramormyrops_kingsleyae
ENSECAG00000021148	RNPC3	63	69.394	ENSPSIG00000007396	RNPC3	99	67.879	Pelodiscus_sinensis
ENSECAG00000021148	RNPC3	93	51.215	ENSPMGG00000011742	rnpc3	95	51.619	Periophthalmus_magnuspinnatus
ENSECAG00000021148	RNPC3	88	88.403	ENSPEMG00000020112	Rnpc3	100	89.159	Peromyscus_maniculatus_bairdii
ENSECAG00000021148	RNPC3	96	45.019	ENSPMAG00000003778	rnpc3	98	45.889	Petromyzon_marinus
ENSECAG00000021148	RNPC3	99	79.457	ENSPCIG00000004415	-	99	79.457	Phascolarctos_cinereus
ENSECAG00000021148	RNPC3	95	53.892	ENSPFOG00000009895	rnpc3	97	53.892	Poecilia_formosa
ENSECAG00000021148	RNPC3	95	53.892	ENSPLAG00000012023	rnpc3	97	53.892	Poecilia_latipinna
ENSECAG00000021148	RNPC3	96	53.280	ENSPMEG00000003663	rnpc3	97	54.092	Poecilia_mexicana
ENSECAG00000021148	RNPC3	96	53.465	ENSPREG00000010206	rnpc3	99	53.295	Poecilia_reticulata
ENSECAG00000021148	RNPC3	84	88.736	ENSPPYG00000001102	RNPC3	99	88.736	Pongo_abelii
ENSECAG00000021148	RNPC3	94	54.656	ENSPNYG00000020603	rnpc3	96	54.656	Pundamilia_nyererei
ENSECAG00000021148	RNPC3	95	53.861	ENSPNAG00000000524	rnpc3	89	54.545	Pygocentrus_nattereri
ENSECAG00000021148	RNPC3	99	87.427	ENSRNOG00000017310	Rnpc3	100	87.427	Rattus_norvegicus
ENSECAG00000021148	RNPC3	99	86.847	ENSRBIG00000043897	RNPC3	99	86.847	Rhinopithecus_bieti
ENSECAG00000021148	RNPC3	99	92.636	ENSRROG00000032334	RNPC3	99	92.636	Rhinopithecus_roxellana
ENSECAG00000021148	RNPC3	100	91.506	ENSSBOG00000024473	RNPC3	98	93.548	Saimiri_boliviensis_boliviensis
ENSECAG00000021148	RNPC3	99	78.682	ENSSHAG00000011859	RNPC3	99	78.682	Sarcophilus_harrisii
ENSECAG00000021148	RNPC3	95	59.281	ENSSFOG00015013055	rnpc3	99	57.282	Scleropages_formosus
ENSECAG00000021148	RNPC3	95	52.295	ENSSMAG00000020346	rnpc3	97	51.550	Scophthalmus_maximus
ENSECAG00000021148	RNPC3	94	55.689	ENSSDUG00000006600	rnpc3	96	55.689	Seriola_dumerili
ENSECAG00000021148	RNPC3	94	55.489	ENSSLDG00000007979	rnpc3	96	55.489	Seriola_lalandi_dorsalis
ENSECAG00000021148	RNPC3	95	71.400	ENSSPUG00000008539	-	94	71.748	Sphenodon_punctatus
ENSECAG00000021148	RNPC3	96	65.800	ENSSPUG00000003872	-	92	66.129	Sphenodon_punctatus
ENSECAG00000021148	RNPC3	95	55.894	ENSSPAG00000005633	rnpc3	97	56.504	Stegastes_partitus
ENSECAG00000021148	RNPC3	100	91.699	ENSSSCG00000037254	RNPC3	100	91.506	Sus_scrofa
ENSECAG00000021148	RNPC3	87	71.965	ENSTGUG00000004795	-	99	71.082	Taeniopygia_guttata
ENSECAG00000021148	RNPC3	95	54.819	ENSTNIG00000018963	rnpc3	97	54.819	Tetraodon_nigroviridis
ENSECAG00000021148	RNPC3	98	93.898	ENSUMAG00000007775	RNPC3	100	93.898	Ursus_maritimus
ENSECAG00000021148	RNPC3	100	93.629	ENSVVUG00000000331	RNPC3	100	93.629	Vulpes_vulpes
ENSECAG00000021148	RNPC3	95	52.000	ENSXETG00000025027	rnpc3	97	52.000	Xenopus_tropicalis
ENSECAG00000021148	RNPC3	96	52.953	ENSXCOG00000005013	rnpc3	97	51.737	Xiphophorus_couchianus
ENSECAG00000021148	RNPC3	95	54.473	ENSXMAG00000006495	rnpc3	97	54.473	Xiphophorus_maculatus