EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000021208 (Gene tree)
Gene ID: 100052499
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 72369 bases
Position: chr5:9616005-9688373
Accession: 22260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000018812	zf-CCCH	PF00642.24	0.00027	1	1
ENSECAP00000033232	zf-CCCH	PF00642.24	0.00027	1	1
ENSECAP00000031663	zf-CCCH	PF00642.24	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000050019	-	3363	-	ENSECAP00000033232	1071 (aa)	-	-
ENSECAT00000022746	-	3372	-	ENSECAP00000018812	1074 (aa)	XP_023496349	F6QZ44
ENSECAT00000031264	-	4359	-	ENSECAP00000031663	1122 (aa)	XP_023496346	UPI000214B252

Gene Model

Click here to download ENSECAG00000021208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000021208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000021208	RC3H1	96	54.320	ENSECAG00000022176	RC3H2	87	54.715

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000021208	RC3H1	100	96.444	ENSG00000135870	RC3H1	100	96.444	Homo_sapiens
ENSECAG00000021208	RC3H1	100	95.495	ENSAMEG00000015657	RC3H1	100	95.495	Ailuropoda_melanoleuca
ENSECAG00000021208	RC3H1	100	86.475	ENSAPLG00000005341	RC3H1	100	85.939	Anas_platyrhynchos
ENSECAG00000021208	RC3H1	100	84.367	ENSACAG00000015271	RC3H1	100	84.077	Anolis_carolinensis
ENSECAG00000021208	RC3H1	100	96.028	ENSANAG00000036716	RC3H1	100	96.028	Aotus_nancymaae
ENSECAG00000021208	RC3H1	100	95.730	ENSBTAG00000052708	RC3H1	100	95.730	Bos_taurus
ENSECAG00000021208	RC3H1	100	95.675	ENSCJAG00000009106	RC3H1	100	95.675	Callithrix_jacchus
ENSECAG00000021208	RC3H1	100	95.495	ENSCAFG00000014434	RC3H1	100	95.495	Canis_familiaris
ENSECAG00000021208	RC3H1	100	95.410	ENSCAFG00020017112	RC3H1	99	97.978	Canis_lupus_dingo
ENSECAG00000021208	RC3H1	100	96.349	ENSCHIG00000002873	RC3H1	100	96.349	Capra_hircus
ENSECAG00000021208	RC3H1	99	93.728	ENSTSYG00000003913	RC3H1	99	93.728	Carlito_syrichta
ENSECAG00000021208	RC3H1	100	89.938	ENSCPOG00000004349	RC3H1	100	89.762	Cavia_porcellus
ENSECAG00000021208	RC3H1	100	93.469	ENSCCAG00000025652	RC3H1	98	95.598	Cebus_capucinus
ENSECAG00000021208	RC3H1	100	95.940	ENSCATG00000033497	RC3H1	100	95.940	Cercocebus_atys
ENSECAG00000021208	RC3H1	100	93.380	ENSCLAG00000011267	RC3H1	100	93.380	Chinchilla_lanigera
ENSECAG00000021208	RC3H1	96	96.041	ENSCSAG00000011823	RC3H1	85	96.041	Chlorocebus_sabaeus
ENSECAG00000021208	RC3H1	100	88.909	ENSCPBG00000014670	RC3H1	100	88.447	Chrysemys_picta_bellii
ENSECAG00000021208	RC3H1	100	95.944	ENSCANG00000032120	RC3H1	100	95.944	Colobus_angolensis_palliatus
ENSECAG00000021208	RC3H1	100	92.750	ENSCGRG00001020812	Rc3h1	100	92.396	Cricetulus_griseus_chok1gshd
ENSECAG00000021208	RC3H1	100	92.750	ENSCGRG00000011952	Rc3h1	100	92.396	Cricetulus_griseus_crigri
ENSECAG00000021208	RC3H1	58	94.032	ENSDNOG00000011494	RC3H1	99	94.032	Dasypus_novemcinctus
ENSECAG00000021208	RC3H1	100	94.170	ENSDORG00000004855	Rc3h1	100	94.170	Dipodomys_ordii
ENSECAG00000021208	RC3H1	86	95.449	ENSETEG00000012064	RC3H1	87	95.449	Echinops_telfairi
ENSECAG00000021208	RC3H1	100	99.822	ENSEASG00005017000	RC3H1	100	99.822	Equus_asinus_asinus
ENSECAG00000021208	RC3H1	83	96.218	ENSEEUG00000014861	RC3H1	93	82.746	Erinaceus_europaeus
ENSECAG00000021208	RC3H1	100	95.852	ENSFCAG00000014924	RC3H1	100	95.852	Felis_catus
ENSECAG00000021208	RC3H1	100	85.490	ENSFALG00000002947	RC3H1	100	84.339	Ficedula_albicollis
ENSECAG00000021208	RC3H1	100	93.910	ENSFDAG00000013303	RC3H1	100	93.910	Fukomys_damarensis
ENSECAG00000021208	RC3H1	100	87.533	ENSGALG00000004587	RC3H1	100	86.903	Gallus_gallus
ENSECAG00000021208	RC3H1	100	87.985	ENSGAGG00000018194	RC3H1	100	87.893	Gopherus_agassizii
ENSECAG00000021208	RC3H1	100	90.622	ENSGGOG00000005735	RC3H1	100	90.622	Gorilla_gorilla
ENSECAG00000021208	RC3H1	92	88.482	ENSHGLG00000004183	-	99	88.451	Heterocephalus_glaber_female
ENSECAG00000021208	RC3H1	100	93.027	ENSHGLG00100008577	RC3H1	100	93.027	Heterocephalus_glaber_male
ENSECAG00000021208	RC3H1	100	94.528	ENSSTOG00000016033	RC3H1	100	94.528	Ictidomys_tridecemlineatus
ENSECAG00000021208	RC3H1	100	93.463	ENSJJAG00000018915	Rc3h1	100	93.375	Jaculus_jaculus
ENSECAG00000021208	RC3H1	100	74.913	ENSLACG00000016186	RC3H1	100	77.941	Latimeria_chalumnae
ENSECAG00000021208	RC3H1	97	95.716	ENSLAFG00000004367	RC3H1	100	95.716	Loxodonta_africana
ENSECAG00000021208	RC3H1	100	95.852	ENSMFAG00000033725	RC3H1	100	95.852	Macaca_fascicularis
ENSECAG00000021208	RC3H1	100	96.444	ENSMMUG00000000630	RC3H1	100	96.444	Macaca_mulatta
ENSECAG00000021208	RC3H1	100	95.940	ENSMNEG00000035968	RC3H1	100	95.940	Macaca_nemestrina
ENSECAG00000021208	RC3H1	100	95.852	ENSMLEG00000037455	RC3H1	100	95.852	Mandrillus_leucophaeus
ENSECAG00000021208	RC3H1	100	90.326	ENSMAUG00000020864	Rc3h1	100	89.953	Mesocricetus_auratus
ENSECAG00000021208	RC3H1	100	95.760	ENSMICG00000003000	RC3H1	100	95.760	Microcebus_murinus
ENSECAG00000021208	RC3H1	93	91.374	ENSMOCG00000016587	Rc3h1	98	91.090	Microtus_ochrogaster
ENSECAG00000021208	RC3H1	100	90.741	ENSMODG00000004289	RC3H1	100	90.829	Monodelphis_domestica
ENSECAG00000021208	RC3H1	100	91.873	MGP_CAROLIEiJ_G0014756	Rc3h1	100	91.078	Mus_caroli
ENSECAG00000021208	RC3H1	100	92.520	ENSMUSG00000040423	Rc3h1	100	92.164	Mus_musculus
ENSECAG00000021208	RC3H1	100	91.696	MGP_PahariEiJ_G0027992	Rc3h1	100	91.343	Mus_pahari
ENSECAG00000021208	RC3H1	100	92.342	MGP_SPRETEiJ_G0015563	Rc3h1	100	91.986	Mus_spretus
ENSECAG00000021208	RC3H1	100	95.234	ENSMPUG00000004747	RC3H1	100	95.234	Mustela_putorius_furo
ENSECAG00000021208	RC3H1	100	93.905	ENSMLUG00000011127	RC3H1	100	93.905	Myotis_lucifugus
ENSECAG00000021208	RC3H1	100	94.081	ENSNGAG00000011135	Rc3h1	100	93.728	Nannospalax_galili
ENSECAG00000021208	RC3H1	100	95.675	ENSNLEG00000015327	RC3H1	100	95.675	Nomascus_leucogenys
ENSECAG00000021208	RC3H1	99	81.770	ENSOPRG00000013068	RC3H1	99	81.206	Ochotona_princeps
ENSECAG00000021208	RC3H1	100	93.116	ENSODEG00000014185	RC3H1	100	93.116	Octodon_degus
ENSECAG00000021208	RC3H1	100	89.802	ENSOANG00000000924	RC3H1	100	89.258	Ornithorhynchus_anatinus
ENSECAG00000021208	RC3H1	99	94.892	ENSOCUG00000004930	RC3H1	98	94.892	Oryctolagus_cuniculus
ENSECAG00000021208	RC3H1	100	88.448	ENSOGAG00000004044	RC3H1	100	88.448	Otolemur_garnettii
ENSECAG00000021208	RC3H1	100	94.912	ENSOARG00000013011	RC3H1	100	94.912	Ovis_aries
ENSECAG00000021208	RC3H1	100	95.767	ENSPPAG00000039253	RC3H1	100	95.767	Pan_paniscus
ENSECAG00000021208	RC3H1	100	96.883	ENSPPRG00000009007	RC3H1	100	96.883	Panthera_pardus
ENSECAG00000021208	RC3H1	100	95.690	ENSPTIG00000015326	RC3H1	100	95.690	Panthera_tigris_altaica
ENSECAG00000021208	RC3H1	100	95.767	ENSPTRG00000001702	RC3H1	100	95.767	Pan_troglodytes
ENSECAG00000021208	RC3H1	100	95.852	ENSPANG00000008886	RC3H1	100	95.852	Papio_anubis
ENSECAG00000021208	RC3H1	100	88.594	ENSPSIG00000016181	RC3H1	100	88.771	Pelodiscus_sinensis
ENSECAG00000021208	RC3H1	100	92.403	ENSPEMG00000011966	Rc3h1	100	91.961	Peromyscus_maniculatus_bairdii
ENSECAG00000021208	RC3H1	74	93.418	ENSPCIG00000002058	RC3H1	95	98.206	Phascolarctos_cinereus
ENSECAG00000021208	RC3H1	100	92.321	ENSPPYG00000000490	RC3H1	98	96.622	Pongo_abelii
ENSECAG00000021208	RC3H1	80	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSECAG00000021208	RC3H1	82	94.866	ENSPCOG00000021795	RC3H1	96	94.866	Propithecus_coquereli
ENSECAG00000021208	RC3H1	94	99.609	ENSPVAG00000007593	RC3H1	100	86.396	Pteropus_vampyrus
ENSECAG00000021208	RC3H1	97	61.934	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSECAG00000021208	RC3H1	100	95.855	ENSRBIG00000037743	RC3H1	100	95.855	Rhinopithecus_bieti
ENSECAG00000021208	RC3H1	100	95.763	ENSRROG00000036546	RC3H1	100	95.763	Rhinopithecus_roxellana
ENSECAG00000021208	RC3H1	93	96.096	ENSSBOG00000010664	RC3H1	100	96.096	Saimiri_boliviensis_boliviensis
ENSECAG00000021208	RC3H1	100	89.956	ENSSHAG00000007589	RC3H1	100	90.044	Sarcophilus_harrisii
ENSECAG00000021208	RC3H1	87	86.486	ENSSARG00000004660	RC3H1	86	86.486	Sorex_araneus
ENSECAG00000021208	RC3H1	100	82.559	ENSSPUG00000018472	RC3H1	100	82.018	Sphenodon_punctatus
ENSECAG00000021208	RC3H1	100	96.438	ENSSSCG00000015498	RC3H1	100	96.438	Sus_scrofa
ENSECAG00000021208	RC3H1	100	86.128	ENSTGUG00000004090	RC3H1	100	85.413	Taeniopygia_guttata
ENSECAG00000021208	RC3H1	90	96.322	ENSTBEG00000005015	RC3H1	88	96.322	Tupaia_belangeri
ENSECAG00000021208	RC3H1	100	96.859	ENSTTRG00000008572	RC3H1	100	95.330	Tursiops_truncatus
ENSECAG00000021208	RC3H1	100	94.876	ENSUAMG00000019525	RC3H1	100	94.876	Ursus_americanus
ENSECAG00000021208	RC3H1	100	95.410	ENSUMAG00000020087	RC3H1	100	95.410	Ursus_maritimus
ENSECAG00000021208	RC3H1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSECAG00000021208	RC3H1	100	95.246	ENSVVUG00000014201	RC3H1	100	95.246	Vulpes_vulpes
ENSECAG00000021208	RC3H1	100	77.700	ENSXETG00000020030	rc3h1	100	77.594	Xenopus_tropicalis