EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000021318 (Gene tree)
Gene ID: 100072388
Gene Symbol: PRPF8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 27110 bases
Position: chr11:45651788-45678897
Accession: 21891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000018808	RRM_4	PF10598.9	4.6e-48	1	1
ENSECAP00000018808	U5_2-snRNA_bdg	PF10597.9	9.2e-74	1	1
ENSECAP00000018808	PRO8NT	PF08082.11	3.7e-85	1	1
ENSECAP00000018808	U6-snRNA_bdg	PF10596.9	2.2e-89	1	1
ENSECAP00000018808	PROCN	PF08083.11	2.4e-235	1	1
ENSECAP00000018808	PRP8_domainIV	PF12134.8	4.7e-130	1	1
ENSECAP00000018808	PROCT	PF08084.11	1.9e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000022742	-	7563	XM_001504332	ENSECAP00000018808	2275 (aa)	XP_001504382	F6RNK0

Gene Model

Click here to download ENSECAG00000021318's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000021318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000021318	PRPF8	100	100.000	ENSG00000174231	PRPF8	97	100.000	Homo_sapiens
ENSECAG00000021318	PRPF8	100	98.286	ENSAPOG00000010079	prpf8	97	98.286	Acanthochromis_polyacanthus
ENSECAG00000021318	PRPF8	100	100.000	ENSAMEG00000007940	PRPF8	97	100.000	Ailuropoda_melanoleuca
ENSECAG00000021318	PRPF8	100	96.798	ENSACIG00000018280	prpf8	97	96.798	Amphilophus_citrinellus
ENSECAG00000021318	PRPF8	100	98.286	ENSAOCG00000010725	prpf8	97	98.286	Amphiprion_ocellaris
ENSECAG00000021318	PRPF8	100	98.286	ENSAPEG00000014397	prpf8	97	98.286	Amphiprion_percula
ENSECAG00000021318	PRPF8	100	97.714	ENSATEG00000010062	prpf8	97	97.714	Anabas_testudineus
ENSECAG00000021318	PRPF8	99	99.555	ENSAPLG00000010357	PRPF8	100	99.555	Anas_platyrhynchos
ENSECAG00000021318	PRPF8	82	97.768	ENSACAG00000014784	PRPF8	97	97.768	Anolis_carolinensis
ENSECAG00000021318	PRPF8	100	100.000	ENSANAG00000032629	PRPF8	97	100.000	Aotus_nancymaae
ENSECAG00000021318	PRPF8	100	98.330	ENSACLG00000020858	prpf8	99	98.330	Astatotilapia_calliptera
ENSECAG00000021318	PRPF8	100	98.110	ENSAMXG00000020291	prpf8	98	98.110	Astyanax_mexicanus
ENSECAG00000021318	PRPF8	100	100.000	ENSBTAG00000011488	PRPF8	97	100.000	Bos_taurus
ENSECAG00000021318	PRPF8	100	87.155	WBGene00004187	prp-8	98	87.242	Caenorhabditis_elegans
ENSECAG00000021318	PRPF8	100	100.000	ENSCJAG00000001911	PRPF8	97	100.000	Callithrix_jacchus
ENSECAG00000021318	PRPF8	100	100.000	ENSCAFG00000019221	PRPF8	97	100.000	Canis_familiaris
ENSECAG00000021318	PRPF8	99	100.000	ENSCAFG00020009943	PRPF8	100	100.000	Canis_lupus_dingo
ENSECAG00000021318	PRPF8	100	100.000	ENSCHIG00000017499	PRPF8	97	100.000	Capra_hircus
ENSECAG00000021318	PRPF8	100	100.000	ENSTSYG00000014120	PRPF8	97	100.000	Carlito_syrichta
ENSECAG00000021318	PRPF8	99	97.773	ENSCAPG00000009459	PRPF8	99	97.773	Cavia_aperea
ENSECAG00000021318	PRPF8	100	100.000	ENSCPOG00000010379	PRPF8	97	100.000	Cavia_porcellus
ENSECAG00000021318	PRPF8	100	100.000	ENSCCAG00000031983	-	97	100.000	Cebus_capucinus
ENSECAG00000021318	PRPF8	100	100.000	ENSCATG00000038595	PRPF8	97	100.000	Cercocebus_atys
ENSECAG00000021318	PRPF8	100	100.000	ENSCLAG00000004388	PRPF8	97	100.000	Chinchilla_lanigera
ENSECAG00000021318	PRPF8	100	100.000	ENSCSAG00000013929	PRPF8	97	100.000	Chlorocebus_sabaeus
ENSECAG00000021318	PRPF8	81	99.688	ENSCHOG00000008590	PRPF8	85	99.688	Choloepus_hoffmanni
ENSECAG00000021318	PRPF8	100	99.692	ENSCPBG00000020409	PRPF8	97	99.692	Chrysemys_picta_bellii
ENSECAG00000021318	PRPF8	100	92.874	ENSCSAVG00000007825	-	99	91.276	Ciona_savignyi
ENSECAG00000021318	PRPF8	100	100.000	ENSCANG00000043088	PRPF8	97	100.000	Colobus_angolensis_palliatus
ENSECAG00000021318	PRPF8	76	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSECAG00000021318	PRPF8	100	98.154	ENSCSEG00000007905	prpf8	97	98.154	Cynoglossus_semilaevis
ENSECAG00000021318	PRPF8	100	98.242	ENSDARG00000026180	prpf8	97	98.242	Danio_rerio
ENSECAG00000021318	PRPF8	93	99.953	ENSDNOG00000018471	PRPF8	96	99.953	Dasypus_novemcinctus
ENSECAG00000021318	PRPF8	83	99.407	ENSDORG00000006185	Prpf8	93	99.407	Dipodomys_ordii
ENSECAG00000021318	PRPF8	100	92.139	FBgn0033688	Prp8	95	92.139	Drosophila_melanogaster
ENSECAG00000021318	PRPF8	100	94.374	ENSETEG00000017592	PRPF8	97	94.374	Echinops_telfairi
ENSECAG00000021318	PRPF8	100	94.376	ENSEBUG00000006548	prpf8	97	94.376	Eptatretus_burgeri
ENSECAG00000021318	PRPF8	100	100.000	ENSEASG00005009514	PRPF8	97	100.000	Equus_asinus_asinus
ENSECAG00000021318	PRPF8	66	100.000	ENSEEUG00000012120	-	64	100.000	Erinaceus_europaeus
ENSECAG00000021318	PRPF8	98	96.989	ENSELUG00000007120	prpf8	96	96.989	Esox_lucius
ENSECAG00000021318	PRPF8	100	100.000	ENSFCAG00000006297	PRPF8	97	100.000	Felis_catus
ENSECAG00000021318	PRPF8	100	99.692	ENSFALG00000006628	PRPF8	97	99.692	Ficedula_albicollis
ENSECAG00000021318	PRPF8	100	100.000	ENSFDAG00000004711	PRPF8	97	100.000	Fukomys_damarensis
ENSECAG00000021318	PRPF8	100	97.934	ENSFHEG00000021084	prpf8	97	97.934	Fundulus_heteroclitus
ENSECAG00000021318	PRPF8	100	95.871	ENSGMOG00000002028	prpf8	97	95.871	Gadus_morhua
ENSECAG00000021318	PRPF8	100	99.692	ENSGALG00000002943	PRPF8	97	99.692	Gallus_gallus
ENSECAG00000021318	PRPF8	100	98.066	ENSGAFG00000010337	prpf8	97	98.066	Gambusia_affinis
ENSECAG00000021318	PRPF8	100	98.022	ENSGACG00000008504	prpf8	98	97.550	Gasterosteus_aculeatus
ENSECAG00000021318	PRPF8	100	99.692	ENSGAGG00000008350	PRPF8	97	99.692	Gopherus_agassizii
ENSECAG00000021318	PRPF8	100	100.000	ENSGGOG00000005516	PRPF8	97	100.000	Gorilla_gorilla
ENSECAG00000021318	PRPF8	100	98.374	ENSHBUG00000016192	prpf8	98	98.374	Haplochromis_burtoni
ENSECAG00000021318	PRPF8	100	100.000	ENSHGLG00000012029	PRPF8	97	100.000	Heterocephalus_glaber_female
ENSECAG00000021318	PRPF8	100	100.000	ENSHGLG00100016494	PRPF8	97	100.000	Heterocephalus_glaber_male
ENSECAG00000021318	PRPF8	100	98.110	ENSHCOG00000016414	prpf8	97	98.110	Hippocampus_comes
ENSECAG00000021318	PRPF8	100	98.066	ENSIPUG00000023230	prpf8	97	98.066	Ictalurus_punctatus
ENSECAG00000021318	PRPF8	100	100.000	ENSSTOG00000005128	PRPF8	97	100.000	Ictidomys_tridecemlineatus
ENSECAG00000021318	PRPF8	100	97.758	ENSJJAG00000021159	Prpf8	97	97.758	Jaculus_jaculus
ENSECAG00000021318	PRPF8	100	98.198	ENSKMAG00000016118	prpf8	97	98.198	Kryptolebias_marmoratus
ENSECAG00000021318	PRPF8	100	97.978	ENSLBEG00000026903	prpf8	97	97.978	Labrus_bergylta
ENSECAG00000021318	PRPF8	95	96.381	ENSLACG00000010479	PRPF8	99	98.551	Latimeria_chalumnae
ENSECAG00000021318	PRPF8	100	98.286	ENSLOCG00000005409	prpf8	97	98.286	Lepisosteus_oculatus
ENSECAG00000021318	PRPF8	100	100.000	ENSLAFG00000015445	PRPF8	97	100.000	Loxodonta_africana
ENSECAG00000021318	PRPF8	100	100.000	ENSMFAG00000039995	PRPF8	97	100.000	Macaca_fascicularis
ENSECAG00000021318	PRPF8	100	100.000	ENSMMUG00000004820	PRPF8	97	100.000	Macaca_mulatta
ENSECAG00000021318	PRPF8	100	100.000	ENSMNEG00000035713	PRPF8	97	100.000	Macaca_nemestrina
ENSECAG00000021318	PRPF8	100	100.000	ENSMLEG00000037937	PRPF8	97	100.000	Mandrillus_leucophaeus
ENSECAG00000021318	PRPF8	100	98.198	ENSMAMG00000008919	prpf8	97	98.198	Mastacembelus_armatus
ENSECAG00000021318	PRPF8	100	98.330	ENSMZEG00005015073	prpf8	97	98.330	Maylandia_zebra
ENSECAG00000021318	PRPF8	100	99.692	ENSMGAG00000004769	PRPF8	97	99.692	Meleagris_gallopavo
ENSECAG00000021318	PRPF8	100	99.956	ENSMICG00000010320	PRPF8	97	99.956	Microcebus_murinus
ENSECAG00000021318	PRPF8	100	99.956	ENSMOCG00000016838	Prpf8	97	99.956	Microtus_ochrogaster
ENSECAG00000021318	PRPF8	100	97.758	ENSMMOG00000011887	prpf8	97	97.758	Mola_mola
ENSECAG00000021318	PRPF8	100	99.868	ENSMODG00000010480	PRPF8	97	99.868	Monodelphis_domestica
ENSECAG00000021318	PRPF8	97	97.713	ENSMALG00000003558	prpf8	97	97.713	Monopterus_albus
ENSECAG00000021318	PRPF8	100	99.912	MGP_CAROLIEiJ_G0016740	Prpf8	97	99.912	Mus_caroli
ENSECAG00000021318	PRPF8	100	99.912	ENSMUSG00000020850	Prpf8	97	99.912	Mus_musculus
ENSECAG00000021318	PRPF8	100	99.824	MGP_PahariEiJ_G0017877	Prpf8	97	99.824	Mus_pahari
ENSECAG00000021318	PRPF8	100	99.912	MGP_SPRETEiJ_G0017583	Prpf8	97	99.912	Mus_spretus
ENSECAG00000021318	PRPF8	100	100.000	ENSMPUG00000013227	PRPF8	97	100.000	Mustela_putorius_furo
ENSECAG00000021318	PRPF8	100	99.781	ENSMLUG00000002666	PRPF8	97	99.781	Myotis_lucifugus
ENSECAG00000021318	PRPF8	100	98.154	ENSNGAG00000005305	Prpf8	97	98.154	Nannospalax_galili
ENSECAG00000021318	PRPF8	100	98.374	ENSNBRG00000013127	prpf8	97	98.374	Neolamprologus_brichardi
ENSECAG00000021318	PRPF8	97	97.695	ENSNLEG00000000897	PRPF8	95	97.695	Nomascus_leucogenys
ENSECAG00000021318	PRPF8	100	98.022	ENSMEUG00000015999	PRPF8	99	98.022	Notamacropus_eugenii
ENSECAG00000021318	PRPF8	100	98.989	ENSOPRG00000003102	PRPF8	98	98.989	Ochotona_princeps
ENSECAG00000021318	PRPF8	100	100.000	ENSODEG00000008468	PRPF8	97	100.000	Octodon_degus
ENSECAG00000021318	PRPF8	100	98.418	ENSONIG00000008153	prpf8	97	98.418	Oreochromis_niloticus
ENSECAG00000021318	PRPF8	84	99.720	ENSOANG00000004250	PRPF8	97	99.720	Ornithorhynchus_anatinus
ENSECAG00000021318	PRPF8	100	100.000	ENSOCUG00000000081	PRPF8	97	100.000	Oryctolagus_cuniculus
ENSECAG00000021318	PRPF8	100	98.154	ENSORLG00000008036	prpf8	97	98.154	Oryzias_latipes
ENSECAG00000021318	PRPF8	100	98.111	ENSORLG00020021070	prpf8	97	98.111	Oryzias_latipes_hni
ENSECAG00000021318	PRPF8	100	98.154	ENSORLG00015002340	prpf8	97	98.154	Oryzias_latipes_hsok
ENSECAG00000021318	PRPF8	100	96.527	ENSOMEG00000016866	prpf8	97	96.527	Oryzias_melastigma
ENSECAG00000021318	PRPF8	100	99.868	ENSOARG00000013312	PRPF8	97	99.868	Ovis_aries
ENSECAG00000021318	PRPF8	100	100.000	ENSPPAG00000042753	PRPF8	97	100.000	Pan_paniscus
ENSECAG00000021318	PRPF8	100	100.000	ENSPPRG00000008746	PRPF8	97	100.000	Panthera_pardus
ENSECAG00000021318	PRPF8	100	99.912	ENSPTIG00000019200	PRPF8	97	99.912	Panthera_tigris_altaica
ENSECAG00000021318	PRPF8	100	100.000	ENSPTRG00000039576	PRPF8	97	100.000	Pan_troglodytes
ENSECAG00000021318	PRPF8	100	100.000	ENSPANG00000024607	PRPF8	97	100.000	Papio_anubis
ENSECAG00000021318	PRPF8	100	98.374	ENSPKIG00000011201	prpf8	97	98.374	Paramormyrops_kingsleyae
ENSECAG00000021318	PRPF8	100	99.648	ENSPSIG00000013393	PRPF8	97	99.648	Pelodiscus_sinensis
ENSECAG00000021318	PRPF8	100	99.956	ENSPEMG00000021699	Prpf8	97	99.956	Peromyscus_maniculatus_bairdii
ENSECAG00000021318	PRPF8	99	93.853	ENSPMAG00000005438	prpf8	100	93.898	Petromyzon_marinus
ENSECAG00000021318	PRPF8	100	99.868	ENSPCIG00000022603	PRPF8	100	99.866	Phascolarctos_cinereus
ENSECAG00000021318	PRPF8	100	98.198	ENSPFOG00000007005	prpf8	96	98.198	Poecilia_formosa
ENSECAG00000021318	PRPF8	100	96.747	ENSPLAG00000020777	prpf8	98	96.747	Poecilia_latipinna
ENSECAG00000021318	PRPF8	100	98.198	ENSPMEG00000004051	prpf8	98	96.747	Poecilia_mexicana
ENSECAG00000021318	PRPF8	100	98.022	ENSPREG00000021902	prpf8	98	98.022	Poecilia_reticulata
ENSECAG00000021318	PRPF8	100	100.000	ENSPPYG00000007777	PRPF8	97	100.000	Pongo_abelii
ENSECAG00000021318	PRPF8	90	99.620	ENSPCAG00000008938	PRPF8	87	99.620	Procavia_capensis
ENSECAG00000021318	PRPF8	100	99.956	ENSPCOG00000015182	PRPF8	97	99.956	Propithecus_coquereli
ENSECAG00000021318	PRPF8	93	100.000	ENSPVAG00000002134	PRPF8	90	100.000	Pteropus_vampyrus
ENSECAG00000021318	PRPF8	100	98.374	ENSPNYG00000016356	prpf8	98	98.374	Pundamilia_nyererei
ENSECAG00000021318	PRPF8	100	98.198	ENSPNAG00000009247	prpf8	97	98.198	Pygocentrus_nattereri
ENSECAG00000021318	PRPF8	100	99.912	ENSRNOG00000003495	Prpf8	97	99.912	Rattus_norvegicus
ENSECAG00000021318	PRPF8	100	100.000	ENSRBIG00000031219	PRPF8	100	99.554	Rhinopithecus_bieti
ENSECAG00000021318	PRPF8	100	100.000	ENSRROG00000038014	PRPF8	100	99.554	Rhinopithecus_roxellana
ENSECAG00000021318	PRPF8	100	62.887	YHR165C	PRP8	94	62.931	Saccharomyces_cerevisiae
ENSECAG00000021318	PRPF8	100	100.000	ENSSBOG00000029717	PRPF8	97	100.000	Saimiri_boliviensis_boliviensis
ENSECAG00000021318	PRPF8	100	99.824	ENSSHAG00000006167	PRPF8	97	99.824	Sarcophilus_harrisii
ENSECAG00000021318	PRPF8	100	98.242	ENSSFOG00015013905	prpf8	97	98.242	Scleropages_formosus
ENSECAG00000021318	PRPF8	100	98.022	ENSSMAG00000017736	prpf8	97	98.022	Scophthalmus_maximus
ENSECAG00000021318	PRPF8	100	98.286	ENSSDUG00000003029	prpf8	97	98.286	Seriola_dumerili
ENSECAG00000021318	PRPF8	70	98.936	ENSSLDG00000017096	prpf8	100	98.936	Seriola_lalandi_dorsalis
ENSECAG00000021318	PRPF8	87	99.334	ENSSARG00000002892	PRPF8	85	99.334	Sorex_araneus
ENSECAG00000021318	PRPF8	100	99.473	ENSSPUG00000007463	PRPF8	97	99.473	Sphenodon_punctatus
ENSECAG00000021318	PRPF8	100	97.670	ENSSPAG00000015639	prpf8	97	97.670	Stegastes_partitus
ENSECAG00000021318	PRPF8	100	100.000	ENSSSCG00000017817	PRPF8	97	100.000	Sus_scrofa
ENSECAG00000021318	PRPF8	53	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSECAG00000021318	PRPF8	100	99.692	ENSTGUG00000005648	-	97	99.692	Taeniopygia_guttata
ENSECAG00000021318	PRPF8	100	98.022	ENSTRUG00000015906	prpf8	97	98.022	Takifugu_rubripes
ENSECAG00000021318	PRPF8	94	98.746	ENSTNIG00000003460	prpf8	96	98.746	Tetraodon_nigroviridis
ENSECAG00000021318	PRPF8	91	99.932	ENSTBEG00000006431	PRPF8	89	99.932	Tupaia_belangeri
ENSECAG00000021318	PRPF8	100	99.385	ENSTTRG00000006869	PRPF8	97	99.385	Tursiops_truncatus
ENSECAG00000021318	PRPF8	53	99.337	ENSUAMG00000015644	-	92	99.337	Ursus_americanus
ENSECAG00000021318	PRPF8	100	99.736	ENSUMAG00000009385	PRPF8	97	99.736	Ursus_maritimus
ENSECAG00000021318	PRPF8	69	100.000	ENSVPAG00000006063	-	67	100.000	Vicugna_pacos
ENSECAG00000021318	PRPF8	100	100.000	ENSVVUG00000021695	PRPF8	96	100.000	Vulpes_vulpes
ENSECAG00000021318	PRPF8	100	99.121	ENSXETG00000022259	prpf8	97	99.121	Xenopus_tropicalis
ENSECAG00000021318	PRPF8	100	98.110	ENSXCOG00000012775	prpf8	97	98.110	Xiphophorus_couchianus
ENSECAG00000021318	PRPF8	100	98.066	ENSXMAG00000008505	prpf8	97	98.066	Xiphophorus_maculatus