EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000021369 (Gene tree)
Gene ID: 100070514
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 116618 bases
Position: chr2:25461932-25578549
Accession: 22044
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000031375	PUF	PF00806.19	2.5e-71	1	8
ENSECAP00000031375	PUF	PF00806.19	2.5e-71	2	8
ENSECAP00000031375	PUF	PF00806.19	2.5e-71	3	8
ENSECAP00000031375	PUF	PF00806.19	2.5e-71	4	8
ENSECAP00000031375	PUF	PF00806.19	2.5e-71	5	8
ENSECAP00000031375	PUF	PF00806.19	2.5e-71	6	8
ENSECAP00000031375	PUF	PF00806.19	2.5e-71	7	8
ENSECAP00000031375	PUF	PF00806.19	2.5e-71	8	8
ENSECAP00000018948	PUF	PF00806.19	4e-71	1	8
ENSECAP00000018948	PUF	PF00806.19	4e-71	2	8
ENSECAP00000018948	PUF	PF00806.19	4e-71	3	8
ENSECAP00000018948	PUF	PF00806.19	4e-71	4	8
ENSECAP00000018948	PUF	PF00806.19	4e-71	5	8
ENSECAP00000018948	PUF	PF00806.19	4e-71	6	8
ENSECAP00000018948	PUF	PF00806.19	4e-71	7	8
ENSECAP00000018948	PUF	PF00806.19	4e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000022900	-	3581	-	ENSECAP00000018948	1189 (aa)	XP_023490471	F6Q912
ENSECAT00000040820	-	3386	-	ENSECAP00000031375	1124 (aa)	-	-

Gene Model

Click here to download ENSECAG00000021369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000021369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000021369	PUM1	86	87.119	ENSECAG00000021930	PUM2	100	88.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000021369	PUM1	100	99.159	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSECAG00000021369	PUM1	90	91.084	ENSAPOG00000021632	pum1	100	90.602	Acanthochromis_polyacanthus
ENSECAG00000021369	PUM1	100	99.244	ENSAMEG00000017656	PUM1	97	99.244	Ailuropoda_melanoleuca
ENSECAG00000021369	PUM1	100	74.502	ENSACIG00000021013	pum1	100	76.427	Amphilophus_citrinellus
ENSECAG00000021369	PUM1	90	91.084	ENSAOCG00000003944	pum1	100	77.220	Amphiprion_ocellaris
ENSECAG00000021369	PUM1	90	91.084	ENSAPEG00000014550	pum1	100	77.220	Amphiprion_percula
ENSECAG00000021369	PUM1	90	91.084	ENSATEG00000016004	pum1	100	90.602	Anabas_testudineus
ENSECAG00000021369	PUM1	100	97.309	ENSAPLG00000009351	PUM1	100	97.309	Anas_platyrhynchos
ENSECAG00000021369	PUM1	100	95.290	ENSACAG00000000682	PUM1	98	95.290	Anolis_carolinensis
ENSECAG00000021369	PUM1	100	98.907	ENSANAG00000027865	PUM1	100	99.306	Aotus_nancymaae
ENSECAG00000021369	PUM1	90	76.481	ENSACLG00000019354	pum1	100	78.835	Astatotilapia_calliptera
ENSECAG00000021369	PUM1	100	78.446	ENSAMXG00000020607	pum1	96	78.947	Astyanax_mexicanus
ENSECAG00000021369	PUM1	100	98.991	ENSBTAG00000018979	PUM1	100	99.517	Bos_taurus
ENSECAG00000021369	PUM1	100	99.243	ENSCJAG00000006035	PUM1	100	99.306	Callithrix_jacchus
ENSECAG00000021369	PUM1	100	97.056	ENSCAFG00000011205	PUM1	100	97.056	Canis_familiaris
ENSECAG00000021369	PUM1	92	97.179	ENSCAFG00020024616	PUM1	99	98.672	Canis_lupus_dingo
ENSECAG00000021369	PUM1	100	98.991	ENSCHIG00000012952	PUM1	100	99.034	Capra_hircus
ENSECAG00000021369	PUM1	100	98.823	ENSTSYG00000008868	PUM1	100	98.823	Carlito_syrichta
ENSECAG00000021369	PUM1	100	98.654	ENSCPOG00000031613	PUM1	100	98.654	Cavia_porcellus
ENSECAG00000021369	PUM1	100	96.804	ENSCATG00000017991	PUM1	100	99.306	Cercocebus_atys
ENSECAG00000021369	PUM1	100	98.738	ENSCLAG00000007662	PUM1	100	98.738	Chinchilla_lanigera
ENSECAG00000021369	PUM1	100	98.250	ENSCSAG00000001028	PUM1	100	98.250	Chlorocebus_sabaeus
ENSECAG00000021369	PUM1	93	95.690	ENSCHOG00000010245	PUM1	93	95.690	Choloepus_hoffmanni
ENSECAG00000021369	PUM1	100	97.309	ENSCPBG00000009288	PUM1	100	98.068	Chrysemys_picta_bellii
ENSECAG00000021369	PUM1	100	99.075	ENSCANG00000042606	PUM1	100	99.306	Colobus_angolensis_palliatus
ENSECAG00000021369	PUM1	100	98.234	ENSCGRG00001024949	Pum1	100	98.611	Cricetulus_griseus_chok1gshd
ENSECAG00000021369	PUM1	100	98.234	ENSCGRG00000014197	Pum1	100	98.611	Cricetulus_griseus_crigri
ENSECAG00000021369	PUM1	90	76.111	ENSCSEG00000015981	pum1	100	77.706	Cynoglossus_semilaevis
ENSECAG00000021369	PUM1	100	73.863	ENSCVAG00000007043	pum1	100	75.805	Cyprinodon_variegatus
ENSECAG00000021369	PUM1	100	79.114	ENSDARG00000099256	pum1	100	79.365	Danio_rerio
ENSECAG00000021369	PUM1	100	98.738	ENSDNOG00000010939	PUM1	100	98.738	Dasypus_novemcinctus
ENSECAG00000021369	PUM1	85	98.309	ENSDORG00000001875	Pum1	100	98.309	Dipodomys_ordii
ENSECAG00000021369	PUM1	88	93.366	ENSETEG00000004355	PUM1	87	93.366	Echinops_telfairi
ENSECAG00000021369	PUM1	100	99.832	ENSEASG00005010813	PUM1	100	99.832	Equus_asinus_asinus
ENSECAG00000021369	PUM1	81	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSECAG00000021369	PUM1	100	76.398	ENSELUG00000002409	pum1	100	83.787	Esox_lucius
ENSECAG00000021369	PUM1	100	99.327	ENSFCAG00000010374	PUM1	100	99.583	Felis_catus
ENSECAG00000021369	PUM1	100	95.812	ENSFALG00000001214	PUM1	97	94.807	Ficedula_albicollis
ENSECAG00000021369	PUM1	100	98.654	ENSFDAG00000011319	PUM1	100	98.654	Fukomys_damarensis
ENSECAG00000021369	PUM1	94	88.783	ENSGMOG00000010491	pum1	100	74.752	Gadus_morhua
ENSECAG00000021369	PUM1	100	97.561	ENSGALG00000042598	PUM1	99	98.785	Gallus_gallus
ENSECAG00000021369	PUM1	89	87.356	ENSGAFG00000015617	pum1	99	89.880	Gambusia_affinis
ENSECAG00000021369	PUM1	100	74.670	ENSGACG00000005717	pum1	100	76.277	Gasterosteus_aculeatus
ENSECAG00000021369	PUM1	100	97.140	ENSGAGG00000001290	PUM1	99	98.583	Gopherus_agassizii
ENSECAG00000021369	PUM1	100	99.075	ENSGGOG00000011983	PUM1	100	99.306	Gorilla_gorilla
ENSECAG00000021369	PUM1	100	74.194	ENSHBUG00000018718	pum1	100	76.218	Haplochromis_burtoni
ENSECAG00000021369	PUM1	100	98.486	ENSHGLG00000013819	Pum1	100	98.486	Heterocephalus_glaber_female
ENSECAG00000021369	PUM1	100	98.486	ENSHGLG00100008621	Pum1	100	98.486	Heterocephalus_glaber_male
ENSECAG00000021369	PUM1	90	75.116	ENSHCOG00000005149	pum1	100	71.959	Hippocampus_comes
ENSECAG00000021369	PUM1	100	77.140	ENSIPUG00000020421	pum1	100	77.990	Ictalurus_punctatus
ENSECAG00000021369	PUM1	100	98.991	ENSSTOG00000010757	PUM1	100	99.306	Ictidomys_tridecemlineatus
ENSECAG00000021369	PUM1	100	98.570	ENSJJAG00000000530	Pum1	100	99.306	Jaculus_jaculus
ENSECAG00000021369	PUM1	100	73.863	ENSKMAG00000003481	pum1	100	75.805	Kryptolebias_marmoratus
ENSECAG00000021369	PUM1	100	73.571	ENSLBEG00000002527	pum1	100	75.765	Labrus_bergylta
ENSECAG00000021369	PUM1	100	86.428	ENSLACG00000017188	PUM1	99	86.595	Latimeria_chalumnae
ENSECAG00000021369	PUM1	100	88.063	ENSLOCG00000005210	pum1	99	88.230	Lepisosteus_oculatus
ENSECAG00000021369	PUM1	100	98.654	ENSLAFG00000003178	PUM1	100	98.654	Loxodonta_africana
ENSECAG00000021369	PUM1	100	98.826	ENSMFAG00000010291	PUM1	100	99.306	Macaca_fascicularis
ENSECAG00000021369	PUM1	100	98.826	ENSMMUG00000013520	PUM1	100	99.306	Macaca_mulatta
ENSECAG00000021369	PUM1	100	99.075	ENSMNEG00000034639	PUM1	100	99.306	Macaca_nemestrina
ENSECAG00000021369	PUM1	100	99.075	ENSMLEG00000038743	PUM1	100	99.306	Mandrillus_leucophaeus
ENSECAG00000021369	PUM1	100	74.442	ENSMAMG00000011606	pum1	100	76.466	Mastacembelus_armatus
ENSECAG00000021369	PUM1	100	74.194	ENSMZEG00005005834	pum1	100	76.218	Maylandia_zebra
ENSECAG00000021369	PUM1	100	97.309	ENSMGAG00000000724	PUM1	100	97.309	Meleagris_gallopavo
ENSECAG00000021369	PUM1	100	98.570	ENSMAUG00000022090	Pum1	100	98.611	Mesocricetus_auratus
ENSECAG00000021369	PUM1	99	96.799	ENSMICG00000012213	-	99	96.799	Microcebus_murinus
ENSECAG00000021369	PUM1	100	98.991	ENSMICG00000007713	-	100	98.991	Microcebus_murinus
ENSECAG00000021369	PUM1	100	98.486	ENSMOCG00000015463	Pum1	100	98.486	Microtus_ochrogaster
ENSECAG00000021369	PUM1	90	87.816	ENSMMOG00000019817	pum1	100	90.361	Mola_mola
ENSECAG00000021369	PUM1	100	97.481	ENSMODG00000017067	PUM1	100	97.481	Monodelphis_domestica
ENSECAG00000021369	PUM1	90	88.046	ENSMALG00000016399	pum1	100	90.602	Monopterus_albus
ENSECAG00000021369	PUM1	100	98.234	MGP_CAROLIEiJ_G0026549	Pum1	100	98.234	Mus_caroli
ENSECAG00000021369	PUM1	100	98.486	ENSMUSG00000028580	Pum1	100	98.611	Mus_musculus
ENSECAG00000021369	PUM1	100	98.318	MGP_PahariEiJ_G0028881	Pum1	100	98.611	Mus_pahari
ENSECAG00000021369	PUM1	100	98.402	MGP_SPRETEiJ_G0027529	Pum1	100	98.611	Mus_spretus
ENSECAG00000021369	PUM1	100	98.907	ENSMPUG00000015454	PUM1	100	98.907	Mustela_putorius_furo
ENSECAG00000021369	PUM1	100	98.738	ENSMLUG00000006490	PUM1	100	98.738	Myotis_lucifugus
ENSECAG00000021369	PUM1	100	98.991	ENSNGAG00000002378	Pum1	100	98.991	Nannospalax_galili
ENSECAG00000021369	PUM1	84	81.312	ENSNBRG00000010689	pum1	100	83.580	Neolamprologus_brichardi
ENSECAG00000021369	PUM1	100	97.813	ENSNLEG00000001151	PUM1	100	98.611	Nomascus_leucogenys
ENSECAG00000021369	PUM1	81	100.000	ENSMEUG00000000976	-	82	96.284	Notamacropus_eugenii
ENSECAG00000021369	PUM1	84	99.065	ENSOPRG00000001776	PUM1	76	99.065	Ochotona_princeps
ENSECAG00000021369	PUM1	100	98.486	ENSODEG00000003465	PUM1	100	98.486	Octodon_degus
ENSECAG00000021369	PUM1	100	74.775	ENSONIG00000002290	pum1	100	76.548	Oreochromis_niloticus
ENSECAG00000021369	PUM1	81	77.426	ENSOANG00000004902	-	100	77.528	Ornithorhynchus_anatinus
ENSECAG00000021369	PUM1	100	98.738	ENSOCUG00000008641	PUM1	99	98.738	Oryctolagus_cuniculus
ENSECAG00000021369	PUM1	100	74.773	ENSORLG00000011482	pum1	100	76.049	Oryzias_latipes
ENSECAG00000021369	PUM1	100	74.856	ENSORLG00020019461	pum1	100	76.049	Oryzias_latipes_hni
ENSECAG00000021369	PUM1	100	74.856	ENSORLG00015011375	pum1	100	76.132	Oryzias_latipes_hsok
ENSECAG00000021369	PUM1	90	92.289	ENSOMEG00000009312	pum1	54	76.641	Oryzias_melastigma
ENSECAG00000021369	PUM1	100	96.138	ENSOGAG00000011063	PUM1	100	96.138	Otolemur_garnettii
ENSECAG00000021369	PUM1	100	98.318	ENSOARG00000001899	PUM1	100	99.034	Ovis_aries
ENSECAG00000021369	PUM1	100	99.075	ENSPPAG00000044003	PUM1	100	99.306	Pan_paniscus
ENSECAG00000021369	PUM1	100	99.243	ENSPPRG00000001370	PUM1	100	99.306	Panthera_pardus
ENSECAG00000021369	PUM1	100	99.075	ENSPTIG00000010798	PUM1	100	99.306	Panthera_tigris_altaica
ENSECAG00000021369	PUM1	100	99.075	ENSPTRG00000000453	PUM1	100	99.306	Pan_troglodytes
ENSECAG00000021369	PUM1	100	99.075	ENSPANG00000016338	PUM1	100	99.306	Papio_anubis
ENSECAG00000021369	PUM1	95	92.995	ENSPKIG00000010578	pum1	100	78.071	Paramormyrops_kingsleyae
ENSECAG00000021369	PUM1	100	97.561	ENSPSIG00000014118	PUM1	100	97.561	Pelodiscus_sinensis
ENSECAG00000021369	PUM1	84	79.657	ENSPMGG00000005836	pum1	100	82.029	Periophthalmus_magnuspinnatus
ENSECAG00000021369	PUM1	100	98.654	ENSPEMG00000010009	Pum1	100	98.654	Peromyscus_maniculatus_bairdii
ENSECAG00000021369	PUM1	100	97.565	ENSPCIG00000014151	PUM1	100	98.068	Phascolarctos_cinereus
ENSECAG00000021369	PUM1	95	77.320	ENSPFOG00000007289	pum1	99	82.569	Poecilia_formosa
ENSECAG00000021369	PUM1	100	73.312	ENSPLAG00000007256	pum1	100	78.261	Poecilia_latipinna
ENSECAG00000021369	PUM1	90	77.348	ENSPMEG00000019543	pum1	99	78.309	Poecilia_mexicana
ENSECAG00000021369	PUM1	100	74.276	ENSPREG00000005195	pum1	100	81.091	Poecilia_reticulata
ENSECAG00000021369	PUM1	100	97.115	ENSPPYG00000001621	PUM1	100	97.115	Pongo_abelii
ENSECAG00000021369	PUM1	77	99.691	ENSPCAG00000001979	PUM1	74	99.691	Procavia_capensis
ENSECAG00000021369	PUM1	100	98.991	ENSPCOG00000004398	PUM1	100	98.991	Propithecus_coquereli
ENSECAG00000021369	PUM1	100	96.888	ENSPVAG00000005207	PUM1	97	96.888	Pteropus_vampyrus
ENSECAG00000021369	PUM1	100	74.276	ENSPNYG00000009518	pum1	100	81.205	Pundamilia_nyererei
ENSECAG00000021369	PUM1	100	78.947	ENSPNAG00000026728	pum1	100	80.396	Pygocentrus_nattereri
ENSECAG00000021369	PUM1	100	98.402	ENSRNOG00000011709	Pum1	100	98.402	Rattus_norvegicus
ENSECAG00000021369	PUM1	100	99.075	ENSRBIG00000042521	PUM1	100	99.306	Rhinopithecus_bieti
ENSECAG00000021369	PUM1	100	99.075	ENSRROG00000020156	PUM1	100	99.306	Rhinopithecus_roxellana
ENSECAG00000021369	PUM1	100	99.159	ENSSBOG00000032037	PUM1	100	99.306	Saimiri_boliviensis_boliviensis
ENSECAG00000021369	PUM1	100	97.397	ENSSHAG00000010918	PUM1	100	97.397	Sarcophilus_harrisii
ENSECAG00000021369	PUM1	90	88.046	ENSSMAG00000010918	pum1	100	90.602	Scophthalmus_maximus
ENSECAG00000021369	PUM1	100	74.276	ENSSDUG00000009021	pum1	100	76.548	Seriola_dumerili
ENSECAG00000021369	PUM1	95	75.934	ENSSLDG00000009667	pum1	100	78.675	Seriola_lalandi_dorsalis
ENSECAG00000021369	PUM1	94	99.558	ENSSARG00000003055	PUM1	91	99.558	Sorex_araneus
ENSECAG00000021369	PUM1	100	96.804	ENSSPUG00000006267	PUM1	100	96.804	Sphenodon_punctatus
ENSECAG00000021369	PUM1	90	91.084	ENSSPAG00000016636	pum1	100	77.220	Stegastes_partitus
ENSECAG00000021369	PUM1	100	99.411	ENSSSCG00000003591	PUM1	100	99.583	Sus_scrofa
ENSECAG00000021369	PUM1	100	74.172	ENSTRUG00000013121	pum1	100	83.210	Takifugu_rubripes
ENSECAG00000021369	PUM1	100	74.668	ENSTNIG00000016983	pum1	99	76.700	Tetraodon_nigroviridis
ENSECAG00000021369	PUM1	87	95.122	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSECAG00000021369	PUM1	92	98.997	ENSTTRG00000007436	PUM1	90	98.997	Tursiops_truncatus
ENSECAG00000021369	PUM1	99	98.710	ENSUAMG00000018262	-	100	98.710	Ursus_americanus
ENSECAG00000021369	PUM1	95	99.517	ENSUMAG00000009211	PUM1	100	99.517	Ursus_maritimus
ENSECAG00000021369	PUM1	98	99.502	ENSVPAG00000005902	PUM1	92	99.502	Vicugna_pacos
ENSECAG00000021369	PUM1	100	99.327	ENSVVUG00000014631	PUM1	100	99.517	Vulpes_vulpes
ENSECAG00000021369	PUM1	100	87.238	ENSXETG00000012904	pum1	99	86.398	Xenopus_tropicalis
ENSECAG00000021369	PUM1	100	73.532	ENSXMAG00000002945	pum1	100	77.950	Xiphophorus_maculatus