EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000021707 (Gene tree)
Gene ID: 100060731
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 42100 bases
Position: chr22:50382980-50425079
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000020058	ResIII	PF04851.15	1.3e-07	1	1
ENSECAP00000019999	ResIII	PF04851.15	1.6e-07	1	1
ENSECAP00000020034	ResIII	PF04851.15	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000024131	-	3998	-	ENSECAP00000020034	1280 (aa)	-	F6ZJG4
ENSECAT00000024093	-	3872	-	ENSECAP00000019999	1238 (aa)	-	F7AWV7
ENSECAT00000024159	-	4105	-	ENSECAP00000020058	1122 (aa)	-	F6ZDN1

Gene Model

Click here to download ENSECAG00000021707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000021707's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000021707	-	51	38.782	ENSECAG00000024392	BRIP1	63	38.782

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000021707	-	99	83.244	ENSG00000258366	RTEL1	100	92.135	Homo_sapiens
ENSECAG00000021707	-	99	83.808	ENSAMEG00000001689	-	99	80.858	Ailuropoda_melanoleuca
ENSECAG00000021707	-	61	39.726	ENSCJAG00000001292	BRIP1	79	39.726	Callithrix_jacchus
ENSECAG00000021707	-	99	82.086	ENSCAFG00020001919	-	99	79.938	Canis_lupus_dingo
ENSECAG00000021707	-	67	41.096	ENSCCAG00000024685	BRIP1	79	41.096	Cebus_capucinus
ENSECAG00000021707	-	58	44.262	ENSCATG00000041725	BRIP1	59	44.262	Cercocebus_atys
ENSECAG00000021707	-	99	81.633	ENSCATG00000013982	-	99	78.566	Cercocebus_atys
ENSECAG00000021707	-	99	77.698	ENSCLAG00000005519	-	99	76.320	Chinchilla_lanigera
ENSECAG00000021707	-	64	44.262	ENSCSAG00000005928	BRIP1	57	44.262	Chlorocebus_sabaeus
ENSECAG00000021707	-	66	44.122	ENSCSAVG00000002028	-	99	44.122	Ciona_savignyi
ENSECAG00000021707	-	58	44.262	ENSCANG00000032026	BRIP1	57	44.262	Colobus_angolensis_palliatus
ENSECAG00000021707	-	99	75.490	ENSDORG00000013483	Rtel1	99	78.586	Dipodomys_ordii
ENSECAG00000021707	-	99	98.750	ENSEASG00005023163	-	99	98.750	Equus_asinus_asinus
ENSECAG00000021707	-	99	65.566	ENSGGOG00000042405	RTEL1	98	65.835	Gorilla_gorilla
ENSECAG00000021707	-	99	77.163	ENSHGLG00000005511	-	99	74.980	Heterocephalus_glaber_female
ENSECAG00000021707	-	99	77.609	ENSHGLG00100002438	-	99	75.450	Heterocephalus_glaber_male
ENSECAG00000021707	-	99	71.416	ENSLAFG00000021665	-	99	69.438	Loxodonta_africana
ENSECAG00000021707	-	99	82.165	ENSMFAG00000043680	-	99	78.995	Macaca_fascicularis
ENSECAG00000021707	-	65	38.356	ENSMFAG00000044136	BRIP1	58	38.356	Macaca_fascicularis
ENSECAG00000021707	-	65	38.356	ENSMMUG00000009027	BRIP1	60	38.356	Macaca_mulatta
ENSECAG00000021707	-	99	77.669	ENSMMUG00000000167	-	99	75.133	Macaca_mulatta
ENSECAG00000021707	-	65	38.356	ENSMNEG00000040728	BRIP1	73	38.356	Macaca_nemestrina
ENSECAG00000021707	-	58	44.262	ENSMLEG00000037601	BRIP1	57	44.262	Mandrillus_leucophaeus
ENSECAG00000021707	-	99	66.548	ENSPPAG00000033509	-	99	63.984	Pan_paniscus
ENSECAG00000021707	-	99	59.322	ENSPTRG00000048787	-	100	58.313	Pan_troglodytes
ENSECAG00000021707	-	58	44.262	ENSPANG00000022169	BRIP1	57	44.262	Papio_anubis
ENSECAG00000021707	-	99	82.165	ENSPANG00000020635	-	99	78.995	Papio_anubis
ENSECAG00000021707	-	99	60.320	ENSPCIG00000017939	-	98	57.920	Phascolarctos_cinereus
ENSECAG00000021707	-	99	81.294	ENSPCOG00000013374	-	99	77.498	Propithecus_coquereli
ENSECAG00000021707	-	99	76.896	ENSRNOG00000027513	Rtel1	99	74.221	Rattus_norvegicus
ENSECAG00000021707	-	58	44.262	ENSRBIG00000024082	BRIP1	58	44.262	Rhinopithecus_bieti
ENSECAG00000021707	-	99	81.867	ENSRROG00000038795	-	99	78.582	Rhinopithecus_roxellana
ENSECAG00000021707	-	58	45.763	ENSSBOG00000035665	BRIP1	72	45.763	Saimiri_boliviensis_boliviensis
ENSECAG00000021707	-	99	82.054	ENSUAMG00000009334	-	96	85.896	Ursus_americanus
ENSECAG00000021707	-	97	76.011	ENSUMAG00000022059	-	99	71.161	Ursus_maritimus
ENSECAG00000021707	-	99	79.572	ENSVVUG00000015049	-	96	79.572	Vulpes_vulpes