EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000021868 (Gene tree)
Gene ID: 100034004
Gene Symbol: NCL
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 121993 bases
Position: chr6:18522500-18644492
Accession: 20593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000019598	RRM_1	PF00076.22	4.6e-58	1	4
ENSECAP00000019598	RRM_1	PF00076.22	4.6e-58	2	4
ENSECAP00000019598	RRM_1	PF00076.22	4.6e-58	3	4
ENSECAP00000019598	RRM_1	PF00076.22	4.6e-58	4	4
ENSECAP00000030198	RRM_1	PF00076.22	6.1e-58	1	4
ENSECAP00000030198	RRM_1	PF00076.22	6.1e-58	2	4
ENSECAP00000030198	RRM_1	PF00076.22	6.1e-58	3	4
ENSECAP00000030198	RRM_1	PF00076.22	6.1e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000065604	-	2280	-	ENSECAP00000030198	759 (aa)	-	-
ENSECAT00000023647	-	2939	-	ENSECAP00000019598	718 (aa)	XP_023498320	F6X3K0

Gene Model

Click here to download ENSECAG00000021868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000021868's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000021868	NCL	62	92.308	ENSG00000115053	NCL	100	90.203	Homo_sapiens
ENSECAG00000021868	NCL	92	91.502	ENSAMEG00000016289	NCL	92	92.564	Ailuropoda_melanoleuca
ENSECAG00000021868	NCL	92	86.474	ENSANAG00000035814	-	100	86.908	Aotus_nancymaae
ENSECAG00000021868	NCL	99	70.198	ENSANAG00000024378	-	85	82.576	Aotus_nancymaae
ENSECAG00000021868	NCL	94	87.281	ENSBTAG00000016174	NCL	92	89.759	Bos_taurus
ENSECAG00000021868	NCL	54	90.984	ENSBTAG00000050728	-	81	90.984	Bos_taurus
ENSECAG00000021868	NCL	77	92.977	ENSBTAG00000026909	-	96	92.977	Bos_taurus
ENSECAG00000021868	NCL	92	84.812	ENSCJAG00000013538	NCL	100	86.069	Callithrix_jacchus
ENSECAG00000021868	NCL	92	92.576	ENSCAFG00000011037	NCL	92	91.667	Canis_familiaris
ENSECAG00000021868	NCL	84	92.422	ENSCAFG00020023145	NCL	97	92.204	Canis_lupus_dingo
ENSECAG00000021868	NCL	92	63.429	ENSCHIG00000012143	-	92	73.636	Capra_hircus
ENSECAG00000021868	NCL	87	97.345	ENSCHIG00000021052	-	94	96.864	Capra_hircus
ENSECAG00000021868	NCL	92	79.669	ENSCHIG00000026149	-	93	81.175	Capra_hircus
ENSECAG00000021868	NCL	85	89.542	ENSCHIG00000010894	-	100	90.030	Capra_hircus
ENSECAG00000021868	NCL	95	83.390	ENSTSYG00000029779	-	98	82.683	Carlito_syrichta
ENSECAG00000021868	NCL	92	85.973	ENSTSYG00000004355	-	92	85.822	Carlito_syrichta
ENSECAG00000021868	NCL	85	67.697	ENSTSYG00000036886	-	86	79.684	Carlito_syrichta
ENSECAG00000021868	NCL	91	77.439	ENSCAPG00000009405	NCL	91	78.234	Cavia_aperea
ENSECAG00000021868	NCL	92	80.514	ENSCPOG00000001034	NCL	92	80.995	Cavia_porcellus
ENSECAG00000021868	NCL	53	96.306	ENSCCAG00000021040	-	100	85.933	Cebus_capucinus
ENSECAG00000021868	NCL	55	87.940	ENSCCAG00000000551	-	76	88.060	Cebus_capucinus
ENSECAG00000021868	NCL	92	88.030	ENSCATG00000037033	NCL	100	89.167	Cercocebus_atys
ENSECAG00000021868	NCL	92	83.560	ENSCLAG00000013080	NCL	100	82.573	Chinchilla_lanigera
ENSECAG00000021868	NCL	61	97.045	ENSCSAG00000006660	NCL	95	97.045	Chlorocebus_sabaeus
ENSECAG00000021868	NCL	61	76.082	ENSCHOG00000012860	NCL	88	76.190	Choloepus_hoffmanni
ENSECAG00000021868	NCL	92	81.392	ENSCGRG00001024315	-	91	80.787	Cricetulus_griseus_chok1gshd
ENSECAG00000021868	NCL	92	67.868	ENSCGRG00001022350	-	95	67.976	Cricetulus_griseus_chok1gshd
ENSECAG00000021868	NCL	92	66.218	ENSCGRG00000000507	-	93	66.364	Cricetulus_griseus_crigri
ENSECAG00000021868	NCL	85	81.613	ENSCGRG00000017894	-	88	81.006	Cricetulus_griseus_crigri
ENSECAG00000021868	NCL	92	85.801	ENSDNOG00000010783	-	92	85.498	Dasypus_novemcinctus
ENSECAG00000021868	NCL	100	75.623	ENSDNOG00000046347	-	99	74.654	Dasypus_novemcinctus
ENSECAG00000021868	NCL	51	73.224	ENSDORG00000023596	-	92	68.750	Dipodomys_ordii
ENSECAG00000021868	NCL	53	83.905	ENSDORG00000012513	-	91	77.390	Dipodomys_ordii
ENSECAG00000021868	NCL	85	61.253	ENSETEG00000008139	-	99	61.806	Echinops_telfairi
ENSECAG00000021868	NCL	53	90.451	ENSETEG00000014756	-	86	90.501	Echinops_telfairi
ENSECAG00000021868	NCL	53	91.053	ENSETEG00000018937	-	85	81.301	Echinops_telfairi
ENSECAG00000021868	NCL	62	61.486	ENSETEG00000008553	-	88	61.486	Echinops_telfairi
ENSECAG00000021868	NCL	98	99.145	ENSEASG00005008488	NCL	100	99.145	Equus_asinus_asinus
ENSECAG00000021868	NCL	85	80.424	ENSEEUG00000005913	NCL	85	78.699	Erinaceus_europaeus
ENSECAG00000021868	NCL	92	90.923	ENSFCAG00000027622	NCL	92	89.864	Felis_catus
ENSECAG00000021868	NCL	91	85.410	ENSFDAG00000014291	NCL	100	84.401	Fukomys_damarensis
ENSECAG00000021868	NCL	62	92.760	ENSGGOG00000004300	NCL	100	89.444	Gorilla_gorilla
ENSECAG00000021868	NCL	56	83.182	ENSHGLG00000005133	-	84	83.186	Heterocephalus_glaber_female
ENSECAG00000021868	NCL	53	93.931	ENSHGLG00000002031	-	100	83.564	Heterocephalus_glaber_female
ENSECAG00000021868	NCL	91	75.038	ENSHGLG00000011069	-	62	79.684	Heterocephalus_glaber_female
ENSECAG00000021868	NCL	53	93.668	ENSHGLG00100014537	-	100	83.011	Heterocephalus_glaber_male
ENSECAG00000021868	NCL	76	80.645	ENSHGLG00100000745	-	82	84.615	Heterocephalus_glaber_male
ENSECAG00000021868	NCL	54	81.841	ENSJJAG00000016165	Ncl	93	76.807	Jaculus_jaculus
ENSECAG00000021868	NCL	91	74.012	ENSLAFG00000013061	NCL	91	72.121	Loxodonta_africana
ENSECAG00000021868	NCL	92	88.485	ENSMFAG00000040385	NCL	100	89.722	Macaca_fascicularis
ENSECAG00000021868	NCL	92	88.485	ENSMMUG00000018094	NCL	100	89.722	Macaca_mulatta
ENSECAG00000021868	NCL	80	98.182	ENSMNEG00000023839	NCL	73	93.426	Macaca_nemestrina
ENSECAG00000021868	NCL	92	88.182	ENSMLEG00000028935	NCL	100	89.306	Mandrillus_leucophaeus
ENSECAG00000021868	NCL	100	87.917	ENSMICG00000002538	-	92	86.515	Microcebus_murinus
ENSECAG00000021868	NCL	92	69.803	ENSMICG00000029975	-	86	80.142	Microcebus_murinus
ENSECAG00000021868	NCL	92	77.879	MGP_CAROLIEiJ_G0014362	Ncl	92	78.030	Mus_caroli
ENSECAG00000021868	NCL	92	78.030	ENSMUSG00000026234	Ncl	92	78.182	Mus_musculus
ENSECAG00000021868	NCL	92	77.424	MGP_PahariEiJ_G0027599	Ncl	92	77.576	Mus_pahari
ENSECAG00000021868	NCL	92	78.485	MGP_SPRETEiJ_G0015164	Ncl	92	78.939	Mus_spretus
ENSECAG00000021868	NCL	92	86.316	ENSMLUG00000014547	NCL	92	86.165	Myotis_lucifugus
ENSECAG00000021868	NCL	92	79.881	ENSNGAG00000002454	-	91	80.301	Nannospalax_galili
ENSECAG00000021868	NCL	71	72.823	ENSNGAG00000006188	-	52	73.879	Nannospalax_galili
ENSECAG00000021868	NCL	86	75.769	ENSNLEG00000014107	-	95	76.812	Nomascus_leucogenys
ENSECAG00000021868	NCL	77	89.655	ENSODEG00000002748	-	91	75.569	Octodon_degus
ENSECAG00000021868	NCL	67	84.746	ENSODEG00000002441	-	88	84.746	Octodon_degus
ENSECAG00000021868	NCL	53	90.186	ENSODEG00000003281	-	91	78.971	Octodon_degus
ENSECAG00000021868	NCL	53	62.671	ENSODEG00000007803	-	90	64.374	Octodon_degus
ENSECAG00000021868	NCL	77	87.335	ENSOGAG00000027852	NCL	83	87.335	Otolemur_garnettii
ENSECAG00000021868	NCL	69	93.103	ENSOARG00000013710	-	73	90.271	Ovis_aries
ENSECAG00000021868	NCL	91	84.370	ENSOARG00000020709	-	92	84.219	Ovis_aries
ENSECAG00000021868	NCL	60	77.880	ENSOARG00000004072	-	71	76.923	Ovis_aries
ENSECAG00000021868	NCL	88	86.598	ENSOARG00000013270	-	100	91.209	Ovis_aries
ENSECAG00000021868	NCL	62	92.534	ENSPPAG00000011619	NCL	100	89.583	Pan_paniscus
ENSECAG00000021868	NCL	92	91.818	ENSPPRG00000012603	NCL	100	91.389	Panthera_pardus
ENSECAG00000021868	NCL	91	91.590	ENSPTIG00000010393	NCL	91	90.367	Panthera_tigris_altaica
ENSECAG00000021868	NCL	62	92.986	ENSPTRG00000013025	NCL	100	90.000	Pan_troglodytes
ENSECAG00000021868	NCL	92	88.485	ENSPANG00000010292	NCL	100	89.722	Papio_anubis
ENSECAG00000021868	NCL	70	85.941	ENSPPYG00000013265	NCL	92	83.008	Pongo_abelii
ENSECAG00000021868	NCL	91	82.748	ENSPCOG00000004160	-	86	89.683	Propithecus_coquereli
ENSECAG00000021868	NCL	92	88.235	ENSPCOG00000003051	-	91	87.179	Propithecus_coquereli
ENSECAG00000021868	NCL	92	88.235	ENSPVAG00000000297	NCL	100	89.350	Pteropus_vampyrus
ENSECAG00000021868	NCL	92	78.669	ENSRNOG00000018273	Ncl	92	80.484	Rattus_norvegicus
ENSECAG00000021868	NCL	66	96.886	ENSRBIG00000035396	-	88	94.966	Rhinopithecus_bieti
ENSECAG00000021868	NCL	92	83.587	ENSRBIG00000037525	-	91	83.283	Rhinopithecus_bieti
ENSECAG00000021868	NCL	99	84.497	ENSRROG00000036103	-	99	86.013	Rhinopithecus_roxellana
ENSECAG00000021868	NCL	92	88.485	ENSRROG00000028756	-	86	98.221	Rhinopithecus_roxellana
ENSECAG00000021868	NCL	62	91.892	ENSSBOG00000029193	-	92	87.764	Saimiri_boliviensis_boliviensis
ENSECAG00000021868	NCL	81	88.838	ENSSBOG00000027549	-	94	88.838	Saimiri_boliviensis_boliviensis
ENSECAG00000021868	NCL	67	74.429	ENSSBOG00000023094	-	78	74.661	Saimiri_boliviensis_boliviensis
ENSECAG00000021868	NCL	92	88.456	ENSSSCG00000016275	NCL	92	89.505	Sus_scrofa
ENSECAG00000021868	NCL	55	84.697	ENSTBEG00000001546	-	85	79.479	Tupaia_belangeri
ENSECAG00000021868	NCL	65	81.586	ENSTBEG00000002469	-	66	81.429	Tupaia_belangeri
ENSECAG00000021868	NCL	92	88.619	ENSTTRG00000009094	NCL	91	89.074	Tursiops_truncatus
ENSECAG00000021868	NCL	75	94.621	ENSUAMG00000005639	NCL	100	97.228	Ursus_americanus
ENSECAG00000021868	NCL	100	94.737	ENSUMAG00000015789	NCL	92	91.654	Ursus_maritimus
ENSECAG00000021868	NCL	68	90.141	ENSVPAG00000001796	NCL	69	90.141	Vicugna_pacos
ENSECAG00000021868	NCL	100	90.403	ENSVVUG00000025564	NCL	100	89.569	Vulpes_vulpes