EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000021949 (Gene tree)
Gene ID: 100146782
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 104061 bases
Position: chr9:42513873-42617933
Accession: 100146782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000019499	ResIII	PF04851.15	6.3e-13	1	1
ENSECAP00000032500	ResIII	PF04851.15	8e-13	1	1
ENSECAP00000019482	ResIII	PF04851.15	9e-13	1	1
ENSECAP00000029365	ResIII	PF04851.15	9.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000040226	-	3387	-	ENSECAP00000032500	855 (aa)	XP_023504467	UPI000C9EB1A6
ENSECAT00000023518	-	2754	-	ENSECAP00000019482	917 (aa)	-	F6YA53
ENSECAT00000023536	-	2907	-	ENSECAP00000019499	968 (aa)	XP_014583684	F6Y9Q7
ENSECAT00000050607	-	3283	-	ENSECAP00000029365	925 (aa)	-	-

Gene Model

Click here to download ENSECAG00000021949's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000021949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000021949	-	58	31.081	ENSECAG00000008915	CHD1L	52	30.722
ENSECAG00000021949	-	74	44.582	ENSECAG00000008760	RAD54L	87	44.547

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000021949	-	85	88.690	ENSG00000265817	FSBP	98	96.825	Homo_sapiens
ENSECAG00000021949	-	99	87.473	ENSG00000197275	RAD54B	99	87.473	Homo_sapiens
ENSECAG00000021949	-	99	89.035	ENSAMEG00000005834	-	100	89.035	Ailuropoda_melanoleuca
ENSECAG00000021949	-	99	54.962	ENSACIG00000013005	rad54b	99	54.962	Amphilophus_citrinellus
ENSECAG00000021949	-	98	54.984	ENSAOCG00000008523	rad54b	99	54.984	Amphiprion_ocellaris
ENSECAG00000021949	-	98	54.615	ENSAPEG00000001673	rad54b	99	54.258	Amphiprion_percula
ENSECAG00000021949	-	99	54.457	ENSATEG00000001527	rad54b	99	54.457	Anabas_testudineus
ENSECAG00000021949	-	99	67.791	ENSAPLG00000014366	-	99	67.791	Anas_platyrhynchos
ENSECAG00000021949	-	93	70.213	ENSACAG00000003671	-	99	70.213	Anolis_carolinensis
ENSECAG00000021949	-	76	86.728	ENSANAG00000019528	-	99	86.728	Aotus_nancymaae
ENSECAG00000021949	-	99	54.526	ENSACLG00000007826	rad54b	99	54.526	Astatotilapia_calliptera
ENSECAG00000021949	-	91	57.360	ENSAMXG00000039985	rad54b	95	57.196	Astyanax_mexicanus
ENSECAG00000021949	-	99	87.157	ENSBTAG00000000632	RAD54B	100	87.157	Bos_taurus
ENSECAG00000021949	-	84	34.865	WBGene00013792	Y116A8C.13	83	34.506	Caenorhabditis_elegans
ENSECAG00000021949	-	99	85.385	ENSCJAG00000000080	-	99	86.897	Callithrix_jacchus
ENSECAG00000021949	-	99	86.842	ENSCAFG00000009179	RAD54B	99	86.842	Canis_familiaris
ENSECAG00000021949	-	99	86.732	ENSCAFG00020012084	-	99	86.732	Canis_lupus_dingo
ENSECAG00000021949	-	99	86.937	ENSCHIG00000008230	-	100	86.937	Capra_hircus
ENSECAG00000021949	-	99	86.608	ENSTSYG00000013234	-	100	86.608	Carlito_syrichta
ENSECAG00000021949	-	99	81.319	ENSCPOG00000011643	-	99	81.319	Cavia_porcellus
ENSECAG00000021949	-	99	85.730	ENSCCAG00000011754	-	99	87.190	Cebus_capucinus
ENSECAG00000021949	-	99	87.033	ENSCATG00000030661	-	99	88.690	Cercocebus_atys
ENSECAG00000021949	-	99	82.599	ENSCLAG00000010476	-	99	82.599	Chinchilla_lanigera
ENSECAG00000021949	-	99	86.703	ENSCSAG00000012712	-	99	86.703	Chlorocebus_sabaeus
ENSECAG00000021949	-	99	68.478	ENSCPBG00000003204	-	99	69.149	Chrysemys_picta_bellii
ENSECAG00000021949	-	99	87.143	ENSCANG00000017939	-	99	88.552	Colobus_angolensis_palliatus
ENSECAG00000021949	-	99	78.485	ENSCGRG00001020184	Rad54b	100	78.485	Cricetulus_griseus_chok1gshd
ENSECAG00000021949	-	99	77.058	ENSCGRG00000016752	Rad54b	100	77.058	Cricetulus_griseus_crigri
ENSECAG00000021949	-	89	61.538	ENSCSEG00000001601	rad54b	93	57.736	Cynoglossus_semilaevis
ENSECAG00000021949	-	98	56.196	ENSCVAG00000009200	rad54b	99	56.196	Cyprinodon_variegatus
ENSECAG00000021949	-	99	54.713	ENSDARG00000092134	rad54b	100	59.754	Danio_rerio
ENSECAG00000021949	-	99	83.352	ENSDNOG00000015535	-	99	83.352	Dasypus_novemcinctus
ENSECAG00000021949	-	99	83.077	ENSDORG00000002492	Rad54b	100	83.077	Dipodomys_ordii
ENSECAG00000021949	-	86	81.980	ENSETEG00000010605	-	100	81.980	Echinops_telfairi
ENSECAG00000021949	-	99	46.559	ENSEBUG00000009104	rad54b	98	46.638	Eptatretus_burgeri
ENSECAG00000021949	-	96	99.094	ENSEASG00005004021	-	100	99.094	Equus_asinus_asinus
ENSECAG00000021949	-	82	83.230	ENSEEUG00000008056	-	83	83.230	Erinaceus_europaeus
ENSECAG00000021949	-	99	53.312	ENSELUG00000009287	rad54b	99	53.207	Esox_lucius
ENSECAG00000021949	-	99	88.377	ENSFCAG00000015513	-	100	90.771	Felis_catus
ENSECAG00000021949	-	99	67.171	ENSFALG00000005467	-	99	67.171	Ficedula_albicollis
ENSECAG00000021949	-	99	83.921	ENSFDAG00000020541	-	100	83.921	Fukomys_damarensis
ENSECAG00000021949	-	92	58.052	ENSFHEG00000014382	rad54b	87	58.052	Fundulus_heteroclitus
ENSECAG00000021949	-	92	56.336	ENSGMOG00000014774	rad54b	98	56.336	Gadus_morhua
ENSECAG00000021949	-	95	71.203	ENSGALG00000043597	RAD54B	99	66.739	Gallus_gallus
ENSECAG00000021949	-	99	54.105	ENSGAFG00000007901	rad54b	99	54.259	Gambusia_affinis
ENSECAG00000021949	-	99	55.424	ENSGACG00000009128	rad54b	99	55.424	Gasterosteus_aculeatus
ENSECAG00000021949	-	99	69.037	ENSGAGG00000018747	-	99	69.037	Gopherus_agassizii
ENSECAG00000021949	-	99	86.937	ENSGGOG00000023516	-	100	86.937	Gorilla_gorilla
ENSECAG00000021949	-	99	54.207	ENSHBUG00000016017	rad54b	99	54.207	Haplochromis_burtoni
ENSECAG00000021949	-	99	82.174	ENSHGLG00000008263	RAD54B	100	82.104	Heterocephalus_glaber_female
ENSECAG00000021949	-	99	81.425	ENSHGLG00100008108	-	100	81.358	Heterocephalus_glaber_male
ENSECAG00000021949	-	98	52.838	ENSHCOG00000004764	rad54b	98	55.720	Hippocampus_comes
ENSECAG00000021949	-	99	51.945	ENSIPUG00000018531	rad54b	99	51.945	Ictalurus_punctatus
ENSECAG00000021949	-	99	82.854	ENSSTOG00000010791	-	99	82.854	Ictidomys_tridecemlineatus
ENSECAG00000021949	-	99	81.319	ENSJJAG00000010314	Rad54b	100	81.319	Jaculus_jaculus
ENSECAG00000021949	-	99	53.536	ENSKMAG00000004744	rad54b	99	53.536	Kryptolebias_marmoratus
ENSECAG00000021949	-	87	68.901	ENSLACG00000000859	-	100	68.901	Latimeria_chalumnae
ENSECAG00000021949	-	97	62.053	ENSLOCG00000010100	rad54b	97	62.172	Lepisosteus_oculatus
ENSECAG00000021949	-	95	84.530	ENSLAFG00000015315	-	100	84.530	Loxodonta_africana
ENSECAG00000021949	-	99	86.813	ENSMFAG00000031629	-	99	88.276	Macaca_fascicularis
ENSECAG00000021949	-	99	86.813	ENSMMUG00000005659	-	99	86.813	Macaca_mulatta
ENSECAG00000021949	-	99	86.909	ENSMNEG00000016408	-	99	86.909	Macaca_nemestrina
ENSECAG00000021949	-	99	86.923	ENSMLEG00000006946	-	99	86.923	Mandrillus_leucophaeus
ENSECAG00000021949	-	99	54.644	ENSMAMG00000012269	rad54b	99	54.644	Mastacembelus_armatus
ENSECAG00000021949	-	99	54.207	ENSMZEG00005005281	rad54b	95	59.874	Maylandia_zebra
ENSECAG00000021949	-	95	71.324	ENSMGAG00000012024	-	99	66.882	Meleagris_gallopavo
ENSECAG00000021949	-	99	77.278	ENSMAUG00000013586	Rad54b	100	77.278	Mesocricetus_auratus
ENSECAG00000021949	-	95	88.614	ENSMICG00000000754	-	99	82.838	Microcebus_murinus
ENSECAG00000021949	-	100	75.818	ENSMOCG00000020035	Rad54b	99	76.290	Microtus_ochrogaster
ENSECAG00000021949	-	99	53.680	ENSMMOG00000003394	rad54b	99	53.680	Mola_mola
ENSECAG00000021949	-	94	75.841	ENSMODG00000007343	-	99	75.841	Monodelphis_domestica
ENSECAG00000021949	-	75	59.380	ENSMALG00000001520	rad54b	99	59.380	Monopterus_albus
ENSECAG00000021949	-	99	77.387	MGP_CAROLIEiJ_G0025810	Rad54b	100	77.387	Mus_caroli
ENSECAG00000021949	-	99	77.143	ENSMUSG00000078773	Rad54b	100	77.143	Mus_musculus
ENSECAG00000021949	-	99	78.266	MGP_PahariEiJ_G0023933	Rad54b	100	78.266	Mus_pahari
ENSECAG00000021949	-	99	77.912	MGP_SPRETEiJ_G0026758	Rad54b	100	77.912	Mus_spretus
ENSECAG00000021949	-	95	88.519	ENSMPUG00000008878	-	100	88.642	Mustela_putorius_furo
ENSECAG00000021949	-	99	85.401	ENSMLUG00000008953	-	99	85.401	Myotis_lucifugus
ENSECAG00000021949	-	99	81.550	ENSNGAG00000017537	Rad54b	100	81.550	Nannospalax_galili
ENSECAG00000021949	-	99	55.315	ENSNBRG00000013394	rad54b	99	55.315	Neolamprologus_brichardi
ENSECAG00000021949	-	99	87.143	ENSNLEG00000003062	-	99	88.414	Nomascus_leucogenys
ENSECAG00000021949	-	82	72.951	ENSMEUG00000012426	-	82	72.951	Notamacropus_eugenii
ENSECAG00000021949	-	99	81.429	ENSODEG00000019564	-	100	81.429	Octodon_degus
ENSECAG00000021949	-	95	77.847	ENSODEG00000002650	-	96	84.615	Octodon_degus
ENSECAG00000021949	-	99	55.724	ENSONIG00000006067	rad54b	99	55.724	Oreochromis_niloticus
ENSECAG00000021949	-	88	75.299	ENSOANG00000011348	-	100	75.299	Ornithorhynchus_anatinus
ENSECAG00000021949	-	99	82.747	ENSOCUG00000016478	-	99	82.747	Oryctolagus_cuniculus
ENSECAG00000021949	-	99	55.048	ENSORLG00000008918	rad54b	99	62.442	Oryzias_latipes
ENSECAG00000021949	-	75	62.597	ENSORLG00020012171	rad54b	99	62.597	Oryzias_latipes_hni
ENSECAG00000021949	-	99	55.308	ENSORLG00015018536	rad54b	99	55.308	Oryzias_latipes_hsok
ENSECAG00000021949	-	90	59.744	ENSOMEG00000004345	rad54b	99	59.744	Oryzias_melastigma
ENSECAG00000021949	-	99	85.165	ENSOGAG00000007854	-	99	85.165	Otolemur_garnettii
ENSECAG00000021949	-	95	88.177	ENSOARG00000007691	-	100	88.300	Ovis_aries
ENSECAG00000021949	-	99	85.714	ENSPPAG00000029572	-	99	85.714	Pan_paniscus
ENSECAG00000021949	-	99	88.487	ENSPPRG00000007571	-	100	91.047	Panthera_pardus
ENSECAG00000021949	-	85	91.185	ENSPTIG00000012670	-	100	91.185	Panthera_tigris_altaica
ENSECAG00000021949	-	99	87.253	ENSPTRG00000020427	-	99	88.552	Pan_troglodytes
ENSECAG00000021949	-	99	87.033	ENSPANG00000019566	-	99	87.033	Papio_anubis
ENSECAG00000021949	-	98	58.072	ENSPKIG00000014974	rad54b	99	58.072	Paramormyrops_kingsleyae
ENSECAG00000021949	-	99	67.065	ENSPSIG00000002383	-	98	71.357	Pelodiscus_sinensis
ENSECAG00000021949	-	99	78.595	ENSPEMG00000012133	Rad54b	100	78.595	Peromyscus_maniculatus_bairdii
ENSECAG00000021949	-	92	57.711	ENSPMAG00000002916	rad54b	99	57.960	Petromyzon_marinus
ENSECAG00000021949	-	94	76.961	ENSPCIG00000020151	-	94	76.683	Phascolarctos_cinereus
ENSECAG00000021949	-	99	54.984	ENSPFOG00000023411	rad54b	99	54.984	Poecilia_formosa
ENSECAG00000021949	-	99	55.194	ENSPLAG00000010430	rad54b	99	55.194	Poecilia_latipinna
ENSECAG00000021949	-	99	54.947	ENSPMEG00000016873	rad54b	99	54.947	Poecilia_mexicana
ENSECAG00000021949	-	99	54.947	ENSPREG00000018443	rad54b	99	54.947	Poecilia_reticulata
ENSECAG00000021949	-	99	87.033	ENSPPYG00000018750	-	99	87.033	Pongo_abelii
ENSECAG00000021949	-	99	87.692	ENSPCOG00000026845	-	99	88.276	Propithecus_coquereli
ENSECAG00000021949	-	87	89.339	ENSPVAG00000000261	-	92	89.339	Pteropus_vampyrus
ENSECAG00000021949	-	92	59.673	ENSPNYG00000018303	rad54b	96	59.673	Pundamilia_nyererei
ENSECAG00000021949	-	99	53.341	ENSPNAG00000000295	rad54b	99	53.341	Pygocentrus_nattereri
ENSECAG00000021949	-	95	78.765	ENSRNOG00000039949	Rad54b	100	74.424	Rattus_norvegicus
ENSECAG00000021949	-	99	86.264	ENSRBIG00000020419	-	99	86.264	Rhinopithecus_bieti
ENSECAG00000021949	-	99	86.264	ENSRROG00000039897	-	99	86.264	Rhinopithecus_roxellana
ENSECAG00000021949	-	65	42.339	YBR073W	RDH54	61	42.339	Saccharomyces_cerevisiae
ENSECAG00000021949	-	99	85.385	ENSSBOG00000028501	-	99	85.385	Saimiri_boliviensis_boliviensis
ENSECAG00000021949	-	99	72.837	ENSSHAG00000017038	-	99	72.837	Sarcophilus_harrisii
ENSECAG00000021949	-	70	63.606	ENSSFOG00015008483	rad54b	93	63.500	Scleropages_formosus
ENSECAG00000021949	-	99	53.417	ENSSMAG00000018659	rad54b	99	54.048	Scophthalmus_maximus
ENSECAG00000021949	-	98	54.131	ENSSDUG00000001122	rad54b	98	53.846	Seriola_dumerili
ENSECAG00000021949	-	99	54.088	ENSSLDG00000013787	rad54b	99	54.097	Seriola_lalandi_dorsalis
ENSECAG00000021949	-	99	65.683	ENSSPUG00000016497	-	99	65.683	Sphenodon_punctatus
ENSECAG00000021949	-	99	55.060	ENSSPAG00000012800	rad54b	99	55.060	Stegastes_partitus
ENSECAG00000021949	-	99	86.249	ENSSSCG00000006101	-	99	88.861	Sus_scrofa
ENSECAG00000021949	-	99	66.595	ENSTGUG00000011880	-	99	66.595	Taeniopygia_guttata
ENSECAG00000021949	-	98	53.446	ENSTRUG00000010015	rad54b	99	54.149	Takifugu_rubripes
ENSECAG00000021949	-	99	84.632	ENSTTRG00000006312	-	100	84.632	Tursiops_truncatus
ENSECAG00000021949	-	99	88.596	ENSUMAG00000016401	-	100	88.596	Ursus_maritimus
ENSECAG00000021949	-	99	86.169	ENSVPAG00000003157	-	100	86.169	Vicugna_pacos
ENSECAG00000021949	-	99	55.131	ENSXETG00000025924	rad54b	99	59.227	Xenopus_tropicalis
ENSECAG00000021949	-	99	55.120	ENSXMAG00000013141	rad54b	99	55.120	Xiphophorus_maculatus