EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSECAG00000022005 (Gene tree)
Gene ID
100059817
Gene Symbol
CHD4
Alias
-
Full Name
chromodomain helicase DNA binding protein 4
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Minus strand
Length
26066 bases
Position
chr6:35121564-35147629
Accession
16486
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000023536ResIIIPF04851.156.4e-1011
ENSECAP00000019928ResIIIPF04851.156.7e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000045185-5850-ENSECAP000000235361923 (aa)--
ENSECAT00000024014-5817-ENSECAP000000199281912 (aa)XP_023498798F7B896
ENSECAT00000041061-5679-ENSECAP000000234141866 (aa)--
Gene Model
Click here to download ENSECAG00000022005's gene model file
Pathways
Pathway IDPathway NameSource
ecb05165Human papillomavirus infectionKEGG
ecb05203Viral carcinogenesisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000022005's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSECAG00000022005CHD48880.751ENSECAG00000025043CHD59779.915
ENSECAG00000022005CHD49070.441ENSECAG00000010051CHD39569.019
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000022005CHD410099.268ENSG00000111642CHD410099.435Homo_sapiens
ENSECAG00000022005CHD49270.843ENSAPOG00000020502-9370.288Acanthochromis_polyacanthus
ENSECAG00000022005CHD49279.899ENSAPOG00000008935chd4a9978.719Acanthochromis_polyacanthus
ENSECAG00000022005CHD410098.954ENSAMEG00000014179-9998.954Ailuropoda_melanoleuca
ENSECAG00000022005CHD49276.375ENSACIG00000012387-9576.362Amphilophus_citrinellus
ENSECAG00000022005CHD49578.002ENSACIG00000019310chd4a9092.825Amphilophus_citrinellus
ENSECAG00000022005CHD49281.188ENSAOCG00000016412-9880.960Amphiprion_ocellaris
ENSECAG00000022005CHD49875.051ENSAOCG00000000507-9874.826Amphiprion_ocellaris
ENSECAG00000022005CHD49271.067ENSAPEG00000020306-8883.019Amphiprion_percula
ENSECAG00000022005CHD49385.833ENSAPEG00000001757chd4a9976.829Amphiprion_percula
ENSECAG00000022005CHD49574.960ENSAPEG00000005957-9875.081Amphiprion_percula
ENSECAG00000022005CHD49083.004ENSATEG00000016428chd4a9586.192Anabas_testudineus
ENSECAG00000022005CHD49272.004ENSATEG00000000976-9471.805Anabas_testudineus
ENSECAG00000022005CHD48475.229ENSATEG00000021141-9675.725Anabas_testudineus
ENSECAG00000022005CHD49988.425ENSAPLG00000014146-10088.406Anas_platyrhynchos
ENSECAG00000022005CHD49989.548ENSACAG00000006231-10089.061Anolis_carolinensis
ENSECAG00000022005CHD410099.006ENSANAG00000035685-10099.006Aotus_nancymaae
ENSECAG00000022005CHD49477.384ENSACLG00000015837chd4a9677.301Astatotilapia_calliptera
ENSECAG00000022005CHD49576.420ENSACLG00000024468-9578.322Astatotilapia_calliptera
ENSECAG00000022005CHD49578.292ENSAMXG00000010614-9677.716Astyanax_mexicanus
ENSECAG00000022005CHD49581.099ENSAMXG00000019969chd4a9879.394Astyanax_mexicanus
ENSECAG00000022005CHD410098.797ENSBTAG00000014734CHD410098.797Bos_taurus
ENSECAG00000022005CHD410099.320ENSCJAG00000008114-10099.320Callithrix_jacchus
ENSECAG00000022005CHD410099.477ENSCAFG00000014929CHD410099.477Canis_familiaris
ENSECAG00000022005CHD410098.431ENSCAFG00020002892-10098.431Canis_lupus_dingo
ENSECAG00000022005CHD410098.379ENSCHIG00000020766-10098.379Capra_hircus
ENSECAG00000022005CHD49997.743ENSTSYG00000006069-9997.743Carlito_syrichta
ENSECAG00000022005CHD49899.148ENSCPOG00000008504-9999.148Cavia_porcellus
ENSECAG00000022005CHD410099.372ENSCCAG00000009686-10099.372Cebus_capucinus
ENSECAG00000022005CHD410099.320ENSCATG00000006345-10099.320Cercocebus_atys
ENSECAG00000022005CHD410098.902ENSCLAG00000012244-10098.902Chinchilla_lanigera
ENSECAG00000022005CHD410099.269ENSCSAG00000010429-10099.269Chlorocebus_sabaeus
ENSECAG00000022005CHD483100.000ENSCHOG00000000277-8499.200Choloepus_hoffmanni
ENSECAG00000022005CHD49990.120ENSCPBG00000027716-9690.301Chrysemys_picta_bellii
ENSECAG00000022005CHD49254.925ENSCSAVG00000004448-9961.783Ciona_savignyi
ENSECAG00000022005CHD410094.671ENSCANG00000035317-10096.955Colobus_angolensis_palliatus
ENSECAG00000022005CHD410097.866ENSCGRG00001020662Chd410097.866Cricetulus_griseus_chok1gshd
ENSECAG00000022005CHD49998.177ENSCGRG00000015920Chd410098.177Cricetulus_griseus_crigri
ENSECAG00000022005CHD48988.235ENSCSEG00000017173chd4a9288.235Cynoglossus_semilaevis
ENSECAG00000022005CHD49270.761ENSCSEG00000018096-9269.616Cynoglossus_semilaevis
ENSECAG00000022005CHD49577.954ENSCSEG00000019943-9877.079Cynoglossus_semilaevis
ENSECAG00000022005CHD48993.151ENSCVAG00000004940chd4a9092.727Cyprinodon_variegatus
ENSECAG00000022005CHD49577.250ENSCVAG00000001128-9678.302Cyprinodon_variegatus
ENSECAG00000022005CHD49271.549ENSCVAG00000016412-8880.531Cyprinodon_variegatus
ENSECAG00000022005CHD49677.714ENSDARG00000063535chd4a9378.366Danio_rerio
ENSECAG00000022005CHD410098.693ENSDNOG00000001134-10098.693Dasypus_novemcinctus
ENSECAG00000022005CHD49997.067ENSDORG00000001847Chd49897.067Dipodomys_ordii
ENSECAG00000022005CHD47673.351ENSEBUG00000012670chd4a9275.653Eptatretus_burgeri
ENSECAG00000022005CHD410099.948ENSEASG00005016150-10099.948Equus_asinus_asinus
ENSECAG00000022005CHD49279.285ENSELUG00000021276chd4a9189.030Esox_lucius
ENSECAG00000022005CHD49478.365ENSELUG00000018086-9779.328Esox_lucius
ENSECAG00000022005CHD410099.634ENSFCAG00000006877-10099.634Felis_catus
ENSECAG00000022005CHD48193.750ENSFALG00000004785-9793.826Ficedula_albicollis
ENSECAG00000022005CHD410097.034ENSFDAG00000020219-10097.034Fukomys_damarensis
ENSECAG00000022005CHD48678.261ENSFHEG00000012736-9779.039Fundulus_heteroclitus
ENSECAG00000022005CHD49271.155ENSFHEG00000003253-9280.531Fundulus_heteroclitus
ENSECAG00000022005CHD49576.400ENSFHEG00000002013chd4a9576.665Fundulus_heteroclitus
ENSECAG00000022005CHD45681.523ENSGMOG00000015722chd4a9385.944Gadus_morhua
ENSECAG00000022005CHD46997.561ENSGMOG00000017923-7793.939Gadus_morhua
ENSECAG00000022005CHD45088.259ENSGMOG00000003394-7888.259Gadus_morhua
ENSECAG00000022005CHD46191.372ENSGALG00000013565-9891.631Gallus_gallus
ENSECAG00000022005CHD49576.312ENSGAFG00000002778chd4a9377.363Gambusia_affinis
ENSECAG00000022005CHD48391.743ENSGAFG00000014337-9688.462Gambusia_affinis
ENSECAG00000022005CHD45282.019ENSGACG00000010099-9282.341Gasterosteus_aculeatus
ENSECAG00000022005CHD49575.543ENSGACG00000018705chd4a9975.885Gasterosteus_aculeatus
ENSECAG00000022005CHD49989.859ENSGAGG00000001416-9789.984Gopherus_agassizii
ENSECAG00000022005CHD410099.320ENSGGOG00000001930CHD410099.320Gorilla_gorilla
ENSECAG00000022005CHD49576.420ENSHBUG00000016000-9578.251Haplochromis_burtoni
ENSECAG00000022005CHD49079.950ENSHBUG00000019146chd4a9575.307Haplochromis_burtoni
ENSECAG00000022005CHD410098.640ENSHGLG00000003093-10098.640Heterocephalus_glaber_female
ENSECAG00000022005CHD410098.954ENSHGLG00100007450-10098.954Heterocephalus_glaber_male
ENSECAG00000022005CHD48874.766ENSHCOG00000017525-9585.946Hippocampus_comes
ENSECAG00000022005CHD48269.240ENSHCOG00000014308-8873.791Hippocampus_comes
ENSECAG00000022005CHD49679.314ENSIPUG00000005694chd49680.797Ictalurus_punctatus
ENSECAG00000022005CHD49999.109ENSSTOG00000007601-9999.109Ictidomys_tridecemlineatus
ENSECAG00000022005CHD410097.856ENSJJAG00000012394Chd410097.856Jaculus_jaculus
ENSECAG00000022005CHD49576.944ENSKMAG00000019286chd4a9577.022Kryptolebias_marmoratus
ENSECAG00000022005CHD49270.793ENSKMAG00000017827-9079.736Kryptolebias_marmoratus
ENSECAG00000022005CHD49974.083ENSKMAG00000007932-9277.208Kryptolebias_marmoratus
ENSECAG00000022005CHD47974.102ENSLBEG00000026652-9573.450Labrus_bergylta
ENSECAG00000022005CHD49575.664ENSLBEG00000012434CHD49275.591Labrus_bergylta
ENSECAG00000022005CHD49974.911ENSLOCG00000007438chd4a9576.229Lepisosteus_oculatus
ENSECAG00000022005CHD47892.816ENSLAFG00000022842-10096.025Loxodonta_africana
ENSECAG00000022005CHD410099.372ENSMFAG00000003188-10099.372Macaca_fascicularis
ENSECAG00000022005CHD410097.784ENSMMUG00000018685-10097.784Macaca_mulatta
ENSECAG00000022005CHD410097.388ENSMNEG00000044776-10097.388Macaca_nemestrina
ENSECAG00000022005CHD410097.283ENSMLEG00000024661-10097.283Mandrillus_leucophaeus
ENSECAG00000022005CHD49574.764ENSMAMG00000002584-8985.714Mastacembelus_armatus
ENSECAG00000022005CHD49270.749ENSMAMG00000002137-8781.279Mastacembelus_armatus
ENSECAG00000022005CHD49877.615ENSMAMG00000018954chd4a9677.736Mastacembelus_armatus
ENSECAG00000022005CHD49875.431ENSMZEG00005001706chd4a9677.288Maylandia_zebra
ENSECAG00000022005CHD49576.366ENSMZEG00005017761-9578.195Maylandia_zebra
ENSECAG00000022005CHD49991.066ENSMGAG00000014084-10090.716Meleagris_gallopavo
ENSECAG00000022005CHD410099.477ENSMICG00000006588-10099.477Microcebus_murinus
ENSECAG00000022005CHD410097.919ENSMOCG00000020624Chd410097.919Microtus_ochrogaster
ENSECAG00000022005CHD48270.272ENSMMOG00000013429-8675.336Mola_mola
ENSECAG00000022005CHD49577.332ENSMMOG00000000073chd4a9977.208Mola_mola
ENSECAG00000022005CHD49575.746ENSMMOG00000015971-9576.828Mola_mola
ENSECAG00000022005CHD48295.777ENSMODG00000018094-10095.777Monodelphis_domestica
ENSECAG00000022005CHD49577.472ENSMALG00000005766chd4a9674.853Monopterus_albus
ENSECAG00000022005CHD49575.622ENSMALG00000022494-9576.872Monopterus_albus
ENSECAG00000022005CHD410097.971ENSMUSG00000063870Chd410097.971Mus_musculus
ENSECAG00000022005CHD410097.973MGP_SPRETEiJ_G0029911Chd410097.973Mus_spretus
ENSECAG00000022005CHD410099.582ENSMPUG00000016859-10099.582Mustela_putorius_furo
ENSECAG00000022005CHD410099.059ENSMLUG00000014343-9999.059Myotis_lucifugus
ENSECAG00000022005CHD410097.071ENSNGAG00000016920Chd410097.071Nannospalax_galili
ENSECAG00000022005CHD49576.312ENSNBRG00000021576-9578.307Neolamprologus_brichardi
ENSECAG00000022005CHD49998.102ENSNLEG00000004330-9698.102Nomascus_leucogenys
ENSECAG00000022005CHD48399.200ENSMEUG00000015294-8499.200Notamacropus_eugenii
ENSECAG00000022005CHD48797.740ENSOPRG00000003477-8497.740Ochotona_princeps
ENSECAG00000022005CHD49998.586ENSODEG00000003114-9998.586Octodon_degus
ENSECAG00000022005CHD49479.066ENSONIG00000006992chd4a9379.568Oreochromis_niloticus
ENSECAG00000022005CHD49876.106ENSONIG00000012953-9478.532Oreochromis_niloticus
ENSECAG00000022005CHD410096.810ENSOCUG00000008215-9996.810Oryctolagus_cuniculus
ENSECAG00000022005CHD49676.504ENSORLG00000012477-9677.117Oryzias_latipes
ENSECAG00000022005CHD49576.741ENSORLG00000006310chd4a9377.522Oryzias_latipes
ENSECAG00000022005CHD49570.738ENSORLG00000017190-9082.273Oryzias_latipes
ENSECAG00000022005CHD49576.446ENSORLG00020006529chd4a9377.382Oryzias_latipes_hni
ENSECAG00000022005CHD48269.371ENSORLG00020011739-8675.088Oryzias_latipes_hni
ENSECAG00000022005CHD49676.400ENSORLG00020004891-9276.092Oryzias_latipes_hni
ENSECAG00000022005CHD49578.282ENSORLG00015010692-9677.971Oryzias_latipes_hsok
ENSECAG00000022005CHD49578.459ENSORLG00015019674chd4a9678.383Oryzias_latipes_hsok
ENSECAG00000022005CHD49676.791ENSOMEG00000013408-9176.984Oryzias_melastigma
ENSECAG00000022005CHD49082.576ENSOMEG00000016394chd4a9092.377Oryzias_melastigma
ENSECAG00000022005CHD49268.726ENSOMEG00000014929-9368.066Oryzias_melastigma
ENSECAG00000022005CHD410097.784ENSOGAG00000010031-10097.784Otolemur_garnettii
ENSECAG00000022005CHD49898.777ENSOARG00000007398-10098.777Ovis_aries
ENSECAG00000022005CHD410099.216ENSPPAG00000029007-10099.216Pan_paniscus
ENSECAG00000022005CHD410099.529ENSPPRG00000001388-10099.529Panthera_pardus
ENSECAG00000022005CHD410099.582ENSPTIG00000010979-10099.582Panthera_tigris_altaica
ENSECAG00000022005CHD410099.320ENSPTRG00000004580CHD410099.320Pan_troglodytes
ENSECAG00000022005CHD410099.269ENSPANG00000025409-10099.269Papio_anubis
ENSECAG00000022005CHD49570.490ENSPKIG00000012023-9572.086Paramormyrops_kingsleyae
ENSECAG00000022005CHD49878.895ENSPKIG00000008268chd4a9380.640Paramormyrops_kingsleyae
ENSECAG00000022005CHD49989.021ENSPSIG00000015546-9988.671Pelodiscus_sinensis
ENSECAG00000022005CHD49279.652ENSPMGG00000022981chd4a9779.370Periophthalmus_magnuspinnatus
ENSECAG00000022005CHD48770.627ENSPMGG00000007681-9969.851Periophthalmus_magnuspinnatus
ENSECAG00000022005CHD410096.134ENSPEMG00000010290Chd410096.134Peromyscus_maniculatus_bairdii
ENSECAG00000022005CHD49297.775ENSPCIG00000001846-10097.775Phascolarctos_cinereus
ENSECAG00000022005CHD49575.676ENSPFOG00000013889-9676.177Poecilia_formosa
ENSECAG00000022005CHD48670.935ENSPFOG00000016981-9270.806Poecilia_formosa
ENSECAG00000022005CHD49675.345ENSPFOG00000009089chd4a9378.595Poecilia_formosa
ENSECAG00000022005CHD49577.632ENSPLAG00000012712chd4a9377.540Poecilia_latipinna
ENSECAG00000022005CHD49874.759ENSPLAG00000004006-9179.675Poecilia_latipinna
ENSECAG00000022005CHD49575.137ENSPMEG00000006064-9675.658Poecilia_mexicana
ENSECAG00000022005CHD49271.412ENSPMEG00000015657-9471.091Poecilia_mexicana
ENSECAG00000022005CHD49577.549ENSPMEG00000009633chd4a9478.146Poecilia_mexicana
ENSECAG00000022005CHD48970.524ENSPREG00000014285-8782.249Poecilia_reticulata
ENSECAG00000022005CHD49874.278ENSPREG00000011359-9275.597Poecilia_reticulata
ENSECAG00000022005CHD48794.500ENSPREG00000001202chd4a9094.500Poecilia_reticulata
ENSECAG00000022005CHD49996.698ENSPPYG00000004192-10096.698Pongo_abelii
ENSECAG00000022005CHD473100.000ENSPCAG00000007120-85100.000Procavia_capensis
ENSECAG00000022005CHD410098.797ENSPCOG00000018635-10098.797Propithecus_coquereli
ENSECAG00000022005CHD49897.849ENSPVAG00000012574-10097.849Pteropus_vampyrus
ENSECAG00000022005CHD49874.391ENSPNYG00000023020-9276.676Pundamilia_nyererei
ENSECAG00000022005CHD49478.936ENSPNYG00000002663chd4a9478.880Pundamilia_nyererei
ENSECAG00000022005CHD49184.047ENSPNAG00000009629chd4a9587.137Pygocentrus_nattereri
ENSECAG00000022005CHD49578.115ENSPNAG00000011129-9479.033Pygocentrus_nattereri
ENSECAG00000022005CHD410097.095ENSRNOG00000018309Chd410097.095Rattus_norvegicus
ENSECAG00000022005CHD49799.406ENSRBIG00000041491-10099.406Rhinopithecus_bieti
ENSECAG00000022005CHD410099.425ENSRROG00000042446-10099.425Rhinopithecus_roxellana
ENSECAG00000022005CHD410097.699ENSSBOG00000020782-10097.699Saimiri_boliviensis_boliviensis
ENSECAG00000022005CHD49482.730ENSSHAG00000015079-9594.528Sarcophilus_harrisii
ENSECAG00000022005CHD49877.204ENSSFOG00015002908chd49679.856Scleropages_formosus
ENSECAG00000022005CHD49269.171ENSSMAG00000017926-9268.771Scophthalmus_maximus
ENSECAG00000022005CHD49574.437ENSSMAG00000010969-9574.627Scophthalmus_maximus
ENSECAG00000022005CHD49595.673ENSSMAG00000012594chd4a9578.480Scophthalmus_maximus
ENSECAG00000022005CHD49479.757ENSSDUG00000012051-9376.269Seriola_dumerili
ENSECAG00000022005CHD49279.617ENSSDUG00000002891chd4a9778.820Seriola_dumerili
ENSECAG00000022005CHD49873.313ENSSLDG00000018645chd4a9876.884Seriola_lalandi_dorsalis
ENSECAG00000022005CHD49370.281ENSSLDG00000019750-9570.608Seriola_lalandi_dorsalis
ENSECAG00000022005CHD49183.426ENSSLDG00000023821-8786.311Seriola_lalandi_dorsalis
ENSECAG00000022005CHD470100.000ENSSARG00000012988-72100.000Sorex_araneus
ENSECAG00000022005CHD49988.872ENSSPUG00000015131-10089.417Sphenodon_punctatus
ENSECAG00000022005CHD49271.749ENSSPAG00000018749-9471.174Stegastes_partitus
ENSECAG00000022005CHD49578.801ENSSPAG00000013983chd4a9977.622Stegastes_partitus
ENSECAG00000022005CHD410099.268ENSSSCG00000000697-10099.268Sus_scrofa
ENSECAG00000022005CHD49990.276ENSTGUG00000013329-10089.964Taeniopygia_guttata
ENSECAG00000022005CHD49477.100ENSTRUG00000007202-9976.409Takifugu_rubripes
ENSECAG00000022005CHD49271.783ENSTRUG00000007623-8777.974Takifugu_rubripes
ENSECAG00000022005CHD49477.280ENSTNIG00000008031-9876.672Tetraodon_nigroviridis
ENSECAG00000022005CHD49666.974ENSTNIG00000004095-9574.790Tetraodon_nigroviridis
ENSECAG00000022005CHD484100.000ENSTBEG00000011379-90100.000Tupaia_belangeri
ENSECAG00000022005CHD49893.494ENSTTRG00000016102-10093.494Tursiops_truncatus
ENSECAG00000022005CHD410097.680ENSUAMG00000016452-9999.217Ursus_americanus
ENSECAG00000022005CHD410095.084ENSUMAG00000005336-9899.332Ursus_maritimus
ENSECAG00000022005CHD410099.477ENSVVUG00000011414-10099.477Vulpes_vulpes
ENSECAG00000022005CHD45382.318ENSXETG00000018961-9981.382Xenopus_tropicalis
ENSECAG00000022005CHD46487.398ENSXETG00000026410chd49992.352Xenopus_tropicalis
ENSECAG00000022005CHD49576.271ENSXCOG00000019269-9675.910Xiphophorus_couchianus
ENSECAG00000022005CHD49272.016ENSXMAG00000014686-9382.727Xiphophorus_maculatus
ENSECAG00000022005CHD47783.085ENSXMAG00000001037chd4a8883.581Xiphophorus_maculatus
ENSECAG00000022005CHD49576.271ENSXMAG00000011263-9676.153Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us