EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000022182 (Gene tree)
Gene ID: 100063820
Gene Symbol: RDM1
Alias: -
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 9035 bases
Position: chr11:18321278-18330312
Accession: 22282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000027087	RRM_1	PF00076.22	3.7e-05	1	1
ENSECAP00000019620	RRM_1	PF00076.22	4.9e-05	1	1
ENSECAP00000030594	RRM_1	PF00076.22	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000055959	-	1717	-	ENSECAP00000030594	281 (aa)	-	-
ENSECAT00000023674	-	1280	-	ENSECAP00000019620	319 (aa)	XP_023508118	F6Z2F6
ENSECAT00000048840	-	1798	-	ENSECAP00000027087	250 (aa)	-	-

Gene Model

Click here to download ENSECAG00000022182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000022182's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000022182	RDM1	91	81.961	ENSG00000278023	RDM1	97	90.977	Homo_sapiens
ENSECAG00000022182	RDM1	73	35.470	ENSAPOG00000021886	zgc:103564	83	35.470	Acanthochromis_polyacanthus
ENSECAG00000022182	RDM1	90	34.510	ENSAPEG00000008929	zgc:103564	92	34.510	Amphiprion_percula
ENSECAG00000022182	RDM1	80	54.425	ENSAPLG00000004384	RDM1	95	53.386	Anas_platyrhynchos
ENSECAG00000022182	RDM1	91	49.219	ENSACAG00000012989	-	91	49.219	Anolis_carolinensis
ENSECAG00000022182	RDM1	91	81.569	ENSANAG00000032752	RDM1	96	90.226	Aotus_nancymaae
ENSECAG00000022182	RDM1	96	82.222	ENSBTAG00000000030	RDM1	93	82.222	Bos_taurus
ENSECAG00000022182	RDM1	91	81.569	ENSCJAG00000015031	RDM1	96	91.729	Callithrix_jacchus
ENSECAG00000022182	RDM1	90	72.201	ENSCAFG00000015160	-	100	72.201	Canis_familiaris
ENSECAG00000022182	RDM1	96	81.181	ENSCHIG00000020607	RDM1	94	81.181	Capra_hircus
ENSECAG00000022182	RDM1	91	70.980	ENSCPOG00000001495	-	88	70.980	Cavia_porcellus
ENSECAG00000022182	RDM1	91	80.392	ENSCCAG00000035763	RDM1	96	89.474	Cebus_capucinus
ENSECAG00000022182	RDM1	91	82.353	ENSCATG00000044451	RDM1	96	91.729	Cercocebus_atys
ENSECAG00000022182	RDM1	82	78.544	ENSCSAG00000006209	RDM1	98	78.544	Chlorocebus_sabaeus
ENSECAG00000022182	RDM1	80	53.982	ENSCPBG00000009105	RDM1	95	52.778	Chrysemys_picta_bellii
ENSECAG00000022182	RDM1	91	80.784	ENSCANG00000041322	RDM1	90	88.679	Colobus_angolensis_palliatus
ENSECAG00000022182	RDM1	91	72.157	ENSCGRG00001015927	Rdm1	89	72.157	Cricetulus_griseus_chok1gshd
ENSECAG00000022182	RDM1	90	34.375	ENSCVAG00000001956	zgc:103564	90	34.766	Cyprinodon_variegatus
ENSECAG00000022182	RDM1	82	81.154	ENSDNOG00000045224	-	96	81.154	Dasypus_novemcinctus
ENSECAG00000022182	RDM1	90	99.111	ENSEASG00005010554	RDM1	92	99.222	Equus_asinus_asinus
ENSECAG00000022182	RDM1	79	74.439	ENSEEUG00000006127	RDM1	100	73.333	Erinaceus_europaeus
ENSECAG00000022182	RDM1	82	83.913	ENSFCAG00000043429	RDM1	96	87.970	Felis_catus
ENSECAG00000022182	RDM1	91	54.297	ENSGALG00000000243	RDM1	88	54.297	Gallus_gallus
ENSECAG00000022182	RDM1	80	52.655	ENSGAGG00000000293	-	78	51.587	Gopherus_agassizii
ENSECAG00000022182	RDM1	91	81.961	ENSGGOG00000010584	RDM1	96	90.977	Gorilla_gorilla
ENSECAG00000022182	RDM1	98	36.232	ENSHCOG00000002518	-	97	37.184	Hippocampus_comes
ENSECAG00000022182	RDM1	91	79.608	ENSSTOG00000022491	RDM1	89	79.608	Ictidomys_tridecemlineatus
ENSECAG00000022182	RDM1	90	82.031	ENSLAFG00000029300	RDM1	89	82.031	Loxodonta_africana
ENSECAG00000022182	RDM1	91	81.961	ENSMFAG00000032968	RDM1	96	91.729	Macaca_fascicularis
ENSECAG00000022182	RDM1	91	82.353	ENSMMUG00000006847	RDM1	90	89.623	Macaca_mulatta
ENSECAG00000022182	RDM1	91	81.961	ENSMNEG00000039977	RDM1	96	91.729	Macaca_nemestrina
ENSECAG00000022182	RDM1	91	81.961	ENSMLEG00000041158	RDM1	90	89.623	Mandrillus_leucophaeus
ENSECAG00000022182	RDM1	84	51.667	ENSMGAG00000008774	RDM1	96	52.209	Meleagris_gallopavo
ENSECAG00000022182	RDM1	91	70.980	ENSMAUG00000018559	Rdm1	89	70.980	Mesocricetus_auratus
ENSECAG00000022182	RDM1	96	80.000	ENSMICG00000038651	RDM1	94	84.000	Microcebus_murinus
ENSECAG00000022182	RDM1	91	71.484	ENSMOCG00000015095	Rdm1	92	71.484	Microtus_ochrogaster
ENSECAG00000022182	RDM1	91	65.490	ENSMODG00000011101	RDM1	96	62.271	Monodelphis_domestica
ENSECAG00000022182	RDM1	90	72.727	MGP_CAROLIEiJ_G0017226	Rdm1	89	72.941	Mus_caroli
ENSECAG00000022182	RDM1	90	72.727	ENSMUSG00000010362	Rdm1	90	71.863	Mus_musculus
ENSECAG00000022182	RDM1	91	72.941	MGP_PahariEiJ_G0018356	Rdm1	89	72.941	Mus_pahari
ENSECAG00000022182	RDM1	90	72.727	MGP_SPRETEiJ_G0018069	Rdm1	90	71.863	Mus_spretus
ENSECAG00000022182	RDM1	91	83.658	ENSMPUG00000008363	RDM1	89	83.658	Mustela_putorius_furo
ENSECAG00000022182	RDM1	91	82.745	ENSNLEG00000014173	RDM1	94	86.239	Nomascus_leucogenys
ENSECAG00000022182	RDM1	90	65.748	ENSMEUG00000015826	RDM1	100	65.748	Notamacropus_eugenii
ENSECAG00000022182	RDM1	93	75.479	ENSOCUG00000022704	RDM1	99	75.479	Oryctolagus_cuniculus
ENSECAG00000022182	RDM1	91	81.569	ENSOGAG00000011332	RDM1	89	81.569	Otolemur_garnettii
ENSECAG00000022182	RDM1	91	82.745	ENSPPAG00000029969	RDM1	89	82.745	Pan_paniscus
ENSECAG00000022182	RDM1	91	82.745	ENSPTRG00000009031	RDM1	96	91.729	Pan_troglodytes
ENSECAG00000022182	RDM1	91	81.961	ENSPANG00000022933	RDM1	96	90.977	Papio_anubis
ENSECAG00000022182	RDM1	91	73.333	ENSPEMG00000018985	Rdm1	89	73.333	Peromyscus_maniculatus_bairdii
ENSECAG00000022182	RDM1	91	81.569	ENSPPYG00000008198	RDM1	89	81.569	Pongo_abelii
ENSECAG00000022182	RDM1	91	82.745	ENSPCOG00000017995	RDM1	96	88.722	Propithecus_coquereli
ENSECAG00000022182	RDM1	90	83.465	ENSPVAG00000001116	RDM1	100	83.465	Pteropus_vampyrus
ENSECAG00000022182	RDM1	94	72.075	ENSRNOG00000020751	Rdm1	92	72.075	Rattus_norvegicus
ENSECAG00000022182	RDM1	91	80.784	ENSRBIG00000030000	RDM1	96	90.977	Rhinopithecus_bieti
ENSECAG00000022182	RDM1	91	81.176	ENSRROG00000035242	RDM1	90	89.623	Rhinopithecus_roxellana
ENSECAG00000022182	RDM1	93	69.084	ENSSHAG00000013584	RDM1	93	69.084	Sarcophilus_harrisii
ENSECAG00000022182	RDM1	90	52.362	ENSSPUG00000010941	RDM1	95	48.659	Sphenodon_punctatus
ENSECAG00000022182	RDM1	90	36.471	ENSSPAG00000011690	-	84	38.723	Stegastes_partitus
ENSECAG00000022182	RDM1	81	72.247	ENSSSCG00000017574	-	93	72.247	Sus_scrofa
ENSECAG00000022182	RDM1	80	60.784	ENSTBEG00000010030	RDM1	99	60.784	Tupaia_belangeri
ENSECAG00000022182	RDM1	91	84.314	ENSUAMG00000027279	RDM1	89	84.314	Ursus_americanus
ENSECAG00000022182	RDM1	91	84.314	ENSUMAG00000015423	RDM1	87	84.314	Ursus_maritimus