EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000022260 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 2728 bases
Position: chr7:56084230-56086957
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000019868	GTP_EFTU	PF00009.27	1.4e-51	1	1
ENSECAP00000019868	GTP_EFTU_D2	PF03144.25	2e-12	1	1
ENSECAP00000019868	GTP_EFTU_D3	PF03143.17	3.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000023944	-	1365	-	ENSECAP00000019868	454 (aa)	-	F7BQJ6

Gene Model

Click here to download ENSECAG00000022260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000022260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000022260	-	99	84.106	ENSECAG00000005234	-	99	84.106
ENSECAG00000022260	-	99	86.739	ENSECAG00000020363	EEF1A1	99	86.739
ENSECAG00000022260	-	96	36.343	ENSECAG00000021195	GSPT1	88	36.425
ENSECAG00000022260	-	92	87.294	ENSECAG00000025109	EEF1A2	92	87.294
ENSECAG00000022260	-	95	38.356	ENSECAG00000004470	HBS1L	66	38.356
ENSECAG00000022260	-	99	85.870	ENSECAG00000001048	-	99	85.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000022260	-	66	81.759	ENSAPOG00000004757	eef1a1l1	99	96.875	Acanthochromis_polyacanthus
ENSECAG00000022260	-	100	83.514	ENSAMEG00000009677	-	100	83.514	Ailuropoda_melanoleuca
ENSECAG00000022260	-	100	82.863	ENSAMEG00000004317	-	100	82.863	Ailuropoda_melanoleuca
ENSECAG00000022260	-	100	83.948	ENSCAFG00000013249	-	100	83.948	Canis_familiaris
ENSECAG00000022260	-	100	83.948	ENSCAFG00020020007	-	100	83.948	Canis_lupus_dingo
ENSECAG00000022260	-	100	87.202	ENSCPBG00000000748	-	100	87.202	Chrysemys_picta_bellii
ENSECAG00000022260	-	100	86.768	ENSCPBG00000000646	-	100	86.768	Chrysemys_picta_bellii
ENSECAG00000022260	-	99	87.609	ENSDARG00000020850	eef1a1l1	99	87.609	Danio_rerio
ENSECAG00000022260	-	85	91.878	ENSEASG00005018013	-	99	91.878	Equus_asinus_asinus
ENSECAG00000022260	-	98	96.256	ENSEASG00005012365	-	99	95.238	Equus_asinus_asinus
ENSECAG00000022260	-	100	86.117	ENSELUG00000023536	eef1a1l1	100	86.117	Esox_lucius
ENSECAG00000022260	-	100	92.842	ENSFCAG00000030530	-	100	92.842	Felis_catus
ENSECAG00000022260	-	100	87.419	ENSGAGG00000000642	-	100	87.419	Gopherus_agassizii
ENSECAG00000022260	-	100	87.419	ENSGAGG00000000648	-	100	87.419	Gopherus_agassizii
ENSECAG00000022260	-	89	84.504	ENSLBEG00000002790	eef1a1l1	99	84.504	Labrus_bergylta
ENSECAG00000022260	-	100	85.033	ENSLAFG00000028081	-	99	85.033	Loxodonta_africana
ENSECAG00000022260	-	100	92.625	ENSLAFG00000025161	-	100	92.625	Loxodonta_africana
ENSECAG00000022260	-	74	89.017	ENSOANG00000012066	-	100	89.017	Ornithorhynchus_anatinus
ENSECAG00000022260	-	89	85.472	ENSOMEG00000006888	-	99	85.472	Oryzias_melastigma
ENSECAG00000022260	-	100	91.540	ENSOARG00000002943	-	100	91.540	Ovis_aries
ENSECAG00000022260	-	100	83.514	ENSPPRG00000008525	-	100	83.514	Panthera_pardus
ENSECAG00000022260	-	99	91.886	ENSPPRG00000005678	-	98	91.886	Panthera_pardus
ENSECAG00000022260	-	100	85.249	ENSPTIG00000006939	-	100	85.249	Panthera_tigris_altaica
ENSECAG00000022260	-	100	87.419	ENSPSIG00000008610	-	100	87.419	Pelodiscus_sinensis
ENSECAG00000022260	-	67	95.370	ENSPVAG00000007682	-	65	95.370	Pteropus_vampyrus
ENSECAG00000022260	-	100	79.826	ENSSMAG00000018455	-	99	79.826	Scophthalmus_maximus
ENSECAG00000022260	-	100	86.768	ENSSPUG00000003655	-	100	86.768	Sphenodon_punctatus
ENSECAG00000022260	-	98	81.416	ENSSSCG00000038035	-	100	81.128	Sus_scrofa
ENSECAG00000022260	-	100	91.974	ENSSSCG00000034113	-	100	91.974	Sus_scrofa
ENSECAG00000022260	-	100	81.562	ENSUAMG00000008928	-	100	81.562	Ursus_americanus
ENSECAG00000022260	-	100	81.996	ENSUAMG00000007676	-	100	81.996	Ursus_americanus
ENSECAG00000022260	-	100	83.514	ENSUMAG00000013211	-	100	83.514	Ursus_maritimus
ENSECAG00000022260	-	100	83.731	ENSVVUG00000026886	-	100	83.731	Vulpes_vulpes
ENSECAG00000022260	-	100	86.985	ENSXETG00000022604	eef1a1o	100	86.985	Xenopus_tropicalis