EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000022325 (Gene tree)
Gene ID: 100072588
Gene Symbol: APEX1
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 2940 bases
Position: chr1:158849703-158852642
Accession: 15404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000019835	Exo_endo_phos	PF03372.23	3.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000023904	-	1473	XM_001505131	ENSECAP00000019835	390 (aa)	XP_001505181	F6ZB53

Gene Model

Click here to download ENSECAG00000022325's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000022325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000022325	APEX1	82	96.226	ENSG00000100823	APEX1	100	96.226	Homo_sapiens
ENSECAG00000022325	APEX1	72	69.892	ENSAPOG00000017002	apex1	99	66.007	Acanthochromis_polyacanthus
ENSECAG00000022325	APEX1	82	98.113	ENSAMEG00000005418	APEX1	100	98.113	Ailuropoda_melanoleuca
ENSECAG00000022325	APEX1	71	71.223	ENSACIG00000010653	apex1	97	70.139	Amphilophus_citrinellus
ENSECAG00000022325	APEX1	72	69.534	ENSAOCG00000009649	apex1	99	65.079	Amphiprion_ocellaris
ENSECAG00000022325	APEX1	72	69.534	ENSAPEG00000021453	apex1	99	65.079	Amphiprion_percula
ENSECAG00000022325	APEX1	81	67.089	ENSATEG00000002883	apex1	97	67.722	Anabas_testudineus
ENSECAG00000022325	APEX1	82	70.497	ENSACAG00000008099	APEX1	100	70.497	Anolis_carolinensis
ENSECAG00000022325	APEX1	82	96.541	ENSANAG00000030117	APEX1	100	96.541	Aotus_nancymaae
ENSECAG00000022325	APEX1	71	71.377	ENSACLG00000018441	apex1	99	66.246	Astatotilapia_calliptera
ENSECAG00000022325	APEX1	82	65.312	ENSAMXG00000034699	apex1	100	65.312	Astyanax_mexicanus
ENSECAG00000022325	APEX1	82	96.226	ENSBTAG00000002745	APEX1	100	96.226	Bos_taurus
ENSECAG00000022325	APEX1	65	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSECAG00000022325	APEX1	82	97.170	ENSCJAG00000009726	APEX1	100	97.170	Callithrix_jacchus
ENSECAG00000022325	APEX1	82	96.226	ENSCAFG00000032033	APEX1	100	96.226	Canis_familiaris
ENSECAG00000022325	APEX1	82	96.226	ENSCAFG00020014377	-	100	96.226	Canis_lupus_dingo
ENSECAG00000022325	APEX1	82	95.597	ENSCHIG00000007298	-	100	95.597	Capra_hircus
ENSECAG00000022325	APEX1	80	76.603	ENSCHIG00000014537	-	99	76.603	Capra_hircus
ENSECAG00000022325	APEX1	82	95.912	ENSTSYG00000034813	APEX1	100	95.912	Carlito_syrichta
ENSECAG00000022325	APEX1	61	97.881	ENSCAPG00000016235	APEX1	91	97.881	Cavia_aperea
ENSECAG00000022325	APEX1	82	95.912	ENSCPOG00000030909	APEX1	100	95.912	Cavia_porcellus
ENSECAG00000022325	APEX1	82	97.170	ENSCCAG00000033056	-	100	97.170	Cebus_capucinus
ENSECAG00000022325	APEX1	82	83.333	ENSCCAG00000031931	-	100	83.333	Cebus_capucinus
ENSECAG00000022325	APEX1	82	95.912	ENSCATG00000015580	APEX1	100	95.912	Cercocebus_atys
ENSECAG00000022325	APEX1	82	96.226	ENSCLAG00000001002	APEX1	100	96.226	Chinchilla_lanigera
ENSECAG00000022325	APEX1	82	95.597	ENSCSAG00000016685	-	100	95.597	Chlorocebus_sabaeus
ENSECAG00000022325	APEX1	82	95.597	ENSCSAG00000016670	-	100	95.597	Chlorocebus_sabaeus
ENSECAG00000022325	APEX1	82	71.473	ENSCPBG00000009567	APEX1	100	71.473	Chrysemys_picta_bellii
ENSECAG00000022325	APEX1	80	53.185	ENSCING00000008137	-	94	53.185	Ciona_intestinalis
ENSECAG00000022325	APEX1	73	47.667	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSECAG00000022325	APEX1	82	95.912	ENSCANG00000030726	APEX1	100	95.912	Colobus_angolensis_palliatus
ENSECAG00000022325	APEX1	82	91.824	ENSCGRG00001017046	Apex1	100	91.824	Cricetulus_griseus_chok1gshd
ENSECAG00000022325	APEX1	82	91.824	ENSCGRG00000008984	Apex1	100	91.824	Cricetulus_griseus_crigri
ENSECAG00000022325	APEX1	81	65.300	ENSCSEG00000017499	apex1	99	65.300	Cynoglossus_semilaevis
ENSECAG00000022325	APEX1	72	71.685	ENSCVAG00000022075	apex1	99	66.772	Cyprinodon_variegatus
ENSECAG00000022325	APEX1	82	66.038	ENSDARG00000045843	apex1	100	66.352	Danio_rerio
ENSECAG00000022325	APEX1	86	89.881	ENSDNOG00000042234	APEX1	100	89.881	Dasypus_novemcinctus
ENSECAG00000022325	APEX1	82	96.855	ENSDORG00000001616	Apex1	100	96.855	Dipodomys_ordii
ENSECAG00000022325	APEX1	82	94.969	ENSETEG00000004855	-	100	94.969	Echinops_telfairi
ENSECAG00000022325	APEX1	61	64.435	ENSEBUG00000000622	-	92	64.435	Eptatretus_burgeri
ENSECAG00000022325	APEX1	100	90.046	ENSEASG00005017489	APEX1	100	90.046	Equus_asinus_asinus
ENSECAG00000022325	APEX1	74	94.792	ENSEEUG00000012569	APEX1	100	94.792	Erinaceus_europaeus
ENSECAG00000022325	APEX1	82	66.352	ENSELUG00000021706	apex1	100	66.352	Esox_lucius
ENSECAG00000022325	APEX1	96	92.021	ENSFCAG00000030869	APEX1	100	98.113	Felis_catus
ENSECAG00000022325	APEX1	82	95.283	ENSFDAG00000006120	APEX1	100	95.283	Fukomys_damarensis
ENSECAG00000022325	APEX1	87	63.905	ENSFHEG00000009031	apex1	89	63.905	Fundulus_heteroclitus
ENSECAG00000022325	APEX1	81	62.025	ENSGMOG00000007943	apex1	99	62.025	Gadus_morhua
ENSECAG00000022325	APEX1	72	72.760	ENSGAFG00000005311	apex1	99	67.812	Gambusia_affinis
ENSECAG00000022325	APEX1	81	64.873	ENSGACG00000019497	apex1	99	69.549	Gasterosteus_aculeatus
ENSECAG00000022325	APEX1	82	71.160	ENSGAGG00000014999	APEX1	100	71.160	Gopherus_agassizii
ENSECAG00000022325	APEX1	82	96.541	ENSGGOG00000002128	APEX1	100	96.541	Gorilla_gorilla
ENSECAG00000022325	APEX1	81	65.506	ENSHBUG00000005894	apex1	99	66.139	Haplochromis_burtoni
ENSECAG00000022325	APEX1	82	96.226	ENSHGLG00000002848	APEX1	100	96.226	Heterocephalus_glaber_female
ENSECAG00000022325	APEX1	82	96.226	ENSHGLG00100017878	APEX1	100	96.226	Heterocephalus_glaber_male
ENSECAG00000022325	APEX1	81	65.931	ENSHCOG00000009961	apex1	99	65.931	Hippocampus_comes
ENSECAG00000022325	APEX1	82	68.339	ENSIPUG00000005799	apex1	100	68.339	Ictalurus_punctatus
ENSECAG00000022325	APEX1	82	95.597	ENSSTOG00000010096	APEX1	100	95.597	Ictidomys_tridecemlineatus
ENSECAG00000022325	APEX1	82	85.849	ENSJJAG00000003660	-	100	85.849	Jaculus_jaculus
ENSECAG00000022325	APEX1	76	86.242	ENSJJAG00000020465	-	96	86.242	Jaculus_jaculus
ENSECAG00000022325	APEX1	82	95.597	ENSJJAG00000012067	-	100	95.597	Jaculus_jaculus
ENSECAG00000022325	APEX1	72	71.685	ENSKMAG00000021171	apex1	99	66.456	Kryptolebias_marmoratus
ENSECAG00000022325	APEX1	72	68.459	ENSLBEG00000010248	apex1	99	64.353	Labrus_bergylta
ENSECAG00000022325	APEX1	82	67.188	ENSLACG00000008617	APEX1	100	67.188	Latimeria_chalumnae
ENSECAG00000022325	APEX1	82	66.873	ENSLOCG00000015516	apex1	99	66.873	Lepisosteus_oculatus
ENSECAG00000022325	APEX1	82	94.654	ENSLAFG00000021872	APEX1	100	94.654	Loxodonta_africana
ENSECAG00000022325	APEX1	82	95.912	ENSMFAG00000002565	APEX1	100	95.912	Macaca_fascicularis
ENSECAG00000022325	APEX1	82	95.912	ENSMMUG00000048039	APEX1	100	95.912	Macaca_mulatta
ENSECAG00000022325	APEX1	82	95.912	ENSMNEG00000036944	APEX1	100	95.912	Macaca_nemestrina
ENSECAG00000022325	APEX1	82	95.912	ENSMLEG00000042125	APEX1	100	95.912	Mandrillus_leucophaeus
ENSECAG00000022325	APEX1	72	71.685	ENSMAMG00000023526	apex1	99	67.508	Mastacembelus_armatus
ENSECAG00000022325	APEX1	71	71.377	ENSMZEG00005014187	apex1	99	66.246	Maylandia_zebra
ENSECAG00000022325	APEX1	82	92.767	ENSMAUG00000013994	Apex1	100	92.767	Mesocricetus_auratus
ENSECAG00000022325	APEX1	82	97.799	ENSMICG00000043554	APEX1	100	97.799	Microcebus_murinus
ENSECAG00000022325	APEX1	82	94.025	ENSMOCG00000013721	Apex1	100	94.025	Microtus_ochrogaster
ENSECAG00000022325	APEX1	72	67.857	ENSMMOG00000010031	apex1	97	64.038	Mola_mola
ENSECAG00000022325	APEX1	82	84.688	ENSMODG00000007125	APEX1	100	85.714	Monodelphis_domestica
ENSECAG00000022325	APEX1	72	64.158	ENSMALG00000011699	apex1	79	62.457	Monopterus_albus
ENSECAG00000022325	APEX1	81	94.953	MGP_CAROLIEiJ_G0019209	Apex1	99	94.953	Mus_caroli
ENSECAG00000022325	APEX1	82	95.597	ENSMUSG00000035960	Apex1	100	95.597	Mus_musculus
ENSECAG00000022325	APEX1	82	94.969	MGP_PahariEiJ_G0030232	Apex1	100	94.969	Mus_pahari
ENSECAG00000022325	APEX1	82	95.597	MGP_SPRETEiJ_G0020101	Apex1	100	95.597	Mus_spretus
ENSECAG00000022325	APEX1	82	96.562	ENSMLUG00000028957	APEX1	100	96.562	Myotis_lucifugus
ENSECAG00000022325	APEX1	82	94.654	ENSNGAG00000002725	-	100	94.654	Nannospalax_galili
ENSECAG00000022325	APEX1	72	78.136	ENSNGAG00000021748	-	86	78.136	Nannospalax_galili
ENSECAG00000022325	APEX1	71	71.014	ENSNBRG00000005334	apex1	96	63.284	Neolamprologus_brichardi
ENSECAG00000022325	APEX1	82	96.226	ENSNLEG00000010839	APEX1	100	96.226	Nomascus_leucogenys
ENSECAG00000022325	APEX1	82	87.421	ENSMEUG00000014519	APEX1	100	87.421	Notamacropus_eugenii
ENSECAG00000022325	APEX1	82	95.283	ENSOPRG00000014029	APEX1	100	95.283	Ochotona_princeps
ENSECAG00000022325	APEX1	79	76.699	ENSODEG00000004777	-	99	76.699	Octodon_degus
ENSECAG00000022325	APEX1	82	72.840	ENSODEG00000006583	-	100	72.840	Octodon_degus
ENSECAG00000022325	APEX1	82	96.541	ENSODEG00000001703	-	100	96.541	Octodon_degus
ENSECAG00000022325	APEX1	71	71.583	ENSONIG00000012089	apex1	99	66.562	Oreochromis_niloticus
ENSECAG00000022325	APEX1	100	67.830	ENSOANG00000008836	APEX1	97	68.828	Ornithorhynchus_anatinus
ENSECAG00000022325	APEX1	82	96.226	ENSOCUG00000005022	APEX1	100	96.226	Oryctolagus_cuniculus
ENSECAG00000022325	APEX1	81	66.981	ENSORLG00000012378	apex1	99	67.610	Oryzias_latipes
ENSECAG00000022325	APEX1	81	66.981	ENSORLG00020021371	apex1	99	67.610	Oryzias_latipes_hni
ENSECAG00000022325	APEX1	81	66.981	ENSORLG00015020089	apex1	99	67.610	Oryzias_latipes_hsok
ENSECAG00000022325	APEX1	81	66.981	ENSOMEG00000018876	apex1	99	67.296	Oryzias_melastigma
ENSECAG00000022325	APEX1	82	96.855	ENSOGAG00000013335	-	100	96.855	Otolemur_garnettii
ENSECAG00000022325	APEX1	80	86.218	ENSOGAG00000029355	-	100	86.218	Otolemur_garnettii
ENSECAG00000022325	APEX1	82	94.654	ENSOARG00000019740	-	100	94.654	Ovis_aries
ENSECAG00000022325	APEX1	81	81.013	ENSOARG00000014424	-	100	81.013	Ovis_aries
ENSECAG00000022325	APEX1	79	91.883	ENSOARG00000001876	-	100	91.883	Ovis_aries
ENSECAG00000022325	APEX1	82	96.541	ENSPPAG00000038760	APEX1	100	96.541	Pan_paniscus
ENSECAG00000022325	APEX1	82	97.799	ENSPPRG00000011794	APEX1	100	97.799	Panthera_pardus
ENSECAG00000022325	APEX1	82	98.113	ENSPTIG00000014829	APEX1	100	98.113	Panthera_tigris_altaica
ENSECAG00000022325	APEX1	82	96.541	ENSPTRG00000006093	APEX1	100	96.541	Pan_troglodytes
ENSECAG00000022325	APEX1	82	95.912	ENSPANG00000022757	APEX1	100	95.912	Papio_anubis
ENSECAG00000022325	APEX1	71	68.953	ENSPKIG00000003504	apex1	100	65.109	Paramormyrops_kingsleyae
ENSECAG00000022325	APEX1	62	67.220	ENSPMGG00000016596	apex1	72	67.220	Periophthalmus_magnuspinnatus
ENSECAG00000022325	APEX1	82	94.969	ENSPEMG00000019097	Apex1	100	94.969	Peromyscus_maniculatus_bairdii
ENSECAG00000022325	APEX1	77	66.000	ENSPMAG00000007275	-	99	66.000	Petromyzon_marinus
ENSECAG00000022325	APEX1	82	84.326	ENSPCIG00000023274	APEX1	100	86.293	Phascolarctos_cinereus
ENSECAG00000022325	APEX1	72	73.118	ENSPFOG00000004178	apex1	99	68.454	Poecilia_formosa
ENSECAG00000022325	APEX1	72	72.760	ENSPLAG00000012779	apex1	99	68.454	Poecilia_latipinna
ENSECAG00000022325	APEX1	72	73.118	ENSPMEG00000019623	apex1	99	68.454	Poecilia_mexicana
ENSECAG00000022325	APEX1	72	72.401	ENSPREG00000014298	apex1	99	67.823	Poecilia_reticulata
ENSECAG00000022325	APEX1	82	96.226	ENSPPYG00000005565	APEX1	100	96.226	Pongo_abelii
ENSECAG00000022325	APEX1	82	92.767	ENSPCAG00000010376	APEX1	100	92.767	Procavia_capensis
ENSECAG00000022325	APEX1	82	97.799	ENSPCOG00000021564	APEX1	100	97.799	Propithecus_coquereli
ENSECAG00000022325	APEX1	82	96.875	ENSPVAG00000010736	APEX1	100	96.875	Pteropus_vampyrus
ENSECAG00000022325	APEX1	71	71.377	ENSPNYG00000023940	apex1	99	66.246	Pundamilia_nyererei
ENSECAG00000022325	APEX1	76	66.216	ENSPNAG00000020897	apex1	96	66.102	Pygocentrus_nattereri
ENSECAG00000022325	APEX1	82	94.654	ENSRNOG00000009663	Apex1	100	94.654	Rattus_norvegicus
ENSECAG00000022325	APEX1	82	95.912	ENSRBIG00000038325	APEX1	99	95.912	Rhinopithecus_bieti
ENSECAG00000022325	APEX1	82	96.855	ENSSBOG00000018921	-	100	96.855	Saimiri_boliviensis_boliviensis
ENSECAG00000022325	APEX1	82	81.761	ENSSBOG00000031372	-	100	81.761	Saimiri_boliviensis_boliviensis
ENSECAG00000022325	APEX1	82	83.333	ENSSHAG00000013524	APEX1	100	84.049	Sarcophilus_harrisii
ENSECAG00000022325	APEX1	82	62.579	ENSSFOG00015001948	apex1	100	62.579	Scleropages_formosus
ENSECAG00000022325	APEX1	71	69.424	ENSSMAG00000013348	apex1	99	65.300	Scophthalmus_maximus
ENSECAG00000022325	APEX1	72	69.892	ENSSDUG00000016377	apex1	99	65.931	Seriola_dumerili
ENSECAG00000022325	APEX1	72	70.609	ENSSLDG00000023005	apex1	99	66.562	Seriola_lalandi_dorsalis
ENSECAG00000022325	APEX1	75	71.088	ENSSPUG00000000531	APEX1	99	71.088	Sphenodon_punctatus
ENSECAG00000022325	APEX1	72	70.251	ENSSPAG00000000458	apex1	96	68.601	Stegastes_partitus
ENSECAG00000022325	APEX1	82	55.864	ENSSSCG00000039705	-	100	55.864	Sus_scrofa
ENSECAG00000022325	APEX1	82	96.226	ENSSSCG00000040060	-	100	96.226	Sus_scrofa
ENSECAG00000022325	APEX1	61	60.169	ENSTGUG00000014378	APEX1	100	60.169	Taeniopygia_guttata
ENSECAG00000022325	APEX1	71	67.626	ENSTRUG00000004268	apex1	98	61.350	Takifugu_rubripes
ENSECAG00000022325	APEX1	81	64.557	ENSTNIG00000005778	apex1	99	64.557	Tetraodon_nigroviridis
ENSECAG00000022325	APEX1	82	92.767	ENSTBEG00000006405	APEX1	100	92.767	Tupaia_belangeri
ENSECAG00000022325	APEX1	61	96.610	ENSTTRG00000007860	APEX1	100	96.610	Tursiops_truncatus
ENSECAG00000022325	APEX1	82	98.428	ENSUAMG00000010457	APEX1	100	98.428	Ursus_americanus
ENSECAG00000022325	APEX1	82	98.428	ENSUMAG00000009178	APEX1	100	98.428	Ursus_maritimus
ENSECAG00000022325	APEX1	61	91.102	ENSVPAG00000005083	APEX1	100	91.102	Vicugna_pacos
ENSECAG00000022325	APEX1	82	95.597	ENSVVUG00000009010	APEX1	100	95.597	Vulpes_vulpes
ENSECAG00000022325	APEX1	82	66.254	ENSXETG00000024773	apex1	100	66.254	Xenopus_tropicalis
ENSECAG00000022325	APEX1	72	72.760	ENSXCOG00000015233	apex1	99	68.139	Xiphophorus_couchianus
ENSECAG00000022325	APEX1	72	72.760	ENSXMAG00000006195	apex1	99	68.139	Xiphophorus_maculatus