EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000022371 (Gene tree)
Gene ID: 100070206
Gene Symbol: APOBEC3Z1B
Alias: -
Full Name: Equus caballus apolipoprotein B mRNA-editing enzyme-catalytic polypeptide-like 3Z1b (APOBEC3Z1B)%2C mRNA.
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 3689 bases
Position: chr28:37062159-37065847
Accession: NM_001163680
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000019787	APOBEC_N	PF08210.11	2.5e-42	1	1
ENSECAP00000029297	APOBEC_N	PF08210.11	8e-29	1	1
ENSECAP00000019787	APOBEC_C	PF05240.14	1.5e-30	1	1
ENSECAP00000029297	APOBEC_C	PF05240.14	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000023854	-	675	-	ENSECAP00000019787	224 (aa)	-	F7A7A2
ENSECAT00000053229	-	798	-	ENSECAP00000029297	265 (aa)	-	-

Gene Model

Click here to download ENSECAG00000022371's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000022371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000022371	APOBEC3Z1B	100	85.714	ENSECAG00000032756	-	83	85.714
ENSECAG00000022371	APOBEC3Z1B	91	35.885	ENSECAG00000007726	APOBEC3H	81	36.181
ENSECAG00000022371	APOBEC3Z1B	86	41.081	ENSECAG00000006071	-	99	38.298
ENSECAG00000022371	APOBEC3Z1B	82	46.237	ENSECAG00000018578	AICDA	90	46.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000022371	APOBEC3Z1B	85	53.927	ENSG00000239713	APOBEC3G	96	53.927	Homo_sapiens
ENSECAG00000022371	APOBEC3Z1B	85	59.794	ENSAMEG00000010815	-	100	55.217	Ailuropoda_melanoleuca
ENSECAG00000022371	APOBEC3Z1B	85	49.697	ENSANAG00000027961	-	96	49.697	Aotus_nancymaae
ENSECAG00000022371	APOBEC3Z1B	86	56.373	ENSANAG00000020573	-	99	56.373	Aotus_nancymaae
ENSECAG00000022371	APOBEC3Z1B	88	48.990	ENSANAG00000031271	APOBEC3G	97	48.990	Aotus_nancymaae
ENSECAG00000022371	APOBEC3Z1B	85	44.920	ENSANAG00000028416	-	96	44.920	Aotus_nancymaae
ENSECAG00000022371	APOBEC3Z1B	81	54.144	ENSBTAG00000037800	-	98	54.144	Bos_taurus
ENSECAG00000022371	APOBEC3Z1B	82	53.684	ENSCJAG00000011578	-	76	53.684	Callithrix_jacchus
ENSECAG00000022371	APOBEC3Z1B	84	50.000	ENSCJAG00000023368	APOBEC3G	97	50.000	Callithrix_jacchus
ENSECAG00000022371	APOBEC3Z1B	85	45.411	ENSCAFG00000015211	-	65	45.411	Canis_familiaris
ENSECAG00000022371	APOBEC3Z1B	61	52.206	ENSCAFG00000023589	-	95	52.206	Canis_familiaris
ENSECAG00000022371	APOBEC3Z1B	89	45.238	ENSCAFG00020002641	-	88	46.117	Canis_lupus_dingo
ENSECAG00000022371	APOBEC3Z1B	88	46.500	ENSCAFG00020002661	-	80	46.524	Canis_lupus_dingo
ENSECAG00000022371	APOBEC3Z1B	82	54.348	ENSCHIG00000012694	-	93	52.688	Capra_hircus
ENSECAG00000022371	APOBEC3Z1B	86	46.465	ENSCCAG00000032232	-	95	46.465	Cebus_capucinus
ENSECAG00000022371	APOBEC3Z1B	88	41.919	ENSCCAG00000032509	-	98	41.919	Cebus_capucinus
ENSECAG00000022371	APOBEC3Z1B	86	55.000	ENSCCAG00000030928	-	96	55.000	Cebus_capucinus
ENSECAG00000022371	APOBEC3Z1B	90	48.058	ENSCCAG00000033147	-	98	47.465	Cebus_capucinus
ENSECAG00000022371	APOBEC3Z1B	89	52.601	ENSCSAG00000006376	APOBEC3G	86	52.601	Chlorocebus_sabaeus
ENSECAG00000022371	APOBEC3Z1B	76	36.517	ENSCANG00000029968	-	53	36.517	Colobus_angolensis_palliatus
ENSECAG00000022371	APOBEC3Z1B	94	39.269	ENSDNOG00000039749	-	93	38.813	Dasypus_novemcinctus
ENSECAG00000022371	APOBEC3Z1B	89	80.500	ENSEASG00005018643	-	99	74.009	Equus_asinus_asinus
ENSECAG00000022371	APOBEC3Z1B	92	53.073	ENSGGOG00000013750	APOBEC3G	95	53.073	Gorilla_gorilla
ENSECAG00000022371	APOBEC3Z1B	82	53.763	ENSLAFG00000005275	-	99	53.763	Loxodonta_africana
ENSECAG00000022371	APOBEC3Z1B	83	52.381	ENSLAFG00000020906	-	94	52.381	Loxodonta_africana
ENSECAG00000022371	APOBEC3Z1B	83	52.381	ENSLAFG00000008890	-	91	52.381	Loxodonta_africana
ENSECAG00000022371	APOBEC3Z1B	89	53.535	ENSMFAG00000044711	APOBEC3G	86	53.234	Macaca_fascicularis
ENSECAG00000022371	APOBEC3Z1B	89	53.476	ENSMMUG00000039346	APOBEC3G	93	53.030	Macaca_mulatta
ENSECAG00000022371	APOBEC3Z1B	88	53.535	ENSMNEG00000038847	APOBEC3G	93	53.535	Macaca_nemestrina
ENSECAG00000022371	APOBEC3Z1B	88	54.229	ENSMLEG00000024444	APOBEC3G	93	54.229	Mandrillus_leucophaeus
ENSECAG00000022371	APOBEC3Z1B	85	52.551	ENSMICG00000043748	-	96	52.551	Microcebus_murinus
ENSECAG00000022371	APOBEC3Z1B	81	54.011	ENSMICG00000047191	-	98	54.011	Microcebus_murinus
ENSECAG00000022371	APOBEC3Z1B	88	56.633	ENSMPUG00000013235	-	100	56.633	Mustela_putorius_furo
ENSECAG00000022371	APOBEC3Z1B	83	51.572	ENSMLUG00000000977	-	90	51.572	Myotis_lucifugus
ENSECAG00000022371	APOBEC3Z1B	50	50.442	ENSMLUG00000022226	-	100	45.833	Myotis_lucifugus
ENSECAG00000022371	APOBEC3Z1B	78	50.857	ENSMLUG00000000517	-	98	50.857	Myotis_lucifugus
ENSECAG00000022371	APOBEC3Z1B	82	51.351	ENSMLUG00000023022	-	91	50.485	Myotis_lucifugus
ENSECAG00000022371	APOBEC3Z1B	84	53.901	ENSMLUG00000008631	-	100	53.901	Myotis_lucifugus
ENSECAG00000022371	APOBEC3Z1B	84	51.471	ENSMLUG00000024853	-	92	51.471	Myotis_lucifugus
ENSECAG00000022371	APOBEC3Z1B	82	49.730	ENSMLUG00000024957	-	93	49.029	Myotis_lucifugus
ENSECAG00000022371	APOBEC3Z1B	71	52.761	ENSMLUG00000014565	-	92	47.399	Myotis_lucifugus
ENSECAG00000022371	APOBEC3Z1B	83	50.704	ENSMLUG00000026771	-	76	50.704	Myotis_lucifugus
ENSECAG00000022371	APOBEC3Z1B	75	47.059	ENSMLUG00000028652	-	88	44.000	Myotis_lucifugus
ENSECAG00000022371	APOBEC3Z1B	81	56.977	ENSNLEG00000018922	-	95	56.977	Nomascus_leucogenys
ENSECAG00000022371	APOBEC3Z1B	81	49.189	ENSOPRG00000002326	-	98	49.189	Ochotona_princeps
ENSECAG00000022371	APOBEC3Z1B	77	52.514	ENSOCUG00000023532	-	68	52.514	Oryctolagus_cuniculus
ENSECAG00000022371	APOBEC3Z1B	83	58.201	ENSOGAG00000032518	-	97	58.201	Otolemur_garnettii
ENSECAG00000022371	APOBEC3Z1B	86	54.229	ENSOGAG00000024822	-	98	54.229	Otolemur_garnettii
ENSECAG00000022371	APOBEC3Z1B	81	53.846	ENSOARG00000016213	APOBEC3Z1	98	53.846	Ovis_aries
ENSECAG00000022371	APOBEC3Z1B	85	53.608	ENSPPAG00000033277	-	82	51.163	Pan_paniscus
ENSECAG00000022371	APOBEC3Z1B	85	53.403	ENSPTRG00000014387	APOBEC3G	96	53.403	Pan_troglodytes
ENSECAG00000022371	APOBEC3Z1B	88	54.737	ENSPPYG00000011833	APOBEC3G	93	54.737	Pongo_abelii
ENSECAG00000022371	APOBEC3Z1B	87	49.000	ENSPCAG00000015518	-	69	47.887	Procavia_capensis
ENSECAG00000022371	APOBEC3Z1B	59	58.647	ENSPCAG00000001848	-	96	58.647	Procavia_capensis
ENSECAG00000022371	APOBEC3Z1B	79	57.377	ENSPCOG00000016357	-	90	57.377	Propithecus_coquereli
ENSECAG00000022371	APOBEC3Z1B	86	53.846	ENSPVAG00000004045	-	98	53.846	Pteropus_vampyrus
ENSECAG00000022371	APOBEC3Z1B	88	54.639	ENSRBIG00000035436	APOBEC3G	91	54.450	Rhinopithecus_bieti
ENSECAG00000022371	APOBEC3Z1B	95	51.010	ENSSBOG00000018208	-	99	51.010	Saimiri_boliviensis_boliviensis
ENSECAG00000022371	APOBEC3Z1B	86	53.769	ENSSBOG00000029091	-	96	53.769	Saimiri_boliviensis_boliviensis
ENSECAG00000022371	APOBEC3Z1B	89	48.485	ENSSBOG00000026566	-	99	48.485	Saimiri_boliviensis_boliviensis
ENSECAG00000022371	APOBEC3Z1B	89	49.282	ENSSBOG00000023468	-	82	49.282	Saimiri_boliviensis_boliviensis
ENSECAG00000022371	APOBEC3Z1B	81	48.663	ENSSBOG00000025673	-	87	48.663	Saimiri_boliviensis_boliviensis
ENSECAG00000022371	APOBEC3Z1B	95	49.254	ENSSBOG00000021384	-	97	49.254	Saimiri_boliviensis_boliviensis
ENSECAG00000022371	APOBEC3Z1B	81	59.341	ENSTTRG00000009395	-	92	59.341	Tursiops_truncatus
ENSECAG00000022371	APOBEC3Z1B	86	55.612	ENSUMAG00000014447	-	99	55.612	Ursus_maritimus
ENSECAG00000022371	APOBEC3Z1B	85	56.701	ENSUMAG00000002249	-	92	56.701	Ursus_maritimus
ENSECAG00000022371	APOBEC3Z1B	62	40.698	ENSVVUG00000022583	-	73	40.698	Vulpes_vulpes