EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000022743 (Gene tree)
Gene ID: 100049940
Gene Symbol: GPATCH1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 33349 bases
Position: chr10:4369713-4403061
Accession: 18476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000020340	DUF1604	PF07713.13	2.7e-35	1	1
ENSECAP00000020340	G-patch	PF01585.23	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000024483	-	2892	-	ENSECAP00000020340	963 (aa)	-	F6W6L1

Gene Model

Click here to download ENSECAG00000022743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000022743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000022743	GPATCH1	88	88.837	ENSG00000076650	GPATCH1	94	88.787	Homo_sapiens
ENSECAG00000022743	GPATCH1	88	90.941	ENSAMEG00000015575	GPATCH1	94	91.180	Ailuropoda_melanoleuca
ENSECAG00000022743	GPATCH1	79	69.613	ENSAOCG00000006668	gpatch1	77	69.613	Amphiprion_ocellaris
ENSECAG00000022743	GPATCH1	79	54.534	ENSAPEG00000000026	gpatch1	90	52.074	Amphiprion_percula
ENSECAG00000022743	GPATCH1	79	52.658	ENSATEG00000014494	gpatch1	90	50.971	Anabas_testudineus
ENSECAG00000022743	GPATCH1	87	61.969	ENSAPLG00000007584	GPATCH1	96	61.406	Anas_platyrhynchos
ENSECAG00000022743	GPATCH1	88	88.132	ENSANAG00000027002	GPATCH1	94	88.101	Aotus_nancymaae
ENSECAG00000022743	GPATCH1	79	55.159	ENSACLG00000024740	gpatch1	83	54.523	Astatotilapia_calliptera
ENSECAG00000022743	GPATCH1	89	52.202	ENSAMXG00000020177	gpatch1	99	52.804	Astyanax_mexicanus
ENSECAG00000022743	GPATCH1	88	90.106	ENSBTAG00000000721	GPATCH1	94	90.149	Bos_taurus
ENSECAG00000022743	GPATCH1	66	30.687	WBGene00011109	R07E5.1	68	31.108	Caenorhabditis_elegans
ENSECAG00000022743	GPATCH1	88	87.529	ENSCJAG00000000684	GPATCH1	94	87.414	Callithrix_jacchus
ENSECAG00000022743	GPATCH1	88	90.012	ENSCAFG00000007457	GPATCH1	79	90.160	Canis_familiaris
ENSECAG00000022743	GPATCH1	92	89.302	ENSCAFG00020019731	GPATCH1	95	89.302	Canis_lupus_dingo
ENSECAG00000022743	GPATCH1	88	90.577	ENSCHIG00000019626	GPATCH1	94	90.493	Capra_hircus
ENSECAG00000022743	GPATCH1	85	79.323	ENSCAPG00000008827	GPATCH1	93	79.671	Cavia_aperea
ENSECAG00000022743	GPATCH1	88	81.829	ENSCPOG00000024477	GPATCH1	94	82.192	Cavia_porcellus
ENSECAG00000022743	GPATCH1	88	87.662	ENSCCAG00000024676	GPATCH1	94	87.643	Cebus_capucinus
ENSECAG00000022743	GPATCH1	88	88.954	ENSCATG00000043637	GPATCH1	94	88.902	Cercocebus_atys
ENSECAG00000022743	GPATCH1	86	83.053	ENSCLAG00000003395	-	94	83.195	Chinchilla_lanigera
ENSECAG00000022743	GPATCH1	88	86.502	ENSCSAG00000004743	GPATCH1	94	86.514	Chlorocebus_sabaeus
ENSECAG00000022743	GPATCH1	80	80.415	ENSCHOG00000012865	GPATCH1	89	80.415	Choloepus_hoffmanni
ENSECAG00000022743	GPATCH1	76	69.631	ENSCPBG00000000666	GPATCH1	92	69.631	Chrysemys_picta_bellii
ENSECAG00000022743	GPATCH1	66	37.558	ENSCING00000012518	-	84	35.714	Ciona_intestinalis
ENSECAG00000022743	GPATCH1	79	84.568	ENSCANG00000012540	GPATCH1	93	84.726	Colobus_angolensis_palliatus
ENSECAG00000022743	GPATCH1	85	82.246	ENSCGRG00001016736	Gpatch1	94	82.374	Cricetulus_griseus_chok1gshd
ENSECAG00000022743	GPATCH1	86	67.967	ENSCGRG00000005069	Gpatch1	93	68.470	Cricetulus_griseus_crigri
ENSECAG00000022743	GPATCH1	76	51.435	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
ENSECAG00000022743	GPATCH1	87	50.715	ENSDARG00000033418	gpatch1	92	51.432	Danio_rerio
ENSECAG00000022743	GPATCH1	88	86.722	ENSDNOG00000005291	GPATCH1	98	86.530	Dasypus_novemcinctus
ENSECAG00000022743	GPATCH1	91	79.247	ENSDORG00000012546	Gpatch1	97	79.247	Dipodomys_ordii
ENSECAG00000022743	GPATCH1	67	33.429	FBgn0036386	CG8833	67	33.429	Drosophila_melanogaster
ENSECAG00000022743	GPATCH1	88	76.616	ENSETEG00000003626	GPATCH1	95	76.773	Echinops_telfairi
ENSECAG00000022743	GPATCH1	91	37.077	ENSEBUG00000011286	gpatch1	94	37.057	Eptatretus_burgeri
ENSECAG00000022743	GPATCH1	88	98.223	ENSEASG00005021162	GPATCH1	93	98.507	Equus_asinus_asinus
ENSECAG00000022743	GPATCH1	75	79.412	ENSEEUG00000012925	GPATCH1	77	79.412	Erinaceus_europaeus
ENSECAG00000022743	GPATCH1	88	50.452	ENSELUG00000018195	gpatch1	90	50.731	Esox_lucius
ENSECAG00000022743	GPATCH1	88	90.118	ENSFCAG00000014917	GPATCH1	94	90.378	Felis_catus
ENSECAG00000022743	GPATCH1	89	62.373	ENSFALG00000007821	GPATCH1	89	64.403	Ficedula_albicollis
ENSECAG00000022743	GPATCH1	86	83.152	ENSFDAG00000003871	GPATCH1	94	83.039	Fukomys_damarensis
ENSECAG00000022743	GPATCH1	86	51.276	ENSGMOG00000003830	gpatch1	95	51.276	Gadus_morhua
ENSECAG00000022743	GPATCH1	90	63.667	ENSGALG00000004839	GPATCH1	94	63.232	Gallus_gallus
ENSECAG00000022743	GPATCH1	88	49.593	ENSGACG00000017544	gpatch1	94	49.710	Gasterosteus_aculeatus
ENSECAG00000022743	GPATCH1	88	65.376	ENSGAGG00000010067	GPATCH1	91	65.258	Gopherus_agassizii
ENSECAG00000022743	GPATCH1	87	88.024	ENSGGOG00000010862	GPATCH1	94	88.693	Gorilla_gorilla
ENSECAG00000022743	GPATCH1	79	55.570	ENSHBUG00000023462	gpatch1	90	52.223	Haplochromis_burtoni
ENSECAG00000022743	GPATCH1	88	84.742	ENSHGLG00000009334	GPATCH1	94	84.800	Heterocephalus_glaber_female
ENSECAG00000022743	GPATCH1	88	84.859	ENSHGLG00100018074	GPATCH1	94	84.914	Heterocephalus_glaber_male
ENSECAG00000022743	GPATCH1	90	52.093	ENSIPUG00000014977	gpatch1	90	53.295	Ictalurus_punctatus
ENSECAG00000022743	GPATCH1	88	86.134	ENSSTOG00000003720	GPATCH1	94	86.384	Ictidomys_tridecemlineatus
ENSECAG00000022743	GPATCH1	88	83.746	ENSJJAG00000023765	Gpatch1	94	83.734	Jaculus_jaculus
ENSECAG00000022743	GPATCH1	87	52.326	ENSKMAG00000017950	gpatch1	89	52.839	Kryptolebias_marmoratus
ENSECAG00000022743	GPATCH1	85	58.493	ENSLACG00000008130	GPATCH1	90	58.802	Latimeria_chalumnae
ENSECAG00000022743	GPATCH1	79	57.956	ENSLOCG00000001800	gpatch1	90	55.981	Lepisosteus_oculatus
ENSECAG00000022743	GPATCH1	88	88.706	ENSLAFG00000013589	GPATCH1	94	89.003	Loxodonta_africana
ENSECAG00000022743	GPATCH1	88	88.312	ENSMFAG00000034418	GPATCH1	96	88.312	Macaca_fascicularis
ENSECAG00000022743	GPATCH1	88	88.498	ENSMMUG00000011790	GPATCH1	94	88.457	Macaca_mulatta
ENSECAG00000022743	GPATCH1	88	88.249	ENSMNEG00000045084	GPATCH1	94	88.215	Macaca_nemestrina
ENSECAG00000022743	GPATCH1	88	76.851	ENSMLEG00000043840	GPATCH1	93	77.002	Mandrillus_leucophaeus
ENSECAG00000022743	GPATCH1	79	55.032	ENSMZEG00005001926	gpatch1	83	54.401	Maylandia_zebra
ENSECAG00000022743	GPATCH1	88	64.664	ENSMGAG00000005775	GPATCH1	89	64.516	Meleagris_gallopavo
ENSECAG00000022743	GPATCH1	87	79.009	ENSMICG00000004829	GPATCH1	93	79.245	Microcebus_murinus
ENSECAG00000022743	GPATCH1	88	82.924	ENSMOCG00000000174	Gpatch1	95	83.030	Microtus_ochrogaster
ENSECAG00000022743	GPATCH1	78	51.331	ENSMMOG00000002140	gpatch1	87	52.086	Mola_mola
ENSECAG00000022743	GPATCH1	88	74.413	ENSMODG00000012226	GPATCH1	90	74.413	Monodelphis_domestica
ENSECAG00000022743	GPATCH1	79	52.926	ENSMALG00000014386	gpatch1	90	50.455	Monopterus_albus
ENSECAG00000022743	GPATCH1	90	84.125	ENSMUSG00000063808	Gpatch1	100	93.878	Mus_musculus
ENSECAG00000022743	GPATCH1	90	83.699	MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	Mus_pahari
ENSECAG00000022743	GPATCH1	90	83.912	MGP_SPRETEiJ_G0030681	Gpatch1	100	94.898	Mus_spretus
ENSECAG00000022743	GPATCH1	88	89.529	ENSMPUG00000007658	GPATCH1	94	89.805	Mustela_putorius_furo
ENSECAG00000022743	GPATCH1	88	89.059	ENSMLUG00000012161	GPATCH1	94	89.233	Myotis_lucifugus
ENSECAG00000022743	GPATCH1	88	84.489	ENSNGAG00000012455	Gpatch1	94	84.536	Nannospalax_galili
ENSECAG00000022743	GPATCH1	88	88.367	ENSNLEG00000007659	GPATCH1	94	88.330	Nomascus_leucogenys
ENSECAG00000022743	GPATCH1	75	67.764	ENSMEUG00000015174	GPATCH1	78	67.764	Notamacropus_eugenii
ENSECAG00000022743	GPATCH1	88	81.002	ENSODEG00000007103	GPATCH1	94	81.385	Octodon_degus
ENSECAG00000022743	GPATCH1	79	55.959	ENSONIG00000003302	gpatch1	91	53.882	Oreochromis_niloticus
ENSECAG00000022743	GPATCH1	90	72.706	ENSOANG00000012732	GPATCH1	91	74.232	Ornithorhynchus_anatinus
ENSECAG00000022743	GPATCH1	88	87.647	ENSOCUG00000015905	GPATCH1	94	87.629	Oryctolagus_cuniculus
ENSECAG00000022743	GPATCH1	87	51.240	ENSORLG00000018706	gpatch1	88	51.348	Oryzias_latipes
ENSECAG00000022743	GPATCH1	87	49.536	ENSOMEG00000022688	gpatch1	90	49.826	Oryzias_melastigma
ENSECAG00000022743	GPATCH1	82	88.243	ENSOGAG00000004016	GPATCH1	100	88.243	Otolemur_garnettii
ENSECAG00000022743	GPATCH1	87	89.905	ENSOARG00000004365	GPATCH1	93	89.838	Ovis_aries
ENSECAG00000022743	GPATCH1	88	88.249	ENSPPAG00000020990	GPATCH1	94	88.215	Pan_paniscus
ENSECAG00000022743	GPATCH1	88	90.000	ENSPPRG00000017245	GPATCH1	94	90.263	Panthera_pardus
ENSECAG00000022743	GPATCH1	88	90.706	ENSPTIG00000019649	GPATCH1	94	90.951	Panthera_tigris_altaica
ENSECAG00000022743	GPATCH1	88	88.367	ENSPTRG00000010803	GPATCH1	94	88.330	Pan_troglodytes
ENSECAG00000022743	GPATCH1	88	88.719	ENSPANG00000012374	GPATCH1	99	87.783	Papio_anubis
ENSECAG00000022743	GPATCH1	78	57.452	ENSPKIG00000020745	gpatch1	80	57.301	Paramormyrops_kingsleyae
ENSECAG00000022743	GPATCH1	88	64.795	ENSPSIG00000013433	GPATCH1	91	64.802	Pelodiscus_sinensis
ENSECAG00000022743	GPATCH1	88	83.294	ENSPEMG00000000636	Gpatch1	94	83.391	Peromyscus_maniculatus_bairdii
ENSECAG00000022743	GPATCH1	88	75.000	ENSPCIG00000021003	GPATCH1	95	75.118	Phascolarctos_cinereus
ENSECAG00000022743	GPATCH1	71	49.856	ENSPREG00000008264	gpatch1	97	45.761	Poecilia_reticulata
ENSECAG00000022743	GPATCH1	88	85.546	ENSPPYG00000009824	GPATCH1	94	85.584	Pongo_abelii
ENSECAG00000022743	GPATCH1	80	78.673	ENSPCAG00000005931	GPATCH1	86	79.233	Procavia_capensis
ENSECAG00000022743	GPATCH1	90	81.818	ENSPCOG00000009674	GPATCH1	97	83.117	Propithecus_coquereli
ENSECAG00000022743	GPATCH1	80	87.978	ENSPVAG00000017767	GPATCH1	85	90.625	Pteropus_vampyrus
ENSECAG00000022743	GPATCH1	79	55.499	ENSPNYG00000018189	gpatch1	92	54.680	Pundamilia_nyererei
ENSECAG00000022743	GPATCH1	88	52.915	ENSPNAG00000013187	gpatch1	90	53.423	Pygocentrus_nattereri
ENSECAG00000022743	GPATCH1	90	84.125	ENSRNOG00000011584	Gpatch1	94	84.078	Rattus_norvegicus
ENSECAG00000022743	GPATCH1	90	80.809	ENSRBIG00000034723	GPATCH1	92	81.765	Rhinopithecus_bieti
ENSECAG00000022743	GPATCH1	88	88.954	ENSRROG00000024428	GPATCH1	94	89.016	Rhinopithecus_roxellana
ENSECAG00000022743	GPATCH1	88	87.779	ENSSBOG00000034650	GPATCH1	94	87.757	Saimiri_boliviensis_boliviensis
ENSECAG00000022743	GPATCH1	88	74.678	ENSSHAG00000016016	GPATCH1	90	75.000	Sarcophilus_harrisii
ENSECAG00000022743	GPATCH1	79	55.669	ENSSFOG00015011535	gpatch1	89	53.518	Scleropages_formosus
ENSECAG00000022743	GPATCH1	79	49.694	ENSSMAG00000002883	gpatch1	93	47.255	Scophthalmus_maximus
ENSECAG00000022743	GPATCH1	79	52.941	ENSSDUG00000007444	gpatch1	90	50.000	Seriola_dumerili
ENSECAG00000022743	GPATCH1	79	53.008	ENSSLDG00000002856	gpatch1	93	51.773	Seriola_lalandi_dorsalis
ENSECAG00000022743	GPATCH1	70	85.567	ENSSARG00000004108	GPATCH1	72	86.053	Sorex_araneus
ENSECAG00000022743	GPATCH1	88	90.695	ENSSSCG00000002865	GPATCH1	99	88.606	Sus_scrofa
ENSECAG00000022743	GPATCH1	89	63.857	ENSTGUG00000009401	GPATCH1	91	63.863	Taeniopygia_guttata
ENSECAG00000022743	GPATCH1	79	52.089	ENSTRUG00000005785	-	90	49.591	Takifugu_rubripes
ENSECAG00000022743	GPATCH1	79	52.089	ENSTRUG00000025081	gpatch1	90	49.591	Takifugu_rubripes
ENSECAG00000022743	GPATCH1	79	53.178	ENSTNIG00000002554	gpatch1	99	53.904	Tetraodon_nigroviridis
ENSECAG00000022743	GPATCH1	61	76.755	ENSTBEG00000007750	-	84	76.755	Tupaia_belangeri
ENSECAG00000022743	GPATCH1	88	82.277	ENSTTRG00000012221	GPATCH1	94	82.534	Tursiops_truncatus
ENSECAG00000022743	GPATCH1	89	86.606	ENSUMAG00000014645	GPATCH1	97	90.223	Ursus_maritimus
ENSECAG00000022743	GPATCH1	77	98.286	ENSVPAG00000010313	GPATCH1	88	98.370	Vicugna_pacos
ENSECAG00000022743	GPATCH1	92	89.189	ENSVVUG00000016572	GPATCH1	95	89.189	Vulpes_vulpes
ENSECAG00000022743	GPATCH1	89	52.560	ENSXETG00000018276	gpatch1	94	53.694	Xenopus_tropicalis