EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000022750 (Gene tree)
Gene ID: 100059695
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 5891 bases
Position: chr13:10441255-10447145
Accession: 100059695
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000020230	RNA_pol_L_2	PF13656.6	3.9e-29	1	1
ENSECAP00000044822	RNA_pol_L_2	PF13656.6	4.4e-29	1	1
ENSECAP00000037392	RNA_pol_L_2	PF13656.6	7.3e-29	1	1
ENSECAP00000030107	RNA_pol_L_2	PF13656.6	3.3e-18	1	1
ENSECAP00000020230	RNA_pol_L	PF01193.24	4.4e-10	1	1
ENSECAP00000044822	RNA_pol_L	PF01193.24	4.9e-10	1	1
ENSECAP00000037392	RNA_pol_L	PF01193.24	7.9e-10	1	1
ENSECAP00000030107	RNA_pol_L	PF01193.24	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000024359	-	336	-	ENSECAP00000020230	111 (aa)	-	F6UQB8
ENSECAT00000052291	-	264	-	ENSECAP00000030107	87 (aa)	-	UPI0000F4F017
ENSECAT00000035944	-	354	-	ENSECAP00000044822	117 (aa)	XP_001504521	UPI000000B2C2
ENSECAT00000047925	-	429	-	ENSECAP00000037392	142 (aa)	-	-

Gene Model

Click here to download ENSECAG00000022750's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03020	RNA polymerase	KEGG
ecb05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000022750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000022750	-	100	100.000	ENSANAG00000020385	-	100	100.000	Aotus_nancymaae
ENSECAG00000022750	-	100	100.000	ENSBTAG00000005446	POLR2J	100	100.000	Bos_taurus
ENSECAG00000022750	-	100	100.000	ENSCAFG00020013154	-	100	100.000	Canis_lupus_dingo
ENSECAG00000022750	-	100	100.000	ENSCHIG00000009008	-	100	100.000	Capra_hircus
ENSECAG00000022750	-	96	91.964	ENSCAPG00000013625	-	96	91.964	Cavia_aperea
ENSECAG00000022750	-	100	100.000	ENSCCAG00000029378	-	100	100.000	Cebus_capucinus
ENSECAG00000022750	-	68	100.000	ENSCHOG00000008325	-	85	75.532	Choloepus_hoffmanni
ENSECAG00000022750	-	85	99.000	ENSCPBG00000027774	-	84	99.000	Chrysemys_picta_bellii
ENSECAG00000022750	-	94	76.829	ENSGGOG00000043186	-	86	76.829	Gorilla_gorilla
ENSECAG00000022750	-	80	97.753	ENSGGOG00000038950	-	53	97.802	Gorilla_gorilla
ENSECAG00000022750	-	79	85.915	ENSGGOG00000003934	-	84	85.915	Gorilla_gorilla
ENSECAG00000022750	-	69	95.000	ENSLACG00000022567	-	59	93.548	Latimeria_chalumnae
ENSECAG00000022750	-	100	100.000	ENSMFAG00000039168	-	100	100.000	Macaca_fascicularis
ENSECAG00000022750	-	100	100.000	ENSMLEG00000033262	-	100	100.000	Mandrillus_leucophaeus
ENSECAG00000022750	-	100	100.000	ENSMICG00000010323	-	100	100.000	Microcebus_murinus
ENSECAG00000022750	-	89	87.013	ENSPTRG00000050290	-	87	87.013	Pan_troglodytes
ENSECAG00000022750	-	100	100.000	ENSPTRG00000019132	-	100	100.000	Pan_troglodytes
ENSECAG00000022750	-	97	76.190	ENSPTRG00000028611	-	54	96.667	Pan_troglodytes
ENSECAG00000022750	-	69	85.000	ENSPTRG00000052689	-	57	72.527	Pan_troglodytes
ENSECAG00000022750	-	100	100.000	ENSPANG00000015179	-	100	100.000	Papio_anubis
ENSECAG00000022750	-	100	96.581	ENSPKIG00000013014	-	100	96.581	Paramormyrops_kingsleyae
ENSECAG00000022750	-	95	100.000	ENSPCAG00000003269	-	62	100.000	Procavia_capensis
ENSECAG00000022750	-	100	100.000	ENSRBIG00000042413	-	100	100.000	Rhinopithecus_bieti
ENSECAG00000022750	-	100	100.000	ENSRROG00000035578	-	100	100.000	Rhinopithecus_roxellana
ENSECAG00000022750	-	84	95.699	ENSTTRG00000014846	-	87	80.328	Tursiops_truncatus
ENSECAG00000022750	-	99	71.818	ENSVPAG00000007077	-	76	63.158	Vicugna_pacos
ENSECAG00000022750	-	100	100.000	ENSVVUG00000023727	-	100	100.000	Vulpes_vulpes