EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000022843 (Gene tree)
Gene ID: 100050744
Gene Symbol: ZC3H13
Alias: -
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 89676 bases
Position: chr17:24506458-24596133
Accession: 25164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000041881	zf-CCCH	PF00642.24	9.7e-07	1	1
ENSECAP00000036713	zf-CCCH	PF00642.24	1e-06	1	1
ENSECAP00000020384	zf-CCCH	PF00642.24	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000024533	-	4980	-	ENSECAP00000020384	1656 (aa)	XP_005601287	F6VSX9
ENSECAT00000049161	-	5064	-	ENSECAP00000036713	1684 (aa)	XP_014587579	UPI000717D209
ENSECAT00000042542	-	4866	-	ENSECAP00000041881	1618 (aa)	XP_014587584	UPI000717C4BC

Gene Model

Click here to download ENSECAG00000022843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000022843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000022843	ZC3H13	54	89.384	ENSAMEG00000013117	ZC3H13	53	89.931	Ailuropoda_melanoleuca
ENSECAG00000022843	ZC3H13	94	82.533	ENSAPLG00000002707	ZC3H13	66	78.676	Anas_platyrhynchos
ENSECAG00000022843	ZC3H13	54	86.976	ENSANAG00000033079	ZC3H13	53	86.863	Aotus_nancymaae
ENSECAG00000022843	ZC3H13	54	87.656	ENSCJAG00000016756	ZC3H13	53	86.976	Callithrix_jacchus
ENSECAG00000022843	ZC3H13	54	90.940	ENSCAFG00000004511	ZC3H13	53	91.514	Canis_familiaris
ENSECAG00000022843	ZC3H13	54	91.972	ENSCAFG00020019269	ZC3H13	96	96.359	Canis_lupus_dingo
ENSECAG00000022843	ZC3H13	53	86.527	ENSCHIG00000020072	ZC3H13	53	86.505	Capra_hircus
ENSECAG00000022843	ZC3H13	53	87.659	ENSTSYG00000000992	ZC3H13	53	87.543	Carlito_syrichta
ENSECAG00000022843	ZC3H13	54	87.356	ENSCPOG00000000646	ZC3H13	53	86.897	Cavia_porcellus
ENSECAG00000022843	ZC3H13	51	87.316	ENSCCAG00000032728	ZC3H13	54	87.089	Cebus_capucinus
ENSECAG00000022843	ZC3H13	54	86.406	ENSCLAG00000000610	ZC3H13	53	86.290	Chinchilla_lanigera
ENSECAG00000022843	ZC3H13	84	93.805	ENSCHOG00000009724	ZC3H13	87	93.805	Choloepus_hoffmanni
ENSECAG00000022843	ZC3H13	54	86.569	ENSCANG00000037422	ZC3H13	53	86.893	Colobus_angolensis_palliatus
ENSECAG00000022843	ZC3H13	54	86.842	ENSDNOG00000005390	ZC3H13	53	87.227	Dasypus_novemcinctus
ENSECAG00000022843	ZC3H13	53	84.174	ENSDORG00000000600	Zc3h13	53	84.571	Dipodomys_ordii
ENSECAG00000022843	ZC3H13	100	99.759	ENSEASG00005017100	ZC3H13	100	99.759	Equus_asinus_asinus
ENSECAG00000022843	ZC3H13	54	89.220	ENSFCAG00000004877	ZC3H13	52	88.902	Felis_catus
ENSECAG00000022843	ZC3H13	54	84.396	ENSFDAG00000012323	ZC3H13	52	84.414	Fukomys_damarensis
ENSECAG00000022843	ZC3H13	84	52.320	ENSGACG00000015166	zc3h13	57	54.643	Gasterosteus_aculeatus
ENSECAG00000022843	ZC3H13	54	85.714	ENSGGOG00000005496	ZC3H13	53	86.765	Gorilla_gorilla
ENSECAG00000022843	ZC3H13	54	86.468	ENSHGLG00000006309	ZC3H13	53	86.156	Heterocephalus_glaber_female
ENSECAG00000022843	ZC3H13	52	84.259	ENSJJAG00000019971	Zc3h13	53	84.198	Jaculus_jaculus
ENSECAG00000022843	ZC3H13	77	63.370	ENSKMAG00000010701	zc3h13	61	47.763	Kryptolebias_marmoratus
ENSECAG00000022843	ZC3H13	87	59.859	ENSLACG00000003806	ZC3H13	56	69.853	Latimeria_chalumnae
ENSECAG00000022843	ZC3H13	54	69.714	ENSMGAG00000014996	ZC3H13	51	70.805	Meleagris_gallopavo
ENSECAG00000022843	ZC3H13	54	86.991	ENSMICG00000014772	ZC3H13	53	86.606	Microcebus_murinus
ENSECAG00000022843	ZC3H13	53	82.225	MGP_CAROLIEiJ_G0019512	Zc3h13	64	86.508	Mus_caroli
ENSECAG00000022843	ZC3H13	53	81.995	ENSMUSG00000022000	Zc3h13	65	86.905	Mus_musculus
ENSECAG00000022843	ZC3H13	53	81.881	MGP_PahariEiJ_G0030530	Zc3h13	50	81.371	Mus_pahari
ENSECAG00000022843	ZC3H13	53	81.881	MGP_SPRETEiJ_G0020407	Zc3h13	51	81.486	Mus_spretus
ENSECAG00000022843	ZC3H13	54	87.001	ENSMLUG00000006920	ZC3H13	53	86.957	Myotis_lucifugus
ENSECAG00000022843	ZC3H13	52	82.477	ENSNGAG00000002157	Zc3h13	53	81.600	Nannospalax_galili
ENSECAG00000022843	ZC3H13	54	86.343	ENSNLEG00000002498	ZC3H13	53	86.199	Nomascus_leucogenys
ENSECAG00000022843	ZC3H13	54	87.558	ENSODEG00000005178	ZC3H13	53	87.442	Octodon_degus
ENSECAG00000022843	ZC3H13	100	79.844	ENSOCUG00000015173	ZC3H13	66	94.071	Oryctolagus_cuniculus
ENSECAG00000022843	ZC3H13	54	87.056	ENSOGAG00000012032	ZC3H13	52	86.912	Otolemur_garnettii
ENSECAG00000022843	ZC3H13	53	86.063	ENSOARG00000007790	ZC3H13	52	83.012	Ovis_aries
ENSECAG00000022843	ZC3H13	54	89.335	ENSPPRG00000005440	ZC3H13	52	89.016	Panthera_pardus
ENSECAG00000022843	ZC3H13	54	87.500	ENSPTIG00000014867	ZC3H13	53	87.071	Panthera_tigris_altaica
ENSECAG00000022843	ZC3H13	54	88.109	ENSPTRG00000005851	ZC3H13	53	87.203	Pan_troglodytes
ENSECAG00000022843	ZC3H13	92	82.819	ENSPCIG00000029529	ZC3H13	60	88.696	Phascolarctos_cinereus
ENSECAG00000022843	ZC3H13	85	95.181	ENSPCAG00000001146	ZC3H13	77	93.574	Procavia_capensis
ENSECAG00000022843	ZC3H13	63	98.378	ENSPVAG00000012353	ZC3H13	62	98.469	Pteropus_vampyrus
ENSECAG00000022843	ZC3H13	53	82.151	ENSRNOG00000011237	Zc3h13	50	82.098	Rattus_norvegicus
ENSECAG00000022843	ZC3H13	54	86.795	ENSRBIG00000010463	ZC3H13	53	87.330	Rhinopithecus_bieti
ENSECAG00000022843	ZC3H13	54	86.893	ENSSBOG00000027228	ZC3H13	53	86.667	Saimiri_boliviensis_boliviensis
ENSECAG00000022843	ZC3H13	51	94.350	ENSSARG00000007106	ZC3H13	50	94.350	Sorex_araneus
ENSECAG00000022843	ZC3H13	54	88.812	ENSSSCG00000009414	ZC3H13	52	87.471	Sus_scrofa
ENSECAG00000022843	ZC3H13	69	90.035	ENSTTRG00000003611	ZC3H13	68	89.055	Tursiops_truncatus
ENSECAG00000022843	ZC3H13	54	88.316	ENSUMAG00000016220	ZC3H13	50	96.765	Ursus_maritimus
ENSECAG00000022843	ZC3H13	84	90.909	ENSVPAG00000005179	ZC3H13	80	95.527	Vicugna_pacos
ENSECAG00000022843	ZC3H13	54	91.858	ENSVVUG00000028395	ZC3H13	54	90.160	Vulpes_vulpes
ENSECAG00000022843	ZC3H13	86	77.395	ENSXETG00000014637	zc3h13	76	86.667	Xenopus_tropicalis