EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000023044 (Gene tree)
Gene ID: 100063192
Gene Symbol: DDX50
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 30906 bases
Position: chr1:57614855-57645760
Accession: 17099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000020644	GUCT	PF08152.12	1.3e-27	1	1
ENSECAP00000020644	ResIII	PF04851.15	4.5e-10	1	1
ENSECAP00000020644	DEAD	PF00270.29	2.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000024827	-	2217	-	ENSECAP00000020644	738 (aa)	XP_001503679	F6VBJ1

Gene Model

Click here to download ENSECAG00000023044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000023044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000023044	DDX50	55	33.412	ENSECAG00000020963	DDX27	52	33.175
ENSECAG00000023044	DDX50	99	56.478	ENSECAG00000010810	DDX21	92	58.921
ENSECAG00000023044	DDX50	50	32.888	ENSECAG00000015925	EIF4A3	86	32.888
ENSECAG00000023044	DDX50	50	32.533	ENSECAG00000021478	EIF4A1	87	31.989
ENSECAG00000023044	DDX50	50	31.989	ENSECAG00000021223	EIF4A2	88	31.536
ENSECAG00000023044	DDX50	55	30.843	ENSECAG00000023622	DDX47	80	31.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000023044	DDX50	99	97.693	ENSG00000107625	DDX50	100	97.693	Homo_sapiens
ENSECAG00000023044	DDX50	99	97.425	ENSAMEG00000017992	DDX50	100	97.425	Ailuropoda_melanoleuca
ENSECAG00000023044	DDX50	92	77.713	ENSANAG00000017785	-	92	77.842	Aotus_nancymaae
ENSECAG00000023044	DDX50	99	97.286	ENSBTAG00000033413	DDX50	100	97.286	Bos_taurus
ENSECAG00000023044	DDX50	99	97.829	ENSCJAG00000018844	DDX50	100	97.829	Callithrix_jacchus
ENSECAG00000023044	DDX50	99	97.967	ENSCAFG00000013776	DDX50	100	97.967	Canis_familiaris
ENSECAG00000023044	DDX50	100	97.970	ENSCAFG00020025977	DDX50	100	97.970	Canis_lupus_dingo
ENSECAG00000023044	DDX50	100	96.883	ENSCHIG00000000285	DDX50	100	96.883	Capra_hircus
ENSECAG00000023044	DDX50	99	97.151	ENSTSYG00000004192	DDX50	100	97.151	Carlito_syrichta
ENSECAG00000023044	DDX50	88	78.483	ENSCAPG00000007230	-	88	78.440	Cavia_aperea
ENSECAG00000023044	DDX50	91	95.697	ENSCPOG00000002131	-	93	95.601	Cavia_porcellus
ENSECAG00000023044	DDX50	91	87.647	ENSCCAG00000030543	DDX50	100	87.647	Cebus_capucinus
ENSECAG00000023044	DDX50	99	95.380	ENSCATG00000032463	DDX50	99	95.380	Cercocebus_atys
ENSECAG00000023044	DDX50	97	72.161	ENSCATG00000035153	-	90	89.474	Cercocebus_atys
ENSECAG00000023044	DDX50	99	66.351	ENSCATG00000039259	-	90	67.591	Cercocebus_atys
ENSECAG00000023044	DDX50	99	97.015	ENSCLAG00000012957	-	100	97.015	Chinchilla_lanigera
ENSECAG00000023044	DDX50	50	86.721	ENSCLAG00000001553	-	80	87.898	Chinchilla_lanigera
ENSECAG00000023044	DDX50	96	70.646	ENSCLAG00000001938	-	91	71.385	Chinchilla_lanigera
ENSECAG00000023044	DDX50	99	97.829	ENSCSAG00000007703	DDX50	100	97.829	Chlorocebus_sabaeus
ENSECAG00000023044	DDX50	88	94.761	ENSCHOG00000000233	DDX50	98	94.793	Choloepus_hoffmanni
ENSECAG00000023044	DDX50	86	72.082	ENSCANG00000018820	-	89	72.884	Colobus_angolensis_palliatus
ENSECAG00000023044	DDX50	99	83.853	ENSCANG00000036450	-	100	83.853	Colobus_angolensis_palliatus
ENSECAG00000023044	DDX50	96	68.951	ENSCANG00000028077	-	92	68.559	Colobus_angolensis_palliatus
ENSECAG00000023044	DDX50	92	94.985	ENSCGRG00001020223	Ddx50	93	94.868	Cricetulus_griseus_chok1gshd
ENSECAG00000023044	DDX50	91	95.111	ENSCGRG00000015884	Ddx50	93	94.860	Cricetulus_griseus_crigri
ENSECAG00000023044	DDX50	87	89.660	ENSDNOG00000001675	DDX50	100	89.660	Dasypus_novemcinctus
ENSECAG00000023044	DDX50	99	96.472	ENSDORG00000007310	Ddx50	100	96.472	Dipodomys_ordii
ENSECAG00000023044	DDX50	90	97.566	ENSETEG00000014069	DDX50	90	97.566	Echinops_telfairi
ENSECAG00000023044	DDX50	100	99.864	ENSEASG00005015595	DDX50	100	99.864	Equus_asinus_asinus
ENSECAG00000023044	DDX50	89	96.552	ENSEEUG00000005782	DDX50	81	98.246	Erinaceus_europaeus
ENSECAG00000023044	DDX50	100	98.241	ENSFCAG00000012678	DDX50	100	98.241	Felis_catus
ENSECAG00000023044	DDX50	92	89.233	ENSFDAG00000016109	-	92	89.296	Fukomys_damarensis
ENSECAG00000023044	DDX50	99	97.693	ENSGGOG00000010100	DDX50	100	97.693	Gorilla_gorilla
ENSECAG00000023044	DDX50	52	71.094	ENSGGOG00000022568	-	92	78.723	Gorilla_gorilla
ENSECAG00000023044	DDX50	51	81.746	ENSGGOG00000041063	-	83	84.520	Gorilla_gorilla
ENSECAG00000023044	DDX50	92	95.280	ENSHGLG00000013466	DDX50	93	95.308	Heterocephalus_glaber_female
ENSECAG00000023044	DDX50	92	95.280	ENSHGLG00100017191	DDX50	93	95.308	Heterocephalus_glaber_male
ENSECAG00000023044	DDX50	82	87.234	ENSHGLG00100006568	-	93	87.500	Heterocephalus_glaber_male
ENSECAG00000023044	DDX50	99	94.986	ENSSTOG00000021852	-	100	94.715	Ictidomys_tridecemlineatus
ENSECAG00000023044	DDX50	99	73.279	ENSJJAG00000019626	-	91	73.985	Jaculus_jaculus
ENSECAG00000023044	DDX50	99	94.301	ENSJJAG00000023928	-	93	94.282	Jaculus_jaculus
ENSECAG00000023044	DDX50	99	96.608	ENSLAFG00000006186	DDX50	100	96.608	Loxodonta_africana
ENSECAG00000023044	DDX50	97	71.607	ENSMFAG00000045339	-	90	88.545	Macaca_fascicularis
ENSECAG00000023044	DDX50	99	97.829	ENSMFAG00000044067	DDX50	100	97.829	Macaca_fascicularis
ENSECAG00000023044	DDX50	88	67.388	ENSMMUG00000045343	-	81	68.350	Macaca_mulatta
ENSECAG00000023044	DDX50	99	97.829	ENSMMUG00000001006	DDX50	100	98.363	Macaca_mulatta
ENSECAG00000023044	DDX50	92	90.855	ENSMNEG00000031664	DDX50	92	90.909	Macaca_nemestrina
ENSECAG00000023044	DDX50	97	72.828	ENSMNEG00000045530	-	92	88.182	Macaca_nemestrina
ENSECAG00000023044	DDX50	86	84.112	ENSMLEG00000041988	-	90	87.468	Mandrillus_leucophaeus
ENSECAG00000023044	DDX50	99	95.929	ENSMLEG00000037313	DDX50	100	95.929	Mandrillus_leucophaeus
ENSECAG00000023044	DDX50	56	92.978	ENSMAUG00000022192	Ddx50	100	92.978	Mesocricetus_auratus
ENSECAG00000023044	DDX50	99	89.552	ENSMICG00000017539	DDX50	100	89.552	Microcebus_murinus
ENSECAG00000023044	DDX50	92	94.412	ENSMOCG00000001676	Ddx50	93	94.298	Microtus_ochrogaster
ENSECAG00000023044	DDX50	92	80.352	ENSMODG00000010741	DDX50	92	80.349	Monodelphis_domestica
ENSECAG00000023044	DDX50	92	93.363	MGP_CAROLIEiJ_G0015389	Ddx50	93	94.282	Mus_caroli
ENSECAG00000023044	DDX50	92	94.100	ENSMUSG00000020076	Ddx50	93	94.575	Mus_musculus
ENSECAG00000023044	DDX50	92	94.248	MGP_PahariEiJ_G0030805	Ddx50	93	94.721	Mus_pahari
ENSECAG00000023044	DDX50	92	94.100	MGP_SPRETEiJ_G0016200	Ddx50	93	94.575	Mus_spretus
ENSECAG00000023044	DDX50	88	97.535	ENSMPUG00000004589	DDX50	100	97.535	Mustela_putorius_furo
ENSECAG00000023044	DDX50	92	95.723	ENSMLUG00000017590	DDX50	92	95.601	Myotis_lucifugus
ENSECAG00000023044	DDX50	99	95.794	ENSNGAG00000004283	Ddx50	100	95.794	Nannospalax_galili
ENSECAG00000023044	DDX50	99	97.693	ENSNLEG00000011631	DDX50	100	97.693	Nomascus_leucogenys
ENSECAG00000023044	DDX50	88	67.481	ENSNLEG00000035506	-	89	78.154	Nomascus_leucogenys
ENSECAG00000023044	DDX50	92	93.805	ENSOPRG00000001619	DDX50	93	94.428	Ochotona_princeps
ENSECAG00000023044	DDX50	92	95.575	ENSODEG00000014597	-	93	95.894	Octodon_degus
ENSECAG00000023044	DDX50	93	67.192	ENSOANG00000004776	DDX50	76	71.096	Ornithorhynchus_anatinus
ENSECAG00000023044	DDX50	94	94.261	ENSOCUG00000002879	DDX50	95	95.735	Oryctolagus_cuniculus
ENSECAG00000023044	DDX50	99	97.151	ENSOGAG00000001844	DDX50	100	97.151	Otolemur_garnettii
ENSECAG00000023044	DDX50	100	97.154	ENSOARG00000005264	DDX50	100	97.154	Ovis_aries
ENSECAG00000023044	DDX50	51	71.053	ENSPPAG00000026788	-	91	78.769	Pan_paniscus
ENSECAG00000023044	DDX50	99	97.558	ENSPPAG00000040723	DDX50	100	97.558	Pan_paniscus
ENSECAG00000023044	DDX50	99	98.238	ENSPPRG00000015826	DDX50	100	98.238	Panthera_pardus
ENSECAG00000023044	DDX50	99	98.238	ENSPTIG00000008454	DDX50	100	98.238	Panthera_tigris_altaica
ENSECAG00000023044	DDX50	51	71.053	ENSPTRG00000044913	-	99	72.105	Pan_troglodytes
ENSECAG00000023044	DDX50	99	97.558	ENSPTRG00000002562	DDX50	100	97.558	Pan_troglodytes
ENSECAG00000023044	DDX50	92	89.971	ENSPANG00000022143	-	92	90.029	Papio_anubis
ENSECAG00000023044	DDX50	92	94.100	ENSPEMG00000020899	-	93	93.988	Peromyscus_maniculatus_bairdii
ENSECAG00000023044	DDX50	91	80.000	ENSPCIG00000016036	DDX50	95	79.883	Phascolarctos_cinereus
ENSECAG00000023044	DDX50	91	98.214	ENSPPYG00000002390	DDX50	100	98.214	Pongo_abelii
ENSECAG00000023044	DDX50	83	82.630	ENSPCAG00000009692	DDX50	100	82.630	Procavia_capensis
ENSECAG00000023044	DDX50	79	87.692	ENSPCOG00000012574	DDX50	90	86.667	Propithecus_coquereli
ENSECAG00000023044	DDX50	86	95.868	ENSPVAG00000009519	DDX50	78	95.868	Pteropus_vampyrus
ENSECAG00000023044	DDX50	92	93.510	ENSRNOG00000000396	Ddx50	98	97.594	Rattus_norvegicus
ENSECAG00000023044	DDX50	99	66.982	ENSRBIG00000039673	-	90	66.423	Rhinopithecus_bieti
ENSECAG00000023044	DDX50	99	67.940	ENSRBIG00000036573	-	92	67.994	Rhinopithecus_bieti
ENSECAG00000023044	DDX50	87	96.112	ENSRBIG00000042841	-	98	97.766	Rhinopithecus_bieti
ENSECAG00000023044	DDX50	99	65.353	ENSRROG00000022853	-	92	64.905	Rhinopithecus_roxellana
ENSECAG00000023044	DDX50	99	97.558	ENSRROG00000032158	DDX50	100	97.920	Rhinopithecus_roxellana
ENSECAG00000023044	DDX50	52	70.235	ENSRROG00000031940	-	88	75.076	Rhinopithecus_roxellana
ENSECAG00000023044	DDX50	99	86.974	ENSSBOG00000014441	DDX50	100	86.974	Saimiri_boliviensis_boliviensis
ENSECAG00000023044	DDX50	75	71.171	ENSSHAG00000005334	-	88	63.636	Sarcophilus_harrisii
ENSECAG00000023044	DDX50	88	81.155	ENSSHAG00000005690	DDX50	92	81.146	Sarcophilus_harrisii
ENSECAG00000023044	DDX50	99	80.326	ENSSARG00000013553	DDX50	88	88.062	Sorex_araneus
ENSECAG00000023044	DDX50	100	96.477	ENSSSCG00000010246	DDX50	100	96.477	Sus_scrofa
ENSECAG00000023044	DDX50	96	74.543	ENSTBEG00000001085	DDX50	92	74.340	Tupaia_belangeri
ENSECAG00000023044	DDX50	99	91.316	ENSTTRG00000012408	DDX50	99	91.316	Tursiops_truncatus
ENSECAG00000023044	DDX50	99	97.696	ENSUAMG00000010976	DDX50	100	97.696	Ursus_americanus
ENSECAG00000023044	DDX50	100	97.700	ENSUMAG00000007726	DDX50	100	97.700	Ursus_maritimus
ENSECAG00000023044	DDX50	99	97.286	ENSVPAG00000000626	DDX50	100	97.286	Vicugna_pacos
ENSECAG00000023044	DDX50	82	92.371	ENSVVUG00000020366	DDX50	98	98.663	Vulpes_vulpes