EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000023338 (Gene tree)
Gene ID: 100060162
Gene Symbol: CSTF3
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 53869 bases
Position: chr12:614778-668646
Accession: 16922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000020796	Suf	PF05843.14	3.9e-84	1	1
ENSECAP00000037520	Suf	PF05843.14	6.1e-83	1	1
ENSECAP00000031269	Suf	PF05843.14	1.5e-75	1	1
ENSECAP00000044780	Suf	PF05843.14	2.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000064057	-	1401	-	ENSECAP00000044780	466 (aa)	-	-
ENSECAT00000055880	-	2154	-	ENSECAP00000037520	717 (aa)	-	-
ENSECAT00000025010	-	2103	-	ENSECAP00000020796	700 (aa)	-	F6TIH5
ENSECAT00000032793	-	2097	-	ENSECAP00000031269	698 (aa)	-	-

Gene Model

Click here to download ENSECAG00000023338's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000023338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000023338	CSTF3	100	99.857	ENSG00000176102	CSTF3	99	100.000	Homo_sapiens
ENSECAG00000023338	CSTF3	96	96.659	ENSAPOG00000014054	cstf3	99	90.819	Acanthochromis_polyacanthus
ENSECAG00000023338	CSTF3	100	99.714	ENSAMEG00000007187	CSTF3	97	99.714	Ailuropoda_melanoleuca
ENSECAG00000023338	CSTF3	89	86.080	ENSACIG00000005539	cstf3	100	86.080	Amphilophus_citrinellus
ENSECAG00000023338	CSTF3	96	96.659	ENSAOCG00000010930	cstf3	99	90.254	Amphiprion_ocellaris
ENSECAG00000023338	CSTF3	96	96.659	ENSAPEG00000007903	cstf3	99	90.537	Amphiprion_percula
ENSECAG00000023338	CSTF3	96	96.882	ENSATEG00000000190	cstf3	99	90.537	Anabas_testudineus
ENSECAG00000023338	CSTF3	100	98.143	ENSAPLG00000007217	CSTF3	99	98.143	Anas_platyrhynchos
ENSECAG00000023338	CSTF3	100	96.429	ENSACAG00000002823	CSTF3	99	95.063	Anolis_carolinensis
ENSECAG00000023338	CSTF3	100	99.857	ENSANAG00000020699	CSTF3	100	99.840	Aotus_nancymaae
ENSECAG00000023338	CSTF3	96	97.105	ENSACLG00000007820	cstf3	99	90.395	Astatotilapia_calliptera
ENSECAG00000023338	CSTF3	97	94.702	ENSAMXG00000014198	cstf3	99	91.854	Astyanax_mexicanus
ENSECAG00000023338	CSTF3	100	99.857	ENSBTAG00000008617	CSTF3	100	99.852	Bos_taurus
ENSECAG00000023338	CSTF3	95	55.102	WBGene00006307	suf-1	99	49.313	Caenorhabditis_elegans
ENSECAG00000023338	CSTF3	100	99.857	ENSCJAG00000005533	CSTF3	100	99.840	Callithrix_jacchus
ENSECAG00000023338	CSTF3	100	99.857	ENSCAFG00000007264	CSTF3	98	99.857	Canis_familiaris
ENSECAG00000023338	CSTF3	100	99.857	ENSCAFG00020002715	CSTF3	99	98.449	Canis_lupus_dingo
ENSECAG00000023338	CSTF3	100	98.286	ENSCHIG00000016418	CSTF3	100	99.840	Capra_hircus
ENSECAG00000023338	CSTF3	100	99.429	ENSTSYG00000000451	CSTF3	100	99.360	Carlito_syrichta
ENSECAG00000023338	CSTF3	85	96.591	ENSCAPG00000010958	CSTF3	98	96.591	Cavia_aperea
ENSECAG00000023338	CSTF3	100	99.571	ENSCPOG00000005545	CSTF3	98	99.571	Cavia_porcellus
ENSECAG00000023338	CSTF3	100	99.857	ENSCCAG00000024790	CSTF3	100	99.840	Cebus_capucinus
ENSECAG00000023338	CSTF3	100	99.857	ENSCATG00000007080	CSTF3	100	99.840	Cercocebus_atys
ENSECAG00000023338	CSTF3	100	99.857	ENSCLAG00000016179	CSTF3	98	99.857	Chinchilla_lanigera
ENSECAG00000023338	CSTF3	79	100.000	ENSCHOG00000002497	CSTF3	79	99.659	Choloepus_hoffmanni
ENSECAG00000023338	CSTF3	100	98.000	ENSCPBG00000006753	CSTF3	99	96.615	Chrysemys_picta_bellii
ENSECAG00000023338	CSTF3	96	70.089	ENSCING00000006401	-	98	61.259	Ciona_intestinalis
ENSECAG00000023338	CSTF3	96	69.575	ENSCSAVG00000004851	-	100	60.948	Ciona_savignyi
ENSECAG00000023338	CSTF3	100	99.857	ENSCANG00000035468	CSTF3	100	99.840	Colobus_angolensis_palliatus
ENSECAG00000023338	CSTF3	100	99.714	ENSCGRG00001014773	Cstf3	98	99.714	Cricetulus_griseus_chok1gshd
ENSECAG00000023338	CSTF3	100	99.714	ENSCGRG00000004142	Cstf3	98	99.714	Cricetulus_griseus_crigri
ENSECAG00000023338	CSTF3	97	96.889	ENSCSEG00000014283	cstf3	98	91.714	Cynoglossus_semilaevis
ENSECAG00000023338	CSTF3	96	95.546	ENSCVAG00000019739	cstf3	99	89.407	Cyprinodon_variegatus
ENSECAG00000023338	CSTF3	97	97.124	ENSDARG00000018904	cstf3	98	91.714	Danio_rerio
ENSECAG00000023338	CSTF3	100	99.429	ENSDNOG00000007366	CSTF3	98	99.429	Dasypus_novemcinctus
ENSECAG00000023338	CSTF3	100	91.869	ENSDORG00000005898	Cstf3	99	92.243	Dipodomys_ordii
ENSECAG00000023338	CSTF3	96	63.758	FBgn0003559	su(f)	98	56.612	Drosophila_melanogaster
ENSECAG00000023338	CSTF3	92	94.393	ENSETEG00000017097	CSTF3	90	94.393	Echinops_telfairi
ENSECAG00000023338	CSTF3	93	76.905	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSECAG00000023338	CSTF3	100	100.000	ENSEASG00005019884	CSTF3	100	100.000	Equus_asinus_asinus
ENSECAG00000023338	CSTF3	100	94.000	ENSEEUG00000015167	CSTF3	98	94.000	Erinaceus_europaeus
ENSECAG00000023338	CSTF3	97	95.556	ENSELUG00000023393	cstf3	98	90.429	Esox_lucius
ENSECAG00000023338	CSTF3	100	99.714	ENSFCAG00000030711	CSTF3	98	99.714	Felis_catus
ENSECAG00000023338	CSTF3	98	98.472	ENSFALG00000010764	CSTF3	100	97.081	Ficedula_albicollis
ENSECAG00000023338	CSTF3	100	99.714	ENSFDAG00000012082	CSTF3	98	99.714	Fukomys_damarensis
ENSECAG00000023338	CSTF3	96	95.768	ENSFHEG00000020623	cstf3	99	89.548	Fundulus_heteroclitus
ENSECAG00000023338	CSTF3	96	95.768	ENSGMOG00000012275	cstf3	99	88.575	Gadus_morhua
ENSECAG00000023338	CSTF3	100	98.286	ENSGALG00000011685	CSTF3	99	96.897	Gallus_gallus
ENSECAG00000023338	CSTF3	96	96.214	ENSGAFG00000002181	cstf3	99	89.831	Gambusia_affinis
ENSECAG00000023338	CSTF3	96	96.214	ENSGACG00000015997	cstf3	99	89.831	Gasterosteus_aculeatus
ENSECAG00000023338	CSTF3	100	98.000	ENSGAGG00000006200	CSTF3	99	96.615	Gopherus_agassizii
ENSECAG00000023338	CSTF3	100	93.857	ENSGGOG00000026591	CSTF3	99	93.557	Gorilla_gorilla
ENSECAG00000023338	CSTF3	96	97.105	ENSHBUG00000016656	cstf3	99	90.395	Haplochromis_burtoni
ENSECAG00000023338	CSTF3	100	99.571	ENSHGLG00000017834	CSTF3	98	99.571	Heterocephalus_glaber_female
ENSECAG00000023338	CSTF3	100	99.571	ENSHGLG00100018042	CSTF3	98	99.571	Heterocephalus_glaber_male
ENSECAG00000023338	CSTF3	96	93.960	ENSHCOG00000015218	cstf3	99	89.831	Hippocampus_comes
ENSECAG00000023338	CSTF3	97	96.256	ENSIPUG00000013170	CSTF3	98	91.000	Ictalurus_punctatus
ENSECAG00000023338	CSTF3	100	99.857	ENSSTOG00000013306	CSTF3	98	99.857	Ictidomys_tridecemlineatus
ENSECAG00000023338	CSTF3	97	99.778	ENSJJAG00000018430	Cstf3	97	87.857	Jaculus_jaculus
ENSECAG00000023338	CSTF3	96	96.214	ENSKMAG00000010916	cstf3	99	89.407	Kryptolebias_marmoratus
ENSECAG00000023338	CSTF3	97	96.018	ENSLBEG00000002306	cstf3	98	90.857	Labrus_bergylta
ENSECAG00000023338	CSTF3	97	98.444	ENSLACG00000017296	CSTF3	98	94.286	Latimeria_chalumnae
ENSECAG00000023338	CSTF3	97	97.333	ENSLOCG00000004415	cstf3	98	93.714	Lepisosteus_oculatus
ENSECAG00000023338	CSTF3	100	99.571	ENSLAFG00000008712	CSTF3	98	99.571	Loxodonta_africana
ENSECAG00000023338	CSTF3	100	99.857	ENSMFAG00000029516	CSTF3	100	99.840	Macaca_fascicularis
ENSECAG00000023338	CSTF3	100	99.857	ENSMMUG00000002542	CSTF3	98	99.857	Macaca_mulatta
ENSECAG00000023338	CSTF3	100	99.857	ENSMNEG00000021807	CSTF3	100	99.840	Macaca_nemestrina
ENSECAG00000023338	CSTF3	100	99.857	ENSMLEG00000039594	CSTF3	100	99.840	Mandrillus_leucophaeus
ENSECAG00000023338	CSTF3	96	96.437	ENSMAMG00000020423	cstf3	99	90.113	Mastacembelus_armatus
ENSECAG00000023338	CSTF3	96	97.105	ENSMZEG00005012082	cstf3	99	90.395	Maylandia_zebra
ENSECAG00000023338	CSTF3	100	98.286	ENSMGAG00000001383	CSTF3	99	96.897	Meleagris_gallopavo
ENSECAG00000023338	CSTF3	100	99.571	ENSMAUG00000002487	Cstf3	98	99.571	Mesocricetus_auratus
ENSECAG00000023338	CSTF3	100	99.571	ENSMICG00000004784	CSTF3	100	99.520	Microcebus_murinus
ENSECAG00000023338	CSTF3	100	99.714	ENSMOCG00000017583	Cstf3	98	99.714	Microtus_ochrogaster
ENSECAG00000023338	CSTF3	96	96.659	ENSMMOG00000016026	cstf3	93	91.429	Mola_mola
ENSECAG00000023338	CSTF3	96	89.509	ENSMODG00000025205	-	99	83.593	Monodelphis_domestica
ENSECAG00000023338	CSTF3	100	98.714	ENSMODG00000009745	-	98	98.714	Monodelphis_domestica
ENSECAG00000023338	CSTF3	96	96.659	ENSMALG00000012050	cstf3	99	90.395	Monopterus_albus
ENSECAG00000023338	CSTF3	100	99.714	MGP_CAROLIEiJ_G0024026	Cstf3	98	99.714	Mus_caroli
ENSECAG00000023338	CSTF3	100	99.714	ENSMUSG00000027176	Cstf3	98	99.714	Mus_musculus
ENSECAG00000023338	CSTF3	100	99.714	MGP_PahariEiJ_G0025464	Cstf3	98	99.714	Mus_pahari
ENSECAG00000023338	CSTF3	100	99.714	MGP_SPRETEiJ_G0024939	Cstf3	98	99.714	Mus_spretus
ENSECAG00000023338	CSTF3	100	99.714	ENSMPUG00000011457	CSTF3	98	99.714	Mustela_putorius_furo
ENSECAG00000023338	CSTF3	100	99.571	ENSMLUG00000003073	-	98	99.571	Myotis_lucifugus
ENSECAG00000023338	CSTF3	100	96.429	ENSMLUG00000026022	-	98	96.429	Myotis_lucifugus
ENSECAG00000023338	CSTF3	100	99.714	ENSNGAG00000010677	Cstf3	98	99.714	Nannospalax_galili
ENSECAG00000023338	CSTF3	89	91.040	ENSNBRG00000007345	cstf3	100	91.040	Neolamprologus_brichardi
ENSECAG00000023338	CSTF3	100	99.857	ENSNLEG00000017901	CSTF3	100	99.840	Nomascus_leucogenys
ENSECAG00000023338	CSTF3	82	99.478	ENSMEUG00000005640	-	100	94.837	Notamacropus_eugenii
ENSECAG00000023338	CSTF3	71	100.000	ENSOPRG00000000199	-	66	100.000	Ochotona_princeps
ENSECAG00000023338	CSTF3	100	99.714	ENSODEG00000016737	-	98	99.714	Octodon_degus
ENSECAG00000023338	CSTF3	91	87.107	ENSODEG00000006311	-	97	87.107	Octodon_degus
ENSECAG00000023338	CSTF3	96	97.105	ENSONIG00000005563	cstf3	99	90.395	Oreochromis_niloticus
ENSECAG00000023338	CSTF3	93	97.231	ENSOANG00000015140	CSTF3	100	97.231	Ornithorhynchus_anatinus
ENSECAG00000023338	CSTF3	100	99.571	ENSOCUG00000015417	CSTF3	98	99.571	Oryctolagus_cuniculus
ENSECAG00000023338	CSTF3	97	95.333	ENSORLG00000009762	cstf3	98	91.429	Oryzias_latipes
ENSECAG00000023338	CSTF3	97	95.333	ENSORLG00020005540	cstf3	98	91.429	Oryzias_latipes_hni
ENSECAG00000023338	CSTF3	97	95.333	ENSORLG00015003551	cstf3	98	91.286	Oryzias_latipes_hsok
ENSECAG00000023338	CSTF3	96	95.759	ENSOMEG00000003848	cstf3	98	90.857	Oryzias_melastigma
ENSECAG00000023338	CSTF3	100	99.289	ENSOGAG00000010229	CSTF3	98	99.289	Otolemur_garnettii
ENSECAG00000023338	CSTF3	92	99.689	ENSOARG00000017271	CSTF3	99	99.689	Ovis_aries
ENSECAG00000023338	CSTF3	100	96.143	ENSPPAG00000027358	CSTF3	99	95.798	Pan_paniscus
ENSECAG00000023338	CSTF3	100	99.714	ENSPPRG00000016852	CSTF3	98	99.714	Panthera_pardus
ENSECAG00000023338	CSTF3	100	99.714	ENSPTIG00000008716	CSTF3	98	99.714	Panthera_tigris_altaica
ENSECAG00000023338	CSTF3	100	99.857	ENSPTRG00000003485	CSTF3	98	99.857	Pan_troglodytes
ENSECAG00000023338	CSTF3	100	99.857	ENSPANG00000013722	CSTF3	98	99.857	Papio_anubis
ENSECAG00000023338	CSTF3	97	96.667	ENSPKIG00000023648	cstf3	98	93.143	Paramormyrops_kingsleyae
ENSECAG00000023338	CSTF3	100	97.571	ENSPSIG00000009173	CSTF3	99	96.192	Pelodiscus_sinensis
ENSECAG00000023338	CSTF3	97	96.222	ENSPMGG00000000164	cstf3	97	95.849	Periophthalmus_magnuspinnatus
ENSECAG00000023338	CSTF3	100	99.571	ENSPEMG00000011481	Cstf3	98	99.571	Peromyscus_maniculatus_bairdii
ENSECAG00000023338	CSTF3	96	86.918	ENSPMAG00000007282	cstf3	99	79.044	Petromyzon_marinus
ENSECAG00000023338	CSTF3	97	99.778	ENSPCIG00000026406	-	100	98.080	Phascolarctos_cinereus
ENSECAG00000023338	CSTF3	97	86.000	ENSPCIG00000030419	-	89	81.127	Phascolarctos_cinereus
ENSECAG00000023338	CSTF3	96	96.214	ENSPFOG00000017239	cstf3	99	89.972	Poecilia_formosa
ENSECAG00000023338	CSTF3	96	96.214	ENSPLAG00000009456	cstf3	99	90.254	Poecilia_latipinna
ENSECAG00000023338	CSTF3	96	96.214	ENSPMEG00000010320	cstf3	99	90.254	Poecilia_mexicana
ENSECAG00000023338	CSTF3	96	96.214	ENSPREG00000013549	cstf3	99	89.972	Poecilia_reticulata
ENSECAG00000023338	CSTF3	100	99.857	ENSPPYG00000003375	CSTF3	98	99.857	Pongo_abelii
ENSECAG00000023338	CSTF3	80	99.620	ENSPCAG00000008025	-	70	99.652	Procavia_capensis
ENSECAG00000023338	CSTF3	100	94.286	ENSPCOG00000014417	CSTF3	99	94.358	Propithecus_coquereli
ENSECAG00000023338	CSTF3	97	97.333	ENSPVAG00000002350	CSTF3	99	94.358	Pteropus_vampyrus
ENSECAG00000023338	CSTF3	96	97.105	ENSPNYG00000018259	cstf3	99	90.395	Pundamilia_nyererei
ENSECAG00000023338	CSTF3	97	97.566	ENSPNAG00000020182	cstf3	98	92.714	Pygocentrus_nattereri
ENSECAG00000023338	CSTF3	89	99.360	ENSRNOG00000012089	Cstf3	100	99.360	Rattus_norvegicus
ENSECAG00000023338	CSTF3	100	98.429	ENSRBIG00000044258	CSTF3	100	99.840	Rhinopithecus_bieti
ENSECAG00000023338	CSTF3	100	99.857	ENSRROG00000043450	CSTF3	100	99.840	Rhinopithecus_roxellana
ENSECAG00000023338	CSTF3	100	99.857	ENSSBOG00000024764	CSTF3	100	99.840	Saimiri_boliviensis_boliviensis
ENSECAG00000023338	CSTF3	100	98.571	ENSSHAG00000018128	-	98	98.571	Sarcophilus_harrisii
ENSECAG00000023338	CSTF3	96	90.200	ENSSHAG00000003135	-	98	85.431	Sarcophilus_harrisii
ENSECAG00000023338	CSTF3	97	97.111	ENSSFOG00015022133	cstf3	98	93.000	Scleropages_formosus
ENSECAG00000023338	CSTF3	96	95.991	ENSSMAG00000002197	cstf3	94	94.608	Scophthalmus_maximus
ENSECAG00000023338	CSTF3	96	96.659	ENSSDUG00000020426	cstf3	99	90.395	Seriola_dumerili
ENSECAG00000023338	CSTF3	96	96.659	ENSSLDG00000025649	cstf3	100	90.620	Seriola_lalandi_dorsalis
ENSECAG00000023338	CSTF3	100	99.429	ENSSARG00000000391	CSTF3	98	99.429	Sorex_araneus
ENSECAG00000023338	CSTF3	99	97.250	ENSSPUG00000010546	CSTF3	100	97.250	Sphenodon_punctatus
ENSECAG00000023338	CSTF3	96	96.659	ENSSPAG00000004958	cstf3	99	90.395	Stegastes_partitus
ENSECAG00000023338	CSTF3	100	99.714	ENSSSCG00000040954	CSTF3	98	99.714	Sus_scrofa
ENSECAG00000023338	CSTF3	100	98.000	ENSTGUG00000005010	CSTF3	99	98.000	Taeniopygia_guttata
ENSECAG00000023338	CSTF3	96	95.546	ENSTRUG00000004959	cstf3	100	88.649	Takifugu_rubripes
ENSECAG00000023338	CSTF3	96	95.768	ENSTNIG00000013811	cstf3	97	91.143	Tetraodon_nigroviridis
ENSECAG00000023338	CSTF3	92	96.262	ENSTBEG00000001544	CSTF3	90	96.262	Tupaia_belangeri
ENSECAG00000023338	CSTF3	100	96.714	ENSTTRG00000016366	CSTF3	98	96.714	Tursiops_truncatus
ENSECAG00000023338	CSTF3	100	99.571	ENSUMAG00000018971	CSTF3	100	99.520	Ursus_maritimus
ENSECAG00000023338	CSTF3	100	99.714	ENSVPAG00000007800	CSTF3	98	99.714	Vicugna_pacos
ENSECAG00000023338	CSTF3	100	99.857	ENSVVUG00000014938	CSTF3	100	99.840	Vulpes_vulpes
ENSECAG00000023338	CSTF3	90	79.375	ENSXETG00000021399	cstf3	100	80.744	Xenopus_tropicalis
ENSECAG00000023338	CSTF3	97	40.781	ENSXETG00000017946	-	99	43.093	Xenopus_tropicalis
ENSECAG00000023338	CSTF3	89	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSECAG00000023338	CSTF3	96	96.214	ENSXMAG00000009545	cstf3	99	89.972	Xiphophorus_maculatus