EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000023524 (Gene tree)
Gene ID: 100062345
Gene Symbol: DKC1
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 11324 bases
Position: chrX:127254817-127266140
Accession: 17201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000033002	TruB_N	PF01509.18	3.4e-21	1	1
ENSECAP00000021150	TruB_N	PF01509.18	4e-20	1	1
ENSECAP00000021150	PUA	PF01472.20	5.4e-18	1	1
ENSECAP00000033002	PUA	PF01472.20	6.9e-18	1	1
ENSECAP00000021150	DKCLD	PF08068.12	2e-31	1	1
ENSECAP00000033002	DKCLD	PF08068.12	2.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000037180	-	1897	-	ENSECAP00000033002	552 (aa)	-	-
ENSECAT00000025423	-	1801	-	ENSECAP00000021150	520 (aa)	XP_005614728	F7C3C0

Gene Model

Click here to download ENSECAG00000023524's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000023524's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000023524	DKC1	100	91.221	ENSG00000130826	DKC1	99	98.091	Homo_sapiens
ENSECAG00000023524	DKC1	86	79.556	ENSAPOG00000007799	dkc1	87	80.405	Acanthochromis_polyacanthus
ENSECAG00000023524	DKC1	90	94.647	ENSAMEG00000002776	DKC1	100	92.692	Ailuropoda_melanoleuca
ENSECAG00000023524	DKC1	78	85.608	ENSACIG00000022614	dkc1	92	78.842	Amphilophus_citrinellus
ENSECAG00000023524	DKC1	77	85.786	ENSAOCG00000013159	dkc1	90	79.186	Amphiprion_ocellaris
ENSECAG00000023524	DKC1	86	79.111	ENSAPEG00000002284	dkc1	89	80.227	Amphiprion_percula
ENSECAG00000023524	DKC1	78	83.942	ENSATEG00000013682	dkc1	88	78.714	Anabas_testudineus
ENSECAG00000023524	DKC1	87	82.789	ENSACAG00000015600	DKC1	77	82.789	Anolis_carolinensis
ENSECAG00000023524	DKC1	96	91.018	ENSANAG00000022732	DKC1	100	90.267	Aotus_nancymaae
ENSECAG00000023524	DKC1	76	86.111	ENSACLG00000015605	dkc1	93	76.890	Astatotilapia_calliptera
ENSECAG00000023524	DKC1	87	77.802	ENSAMXG00000017108	dkc1	88	78.761	Astyanax_mexicanus
ENSECAG00000023524	DKC1	100	90.769	ENSBTAG00000013045	DKC1	100	90.962	Bos_taurus
ENSECAG00000023524	DKC1	78	66.749	WBGene00010478	K01G5.5	98	63.229	Caenorhabditis_elegans
ENSECAG00000023524	DKC1	100	90.476	ENSCJAG00000004210	DKC1	100	91.048	Callithrix_jacchus
ENSECAG00000023524	DKC1	100	93.269	ENSCAFG00000019620	-	100	93.269	Canis_familiaris
ENSECAG00000023524	DKC1	97	81.275	ENSCAFG00000009311	-	96	81.076	Canis_familiaris
ENSECAG00000023524	DKC1	97	80.279	ENSCAFG00020009379	-	92	80.080	Canis_lupus_dingo
ENSECAG00000023524	DKC1	100	93.269	ENSCAFG00020008918	-	100	93.269	Canis_lupus_dingo
ENSECAG00000023524	DKC1	100	90.000	ENSCHIG00000017392	DKC1	100	91.346	Capra_hircus
ENSECAG00000023524	DKC1	99	90.979	ENSTSYG00000007681	DKC1	99	91.555	Carlito_syrichta
ENSECAG00000023524	DKC1	85	90.045	ENSCAPG00000003342	DKC1	99	89.485	Cavia_aperea
ENSECAG00000023524	DKC1	100	89.675	ENSCPOG00000008825	DKC1	100	89.675	Cavia_porcellus
ENSECAG00000023524	DKC1	100	82.443	ENSCCAG00000027418	DKC1	100	82.634	Cebus_capucinus
ENSECAG00000023524	DKC1	100	90.840	ENSCATG00000033602	DKC1	100	91.412	Cercocebus_atys
ENSECAG00000023524	DKC1	95	90.505	ENSCLAG00000000720	DKC1	96	90.744	Chinchilla_lanigera
ENSECAG00000023524	DKC1	100	91.031	ENSCSAG00000006706	DKC1	100	91.603	Chlorocebus_sabaeus
ENSECAG00000023524	DKC1	93	81.443	ENSCPBG00000005858	DKC1	95	85.619	Chrysemys_picta_bellii
ENSECAG00000023524	DKC1	85	72.135	ENSCING00000004599	-	86	73.034	Ciona_intestinalis
ENSECAG00000023524	DKC1	79	75.604	ENSCSAVG00000010047	-	88	77.722	Ciona_savignyi
ENSECAG00000023524	DKC1	100	91.031	ENSCANG00000027987	DKC1	100	91.603	Colobus_angolensis_palliatus
ENSECAG00000023524	DKC1	100	88.719	ENSCGRG00001014574	-	100	88.719	Cricetulus_griseus_chok1gshd
ENSECAG00000023524	DKC1	96	65.200	ENSCGRG00001016789	-	94	66.247	Cricetulus_griseus_chok1gshd
ENSECAG00000023524	DKC1	100	88.719	ENSCGRG00000016075	-	100	88.719	Cricetulus_griseus_crigri
ENSECAG00000023524	DKC1	98	64.579	ENSCGRG00000014809	-	93	65.904	Cricetulus_griseus_crigri
ENSECAG00000023524	DKC1	93	75.676	ENSCSEG00000012633	dkc1	95	76.421	Cynoglossus_semilaevis
ENSECAG00000023524	DKC1	76	86.041	ENSCVAG00000010155	dkc1	91	76.660	Cyprinodon_variegatus
ENSECAG00000023524	DKC1	77	85.965	ENSDARG00000016484	dkc1	88	78.492	Danio_rerio
ENSECAG00000023524	DKC1	100	89.866	ENSDNOG00000004218	DKC1	100	90.057	Dasypus_novemcinctus
ENSECAG00000023524	DKC1	58	83.667	ENSDORG00000013566	-	100	83.667	Dipodomys_ordii
ENSECAG00000023524	DKC1	77	73.684	FBgn0259937	Nop60B	89	67.980	Drosophila_melanogaster
ENSECAG00000023524	DKC1	91	85.474	ENSETEG00000016095	DKC1	95	85.474	Echinops_telfairi
ENSECAG00000023524	DKC1	65	78.107	ENSEBUG00000015962	dkc1	99	82.253	Eptatretus_burgeri
ENSECAG00000023524	DKC1	100	100.000	ENSEASG00005007484	DKC1	100	100.000	Equus_asinus_asinus
ENSECAG00000023524	DKC1	84	88.761	ENSEEUG00000003323	DKC1	100	88.991	Erinaceus_europaeus
ENSECAG00000023524	DKC1	81	83.412	ENSELUG00000014538	dkc1	89	79.775	Esox_lucius
ENSECAG00000023524	DKC1	100	92.308	ENSFCAG00000006577	DKC1	100	93.077	Felis_catus
ENSECAG00000023524	DKC1	86	81.319	ENSFALG00000011496	DKC1	85	81.838	Ficedula_albicollis
ENSECAG00000023524	DKC1	96	89.400	ENSFDAG00000002516	DKC1	100	88.781	Fukomys_damarensis
ENSECAG00000023524	DKC1	86	78.049	ENSFHEG00000004627	dkc1	89	76.160	Fundulus_heteroclitus
ENSECAG00000023524	DKC1	75	83.120	ENSGMOG00000017277	dkc1	100	83.120	Gadus_morhua
ENSECAG00000023524	DKC1	85	85.360	ENSGALG00000005054	DKC1	84	84.922	Gallus_gallus
ENSECAG00000023524	DKC1	86	78.300	ENSGAFG00000011486	dkc1	73	78.300	Gambusia_affinis
ENSECAG00000023524	DKC1	76	86.869	ENSGACG00000004373	dkc1	96	89.058	Gasterosteus_aculeatus
ENSECAG00000023524	DKC1	93	81.856	ENSGAGG00000011330	DKC1	88	84.322	Gopherus_agassizii
ENSECAG00000023524	DKC1	100	91.221	ENSGGOG00000001045	DKC1	100	91.794	Gorilla_gorilla
ENSECAG00000023524	DKC1	77	85.323	ENSHBUG00000012436	dkc1	95	75.949	Haplochromis_burtoni
ENSECAG00000023524	DKC1	97	89.216	ENSHGLG00000000649	DKC1	100	88.615	Heterocephalus_glaber_female
ENSECAG00000023524	DKC1	96	89.087	ENSHGLG00100001153	DKC1	100	88.484	Heterocephalus_glaber_male
ENSECAG00000023524	DKC1	93	74.694	ENSHCOG00000021099	dkc1	93	75.356	Hippocampus_comes
ENSECAG00000023524	DKC1	90	76.759	ENSIPUG00000010309	dkc1	91	76.050	Ictalurus_punctatus
ENSECAG00000023524	DKC1	91	92.647	ENSSTOG00000001074	-	96	92.647	Ictidomys_tridecemlineatus
ENSECAG00000023524	DKC1	97	80.868	ENSSTOG00000011904	-	93	81.065	Ictidomys_tridecemlineatus
ENSECAG00000023524	DKC1	100	81.644	ENSSTOG00000020149	-	100	81.453	Ictidomys_tridecemlineatus
ENSECAG00000023524	DKC1	58	84.333	ENSJJAG00000010086	-	100	84.333	Jaculus_jaculus
ENSECAG00000023524	DKC1	87	76.770	ENSKMAG00000008010	dkc1	89	78.281	Kryptolebias_marmoratus
ENSECAG00000023524	DKC1	86	78.619	ENSLBEG00000019122	dkc1	95	77.516	Labrus_bergylta
ENSECAG00000023524	DKC1	88	80.525	ENSLACG00000014025	DKC1	91	88.693	Latimeria_chalumnae
ENSECAG00000023524	DKC1	78	86.600	ENSLOCG00000013713	dkc1	99	76.681	Lepisosteus_oculatus
ENSECAG00000023524	DKC1	97	88.955	ENSLAFG00000000221	DKC1	97	89.152	Loxodonta_africana
ENSECAG00000023524	DKC1	100	91.031	ENSMFAG00000032398	DKC1	86	91.603	Macaca_fascicularis
ENSECAG00000023524	DKC1	100	91.031	ENSMMUG00000005768	DKC1	100	91.603	Macaca_mulatta
ENSECAG00000023524	DKC1	100	91.031	ENSMNEG00000034503	DKC1	100	91.603	Macaca_nemestrina
ENSECAG00000023524	DKC1	100	91.031	ENSMLEG00000034422	DKC1	100	91.603	Mandrillus_leucophaeus
ENSECAG00000023524	DKC1	78	84.804	ENSMAMG00000005427	dkc1	90	86.035	Mastacembelus_armatus
ENSECAG00000023524	DKC1	77	85.572	ENSMZEG00005014503	dkc1	95	76.160	Maylandia_zebra
ENSECAG00000023524	DKC1	78	85.012	ENSMGAG00000009238	DKC1	87	83.816	Meleagris_gallopavo
ENSECAG00000023524	DKC1	58	84.000	ENSMAUG00000016454	-	100	84.000	Mesocricetus_auratus
ENSECAG00000023524	DKC1	100	91.379	ENSMICG00000038751	-	100	91.571	Microcebus_murinus
ENSECAG00000023524	DKC1	86	81.473	ENSMICG00000002818	-	99	83.516	Microcebus_murinus
ENSECAG00000023524	DKC1	58	81.000	ENSMOCG00000001169	-	100	81.000	Microtus_ochrogaster
ENSECAG00000023524	DKC1	76	86.111	ENSMMOG00000020348	dkc1	87	85.678	Mola_mola
ENSECAG00000023524	DKC1	83	88.811	ENSMODG00000009243	DKC1	75	88.811	Monodelphis_domestica
ENSECAG00000023524	DKC1	86	79.018	ENSMALG00000009454	dkc1	90	78.728	Monopterus_albus
ENSECAG00000023524	DKC1	100	78.220	MGP_CAROLIEiJ_G0033191	Dkc1	100	93.243	Mus_caroli
ENSECAG00000023524	DKC1	100	87.692	ENSMUSG00000031403	Dkc1	100	88.462	Mus_musculus
ENSECAG00000023524	DKC1	99	87.861	MGP_PahariEiJ_G0031735	Dkc1	100	87.861	Mus_pahari
ENSECAG00000023524	DKC1	100	87.692	MGP_SPRETEiJ_G0034351	Dkc1	100	88.077	Mus_spretus
ENSECAG00000023524	DKC1	97	93.254	ENSMPUG00000016136	DKC1	93	93.254	Mustela_putorius_furo
ENSECAG00000023524	DKC1	90	87.393	ENSMLUG00000011918	DKC1	100	84.091	Myotis_lucifugus
ENSECAG00000023524	DKC1	58	84.333	ENSNGAG00000015724	-	100	84.333	Nannospalax_galili
ENSECAG00000023524	DKC1	76	86.616	ENSNBRG00000005638	dkc1	80	86.616	Neolamprologus_brichardi
ENSECAG00000023524	DKC1	100	91.031	ENSNLEG00000014323	DKC1	100	91.603	Nomascus_leucogenys
ENSECAG00000023524	DKC1	79	86.165	ENSMEUG00000001066	DKC1	96	81.390	Notamacropus_eugenii
ENSECAG00000023524	DKC1	87	89.891	ENSOPRG00000005248	DKC1	90	89.891	Ochotona_princeps
ENSECAG00000023524	DKC1	58	85.333	ENSODEG00000000549	-	100	85.333	Octodon_degus
ENSECAG00000023524	DKC1	84	94.495	ENSODEG00000011816	-	91	90.275	Octodon_degus
ENSECAG00000023524	DKC1	87	80.132	ENSONIG00000013889	dkc1	94	77.263	Oreochromis_niloticus
ENSECAG00000023524	DKC1	66	62.953	ENSOANG00000022295	-	95	62.178	Ornithorhynchus_anatinus
ENSECAG00000023524	DKC1	90	84.760	ENSOANG00000008713	-	96	84.551	Ornithorhynchus_anatinus
ENSECAG00000023524	DKC1	97	91.071	ENSOCUG00000012646	DKC1	96	91.071	Oryctolagus_cuniculus
ENSECAG00000023524	DKC1	75	86.189	ENSORLG00000018748	dkc1	89	76.600	Oryzias_latipes
ENSECAG00000023524	DKC1	79	83.738	ENSOMEG00000005786	dkc1	82	85.774	Oryzias_melastigma
ENSECAG00000023524	DKC1	97	92.292	ENSOGAG00000003399	DKC1	97	92.292	Otolemur_garnettii
ENSECAG00000023524	DKC1	100	89.038	ENSOARG00000003047	DKC1	100	90.385	Ovis_aries
ENSECAG00000023524	DKC1	100	91.031	ENSPPAG00000023820	DKC1	100	91.603	Pan_paniscus
ENSECAG00000023524	DKC1	90	94.658	ENSPPRG00000009104	DKC1	100	92.885	Panthera_pardus
ENSECAG00000023524	DKC1	89	92.009	ENSPTIG00000017469	DKC1	99	89.709	Panthera_tigris_altaica
ENSECAG00000023524	DKC1	100	91.221	ENSPTRG00000022449	DKC1	100	91.794	Pan_troglodytes
ENSECAG00000023524	DKC1	97	92.110	ENSPTRG00000043416	-	84	92.308	Pan_troglodytes
ENSECAG00000023524	DKC1	100	91.031	ENSPANG00000011978	DKC1	100	91.603	Papio_anubis
ENSECAG00000023524	DKC1	76	87.563	ENSPKIG00000008443	dkc1	98	77.586	Paramormyrops_kingsleyae
ENSECAG00000023524	DKC1	71	90.591	ENSPSIG00000013765	DKC1	86	93.557	Pelodiscus_sinensis
ENSECAG00000023524	DKC1	76	82.576	ENSPMGG00000004097	dkc1	73	82.576	Periophthalmus_magnuspinnatus
ENSECAG00000023524	DKC1	97	56.126	ENSPEMG00000013348	Dkc1	100	96.410	Peromyscus_maniculatus_bairdii
ENSECAG00000023524	DKC1	88	86.057	ENSPCIG00000016706	DKC1	76	85.806	Phascolarctos_cinereus
ENSECAG00000023524	DKC1	86	78.571	ENSPFOG00000018653	dkc1	85	78.571	Poecilia_formosa
ENSECAG00000023524	DKC1	86	78.571	ENSPLAG00000003272	dkc1	77	78.571	Poecilia_latipinna
ENSECAG00000023524	DKC1	86	78.571	ENSPMEG00000010413	dkc1	85	78.571	Poecilia_mexicana
ENSECAG00000023524	DKC1	86	78.795	ENSPREG00000004100	dkc1	84	78.571	Poecilia_reticulata
ENSECAG00000023524	DKC1	99	91.137	ENSPPYG00000020892	DKC1	100	91.715	Pongo_abelii
ENSECAG00000023524	DKC1	72	94.118	ENSPCAG00000015034	DKC1	73	94.118	Procavia_capensis
ENSECAG00000023524	DKC1	100	91.603	ENSPCOG00000026874	DKC1	100	91.794	Propithecus_coquereli
ENSECAG00000023524	DKC1	99	90.559	ENSPVAG00000009222	DKC1	99	90.559	Pteropus_vampyrus
ENSECAG00000023524	DKC1	86	78.808	ENSPNYG00000020063	dkc1	88	78.808	Pundamilia_nyererei
ENSECAG00000023524	DKC1	84	82.569	ENSPNAG00000005780	dkc1	92	77.440	Pygocentrus_nattereri
ENSECAG00000023524	DKC1	96	80.517	ENSRNOG00000055562	Dkc1	97	80.517	Rattus_norvegicus
ENSECAG00000023524	DKC1	100	91.031	ENSRBIG00000028457	DKC1	86	91.603	Rhinopithecus_bieti
ENSECAG00000023524	DKC1	100	91.031	ENSRROG00000044780	DKC1	100	91.603	Rhinopithecus_roxellana
ENSECAG00000023524	DKC1	71	70.153	YLR175W	-	98	60.788	Saccharomyces_cerevisiae
ENSECAG00000023524	DKC1	100	90.857	ENSSBOG00000033746	DKC1	100	91.238	Saimiri_boliviensis_boliviensis
ENSECAG00000023524	DKC1	95	82.996	ENSSHAG00000002463	DKC1	97	84.713	Sarcophilus_harrisii
ENSECAG00000023524	DKC1	84	82.989	ENSSFOG00015009585	dkc1	94	76.875	Scleropages_formosus
ENSECAG00000023524	DKC1	77	86.783	ENSSMAG00000002552	dkc1	88	80.455	Scophthalmus_maximus
ENSECAG00000023524	DKC1	90	78.158	ENSSDUG00000009963	dkc1	88	80.995	Seriola_dumerili
ENSECAG00000023524	DKC1	86	78.022	ENSSLDG00000019342	dkc1	96	78.696	Seriola_lalandi_dorsalis
ENSECAG00000023524	DKC1	95	82.828	ENSSARG00000001822	DKC1	96	83.299	Sorex_araneus
ENSECAG00000023524	DKC1	89	84.599	ENSSPUG00000018907	DKC1	86	83.660	Sphenodon_punctatus
ENSECAG00000023524	DKC1	78	85.112	ENSSPAG00000002585	dkc1	87	77.851	Stegastes_partitus
ENSECAG00000023524	DKC1	100	93.090	ENSSSCG00000012823	DKC1	100	93.090	Sus_scrofa
ENSECAG00000023524	DKC1	78	84.029	ENSTGUG00000006781	DKC1	100	79.310	Taeniopygia_guttata
ENSECAG00000023524	DKC1	78	84.804	ENSTRUG00000004413	dkc1	82	84.804	Takifugu_rubripes
ENSECAG00000023524	DKC1	77	68.796	ENSTNIG00000002582	dkc1	79	68.796	Tetraodon_nigroviridis
ENSECAG00000023524	DKC1	68	89.266	ENSTBEG00000011262	DKC1	100	88.679	Tupaia_belangeri
ENSECAG00000023524	DKC1	74	92.459	ENSTTRG00000008089	DKC1	76	92.459	Tursiops_truncatus
ENSECAG00000023524	DKC1	95	95.132	ENSUAMG00000022721	DKC1	95	96.231	Ursus_americanus
ENSECAG00000023524	DKC1	95	94.929	ENSUMAG00000016899	DKC1	99	92.383	Ursus_maritimus
ENSECAG00000023524	DKC1	97	74.008	ENSVVUG00000021671	-	91	74.206	Vulpes_vulpes
ENSECAG00000023524	DKC1	99	92.337	ENSVVUG00000020734	-	89	92.337	Vulpes_vulpes
ENSECAG00000023524	DKC1	93	77.366	ENSXETG00000032517	DKC1	88	82.287	Xenopus_tropicalis
ENSECAG00000023524	DKC1	86	78.125	ENSXCOG00000005498	dkc1	99	76.407	Xiphophorus_couchianus
ENSECAG00000023524	DKC1	86	78.348	ENSXMAG00000004919	dkc1	85	78.348	Xiphophorus_maculatus