EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000023723 (Gene tree)
Gene ID: 100051945
Gene Symbol: MTREX
Alias: SKIV2L2
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 116066 bases
Position: chr21:17538369-17654434
Accession: 23003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000046273	rRNA_proc-arch	PF13234.6	1.8e-87	1	1
ENSECAP00000030279	rRNA_proc-arch	PF13234.6	1.9e-87	1	1
ENSECAP00000021485	rRNA_proc-arch	PF13234.6	2e-87	1	1
ENSECAP00000027721	rRNA_proc-arch	PF13234.6	2.8e-67	1	2
ENSECAP00000027721	rRNA_proc-arch	PF13234.6	2.8e-67	2	2
ENSECAP00000043573	rRNA_proc-arch	PF13234.6	4.2e-59	1	1
ENSECAP00000036549	rRNA_proc-arch	PF13234.6	9.2e-46	1	1
ENSECAP00000036549	DEAD	PF00270.29	5.6e-17	1	1
ENSECAP00000043573	DEAD	PF00270.29	6e-17	1	1
ENSECAP00000046273	DEAD	PF00270.29	6.1e-17	1	1
ENSECAP00000027721	DEAD	PF00270.29	6.2e-17	1	1
ENSECAP00000030279	DEAD	PF00270.29	6.5e-17	1	1
ENSECAP00000021485	DEAD	PF00270.29	6.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000065294	-	3030	-	ENSECAP00000030279	1009 (aa)	-	-
ENSECAT00000064423	-	3187	-	ENSECAP00000046273	1005 (aa)	-	-
ENSECAT00000025806	-	3377	-	ENSECAP00000021485	1042 (aa)	XP_023481435	F6YYD8
ENSECAT00000041380	-	3047	-	ENSECAP00000036549	942 (aa)	-	-
ENSECAT00000031662	-	3188	-	ENSECAP00000043573	979 (aa)	-	-
ENSECAT00000038612	-	3266	-	ENSECAP00000027721	1005 (aa)	-	-

Gene Model

Click here to download ENSECAG00000023723's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000023723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000023723	MTREX	80	41.789	ENSECAG00000021823	SKIV2L	71	36.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000023723	MTREX	100	99.537	ENSG00000039123	MTREX	100	98.177	Homo_sapiens
ENSECAG00000023723	MTREX	100	89.302	ENSAPOG00000007814	mtrex	100	83.206	Acanthochromis_polyacanthus
ENSECAG00000023723	MTREX	100	99.537	ENSAMEG00000013856	MTREX	100	98.562	Ailuropoda_melanoleuca
ENSECAG00000023723	MTREX	90	89.767	ENSACIG00000015117	mtrex	96	87.971	Amphilophus_citrinellus
ENSECAG00000023723	MTREX	100	89.302	ENSAOCG00000011884	mtrex	100	83.302	Amphiprion_ocellaris
ENSECAG00000023723	MTREX	100	88.837	ENSAPEG00000019384	mtrex	100	83.206	Amphiprion_percula
ENSECAG00000023723	MTREX	100	89.767	ENSATEG00000015117	mtrex	100	83.763	Anabas_testudineus
ENSECAG00000023723	MTREX	95	97.222	ENSAPLG00000009694	MTREX	99	92.641	Anas_platyrhynchos
ENSECAG00000023723	MTREX	100	96.759	ENSACAG00000015200	MTREX	96	91.075	Anolis_carolinensis
ENSECAG00000023723	MTREX	100	99.537	ENSANAG00000023095	MTREX	100	98.273	Aotus_nancymaae
ENSECAG00000023723	MTREX	100	88.837	ENSACLG00000001921	mtrex	100	82.745	Astatotilapia_calliptera
ENSECAG00000023723	MTREX	95	88.415	ENSAMXG00000018751	mtrex	99	83.936	Astyanax_mexicanus
ENSECAG00000023723	MTREX	100	99.537	ENSBTAG00000010518	MTREX	100	98.273	Bos_taurus
ENSECAG00000023723	MTREX	87	58.564	WBGene00012342	mtr-4	98	52.028	Caenorhabditis_elegans
ENSECAG00000023723	MTREX	100	99.537	ENSCJAG00000001773	MTREX	100	97.233	Callithrix_jacchus
ENSECAG00000023723	MTREX	100	99.074	ENSCAFG00000006818	MTREX	100	98.656	Canis_familiaris
ENSECAG00000023723	MTREX	100	99.074	ENSCAFG00020024352	MTREX	100	98.656	Canis_lupus_dingo
ENSECAG00000023723	MTREX	100	99.537	ENSCHIG00000024413	MTREX	100	98.408	Capra_hircus
ENSECAG00000023723	MTREX	94	99.537	ENSTSYG00000007389	MTREX	100	97.666	Carlito_syrichta
ENSECAG00000023723	MTREX	92	96.296	ENSCAPG00000008696	MTREX	87	96.296	Cavia_aperea
ENSECAG00000023723	MTREX	100	99.537	ENSCPOG00000009797	MTREX	100	97.889	Cavia_porcellus
ENSECAG00000023723	MTREX	100	99.537	ENSCCAG00000014177	MTREX	100	98.273	Cebus_capucinus
ENSECAG00000023723	MTREX	100	99.537	ENSCATG00000042153	MTREX	100	97.985	Cercocebus_atys
ENSECAG00000023723	MTREX	100	99.074	ENSCLAG00000006622	MTREX	100	97.505	Chinchilla_lanigera
ENSECAG00000023723	MTREX	100	98.165	ENSCSAG00000016445	MTREX	100	93.493	Chlorocebus_sabaeus
ENSECAG00000023723	MTREX	72	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSECAG00000023723	MTREX	100	96.296	ENSCPBG00000026551	MTREX	94	92.522	Chrysemys_picta_bellii
ENSECAG00000023723	MTREX	99	71.759	ENSCING00000003239	-	94	71.759	Ciona_intestinalis
ENSECAG00000023723	MTREX	99	69.507	ENSCSAVG00000009304	-	100	70.000	Ciona_savignyi
ENSECAG00000023723	MTREX	100	99.537	ENSCANG00000035770	MTREX	100	97.889	Colobus_angolensis_palliatus
ENSECAG00000023723	MTREX	100	99.537	ENSCGRG00001024680	Mtrex	100	97.313	Cricetulus_griseus_chok1gshd
ENSECAG00000023723	MTREX	100	99.537	ENSCGRG00000000307	Mtrex	100	97.313	Cricetulus_griseus_crigri
ENSECAG00000023723	MTREX	100	87.907	ENSCSEG00000018621	mtrex	98	82.044	Cynoglossus_semilaevis
ENSECAG00000023723	MTREX	100	89.815	ENSCVAG00000004556	mtrex	100	83.333	Cyprinodon_variegatus
ENSECAG00000023723	MTREX	100	91.628	ENSDARG00000013457	mtrex	100	84.623	Danio_rerio
ENSECAG00000023723	MTREX	100	99.537	ENSDNOG00000015375	MTREX	100	96.750	Dasypus_novemcinctus
ENSECAG00000023723	MTREX	100	98.611	ENSDORG00000006782	Mtrex	100	97.601	Dipodomys_ordii
ENSECAG00000023723	MTREX	99	69.668	FBgn0001986	Mtr4	99	62.465	Drosophila_melanogaster
ENSECAG00000023723	MTREX	100	80.330	ENSETEG00000000727	MTREX	90	79.505	Echinops_telfairi
ENSECAG00000023723	MTREX	99	76.414	ENSEBUG00000012869	mtrex	99	74.640	Eptatretus_burgeri
ENSECAG00000023723	MTREX	100	100.000	ENSEASG00005013270	MTREX	100	99.904	Equus_asinus_asinus
ENSECAG00000023723	MTREX	98	98.492	ENSEEUG00000000527	MTREX	100	88.976	Erinaceus_europaeus
ENSECAG00000023723	MTREX	98	92.500	ENSELUG00000004898	mtrex	100	89.601	Esox_lucius
ENSECAG00000023723	MTREX	100	99.537	ENSFCAG00000010575	MTREX	100	98.464	Felis_catus
ENSECAG00000023723	MTREX	100	96.296	ENSFALG00000010850	MTREX	100	90.403	Ficedula_albicollis
ENSECAG00000023723	MTREX	100	99.537	ENSFDAG00000011199	MTREX	100	96.929	Fukomys_damarensis
ENSECAG00000023723	MTREX	100	89.815	ENSFHEG00000023014	mtrex	100	82.634	Fundulus_heteroclitus
ENSECAG00000023723	MTREX	100	89.767	ENSGMOG00000014702	mtrex	100	80.057	Gadus_morhua
ENSECAG00000023723	MTREX	100	95.833	ENSGALG00000014709	MTREX	86	91.292	Gallus_gallus
ENSECAG00000023723	MTREX	100	89.352	ENSGAFG00000012425	mtrex	98	87.397	Gambusia_affinis
ENSECAG00000023723	MTREX	100	86.977	ENSGACG00000016260	mtrex	96	85.326	Gasterosteus_aculeatus
ENSECAG00000023723	MTREX	100	96.296	ENSGAGG00000020036	MTREX	100	91.850	Gopherus_agassizii
ENSECAG00000023723	MTREX	100	99.537	ENSGGOG00000001867	MTREX	100	98.273	Gorilla_gorilla
ENSECAG00000023723	MTREX	100	88.837	ENSHBUG00000006229	mtrex	100	82.745	Haplochromis_burtoni
ENSECAG00000023723	MTREX	100	99.074	ENSHGLG00000019445	SKIV2L2	100	97.313	Heterocephalus_glaber_female
ENSECAG00000023723	MTREX	100	99.074	ENSHGLG00100011833	SKIV2L2	100	97.313	Heterocephalus_glaber_male
ENSECAG00000023723	MTREX	90	89.767	ENSHCOG00000019995	mtrex	100	84.725	Hippocampus_comes
ENSECAG00000023723	MTREX	100	91.628	ENSIPUG00000024348	skiv2l2	100	85.660	Ictalurus_punctatus
ENSECAG00000023723	MTREX	100	99.537	ENSSTOG00000010802	MTREX	100	98.177	Ictidomys_tridecemlineatus
ENSECAG00000023723	MTREX	100	90.934	ENSJJAG00000020975	Mtrex	100	90.499	Jaculus_jaculus
ENSECAG00000023723	MTREX	100	87.907	ENSKMAG00000012642	mtrex	100	82.808	Kryptolebias_marmoratus
ENSECAG00000023723	MTREX	100	89.302	ENSLBEG00000019367	mtrex	99	86.131	Labrus_bergylta
ENSECAG00000023723	MTREX	100	93.981	ENSLACG00000009075	MTREX	100	88.506	Latimeria_chalumnae
ENSECAG00000023723	MTREX	100	92.130	ENSLOCG00000010186	mtrex	100	86.973	Lepisosteus_oculatus
ENSECAG00000023723	MTREX	99	97.222	ENSLAFG00000010497	MTREX	100	95.585	Loxodonta_africana
ENSECAG00000023723	MTREX	100	99.537	ENSMFAG00000031610	MTREX	100	97.985	Macaca_fascicularis
ENSECAG00000023723	MTREX	100	99.537	ENSMMUG00000010379	MTREX	100	96.743	Macaca_mulatta
ENSECAG00000023723	MTREX	100	99.537	ENSMNEG00000032746	MTREX	100	97.985	Macaca_nemestrina
ENSECAG00000023723	MTREX	100	99.537	ENSMLEG00000041051	MTREX	100	97.985	Mandrillus_leucophaeus
ENSECAG00000023723	MTREX	100	89.767	ENSMAMG00000016753	mtrex	96	88.506	Mastacembelus_armatus
ENSECAG00000023723	MTREX	100	88.837	ENSMZEG00005000414	mtrex	100	82.745	Maylandia_zebra
ENSECAG00000023723	MTREX	91	75.112	ENSMGAG00000003980	MTREX	100	67.644	Meleagris_gallopavo
ENSECAG00000023723	MTREX	100	99.537	ENSMAUG00000010727	Mtrex	100	97.025	Mesocricetus_auratus
ENSECAG00000023723	MTREX	100	99.537	ENSMICG00000012779	MTREX	100	98.656	Microcebus_murinus
ENSECAG00000023723	MTREX	100	99.074	ENSMOCG00000019886	Mtrex	100	97.025	Microtus_ochrogaster
ENSECAG00000023723	MTREX	100	88.837	ENSMMOG00000002476	mtrex	100	81.870	Mola_mola
ENSECAG00000023723	MTREX	100	96.296	ENSMODG00000019494	MTREX	100	93.301	Monodelphis_domestica
ENSECAG00000023723	MTREX	100	88.837	ENSMALG00000002917	mtrex	99	82.497	Monopterus_albus
ENSECAG00000023723	MTREX	100	99.074	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.641	Mus_caroli
ENSECAG00000023723	MTREX	100	99.074	ENSMUSG00000016018	Mtrex	100	96.833	Mus_musculus
ENSECAG00000023723	MTREX	100	99.074	MGP_PahariEiJ_G0015967	Mtrex	100	96.641	Mus_pahari
ENSECAG00000023723	MTREX	100	99.074	MGP_SPRETEiJ_G0019775	Mtrex	100	96.833	Mus_spretus
ENSECAG00000023723	MTREX	100	99.537	ENSMPUG00000007619	MTREX	100	98.848	Mustela_putorius_furo
ENSECAG00000023723	MTREX	100	97.717	ENSMLUG00000001152	MTREX	100	96.651	Myotis_lucifugus
ENSECAG00000023723	MTREX	100	99.537	ENSNGAG00000011938	Mtrex	100	97.505	Nannospalax_galili
ENSECAG00000023723	MTREX	100	88.837	ENSNBRG00000011293	mtrex	100	82.841	Neolamprologus_brichardi
ENSECAG00000023723	MTREX	100	94.665	ENSNLEG00000001494	MTREX	100	94.061	Nomascus_leucogenys
ENSECAG00000023723	MTREX	86	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSECAG00000023723	MTREX	100	82.407	ENSOPRG00000008009	MTREX	100	82.246	Ochotona_princeps
ENSECAG00000023723	MTREX	100	99.074	ENSODEG00000017234	MTREX	100	96.833	Octodon_degus
ENSECAG00000023723	MTREX	100	88.837	ENSONIG00000007587	mtrex	100	82.555	Oreochromis_niloticus
ENSECAG00000023723	MTREX	100	99.537	ENSOCUG00000004463	MTREX	100	98.177	Oryctolagus_cuniculus
ENSECAG00000023723	MTREX	100	88.372	ENSORLG00000005443	mtrex	100	82.808	Oryzias_latipes
ENSECAG00000023723	MTREX	100	88.372	ENSORLG00020006329	mtrex	100	82.713	Oryzias_latipes_hni
ENSECAG00000023723	MTREX	100	88.372	ENSORLG00015012924	mtrex	100	82.808	Oryzias_latipes_hsok
ENSECAG00000023723	MTREX	100	86.977	ENSOMEG00000008825	mtrex	100	82.000	Oryzias_melastigma
ENSECAG00000023723	MTREX	100	99.074	ENSOGAG00000002886	MTREX	100	98.081	Otolemur_garnettii
ENSECAG00000023723	MTREX	100	98.174	ENSOARG00000007764	MTREX	100	98.086	Ovis_aries
ENSECAG00000023723	MTREX	100	99.537	ENSPPAG00000039291	MTREX	100	98.177	Pan_paniscus
ENSECAG00000023723	MTREX	100	99.537	ENSPPRG00000019701	MTREX	100	98.464	Panthera_pardus
ENSECAG00000023723	MTREX	100	99.537	ENSPTIG00000009313	MTREX	100	96.929	Panthera_tigris_altaica
ENSECAG00000023723	MTREX	100	99.537	ENSPTRG00000016878	MTREX	100	98.177	Pan_troglodytes
ENSECAG00000023723	MTREX	100	99.537	ENSPANG00000009697	MTREX	100	97.889	Papio_anubis
ENSECAG00000023723	MTREX	98	92.000	ENSPKIG00000020833	mtrex	99	87.792	Paramormyrops_kingsleyae
ENSECAG00000023723	MTREX	100	96.296	ENSPSIG00000012150	MTREX	100	92.330	Pelodiscus_sinensis
ENSECAG00000023723	MTREX	100	87.963	ENSPMGG00000002582	mtrex	100	81.125	Periophthalmus_magnuspinnatus
ENSECAG00000023723	MTREX	95	68.767	ENSPMAG00000009668	mtrex	100	65.663	Petromyzon_marinus
ENSECAG00000023723	MTREX	91	96.727	ENSPCIG00000024730	MTREX	100	96.727	Phascolarctos_cinereus
ENSECAG00000023723	MTREX	75	87.326	ENSPFOG00000003141	mtrex	100	87.563	Poecilia_formosa
ENSECAG00000023723	MTREX	100	88.889	ENSPLAG00000021311	mtrex	100	83.588	Poecilia_latipinna
ENSECAG00000023723	MTREX	90	88.889	ENSPMEG00000010597	mtrex	99	88.025	Poecilia_mexicana
ENSECAG00000023723	MTREX	100	88.426	ENSPREG00000003089	mtrex	100	83.302	Poecilia_reticulata
ENSECAG00000023723	MTREX	98	99.497	ENSPPYG00000015469	MTREX	98	98.244	Pongo_abelii
ENSECAG00000023723	MTREX	100	82.791	ENSPCAG00000013120	MTREX	94	82.791	Procavia_capensis
ENSECAG00000023723	MTREX	99	92.219	ENSPCOG00000018092	MTREX	100	92.114	Propithecus_coquereli
ENSECAG00000023723	MTREX	100	99.537	ENSPVAG00000002445	MTREX	100	98.752	Pteropus_vampyrus
ENSECAG00000023723	MTREX	100	88.837	ENSPNYG00000006164	mtrex	100	82.650	Pundamilia_nyererei
ENSECAG00000023723	MTREX	100	92.558	ENSPNAG00000008794	mtrex	100	85.960	Pygocentrus_nattereri
ENSECAG00000023723	MTREX	99	97.044	ENSRNOG00000010125	Mtrex	97	96.599	Rattus_norvegicus
ENSECAG00000023723	MTREX	100	99.537	ENSRBIG00000034930	MTREX	100	96.257	Rhinopithecus_bieti
ENSECAG00000023723	MTREX	100	99.537	ENSRROG00000039895	MTREX	100	97.985	Rhinopithecus_roxellana
ENSECAG00000023723	MTREX	88	62.158	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSECAG00000023723	MTREX	100	99.537	ENSSBOG00000026693	MTREX	100	98.081	Saimiri_boliviensis_boliviensis
ENSECAG00000023723	MTREX	96	95.486	ENSSHAG00000004600	MTREX	100	95.486	Sarcophilus_harrisii
ENSECAG00000023723	MTREX	100	94.907	ENSSFOG00015014355	skiv2l2	100	87.094	Scleropages_formosus
ENSECAG00000023723	MTREX	100	89.767	ENSSMAG00000007572	mtrex	100	82.841	Scophthalmus_maximus
ENSECAG00000023723	MTREX	100	89.767	ENSSDUG00000023789	mtrex	100	83.588	Seriola_dumerili
ENSECAG00000023723	MTREX	100	89.767	ENSSLDG00000006301	mtrex	100	83.492	Seriola_lalandi_dorsalis
ENSECAG00000023723	MTREX	100	99.074	ENSSARG00000008387	MTREX	100	94.434	Sorex_araneus
ENSECAG00000023723	MTREX	100	90.278	ENSSPUG00000007071	MTREX	90	90.278	Sphenodon_punctatus
ENSECAG00000023723	MTREX	90	89.767	ENSSPAG00000011319	mtrex	94	87.920	Stegastes_partitus
ENSECAG00000023723	MTREX	100	99.537	ENSSSCG00000016911	MTREX	100	98.848	Sus_scrofa
ENSECAG00000023723	MTREX	100	95.370	ENSTGUG00000002480	MTREX	100	90.316	Taeniopygia_guttata
ENSECAG00000023723	MTREX	100	87.907	ENSTRUG00000014571	mtrex	100	82.650	Takifugu_rubripes
ENSECAG00000023723	MTREX	100	82.870	ENSTBEG00000007769	MTREX	100	81.862	Tupaia_belangeri
ENSECAG00000023723	MTREX	100	99.074	ENSTTRG00000008678	MTREX	100	98.177	Tursiops_truncatus
ENSECAG00000023723	MTREX	100	99.537	ENSUAMG00000023061	MTREX	100	98.464	Ursus_americanus
ENSECAG00000023723	MTREX	100	99.537	ENSUMAG00000009373	MTREX	99	99.540	Ursus_maritimus
ENSECAG00000023723	MTREX	94	100.000	ENSVPAG00000011174	MTREX	89	100.000	Vicugna_pacos
ENSECAG00000023723	MTREX	100	99.074	ENSVVUG00000021337	MTREX	100	98.848	Vulpes_vulpes
ENSECAG00000023723	MTREX	100	93.056	ENSXETG00000032798	MTREX	100	88.782	Xenopus_tropicalis
ENSECAG00000023723	MTREX	100	89.352	ENSXMAG00000004799	mtrex	100	83.286	Xiphophorus_maculatus