EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000023811 (Gene tree)
Gene ID: 100050497
Gene Symbol: RBFOX3
Alias: -
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 330520 bases
Position: chr11:3354336-3684855
Accession: 22227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000021479	Fox-1_C	PF12414.8	2.1e-46	1	1
ENSECAP00000045301	Fox-1_C	PF12414.8	2.5e-46	1	1
ENSECAP00000021479	RRM_1	PF00076.22	1.3e-18	1	1
ENSECAP00000045301	RRM_1	PF00076.22	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000025799	-	978	-	ENSECAP00000021479	314 (aa)	-	F6YYV0
ENSECAT00000050587	-	1325	-	ENSECAP00000045301	346 (aa)	-	-

Gene Model

Click here to download ENSECAG00000023811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000023811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000023811	RBFOX3	100	70.554	ENSECAG00000012667	RBFOX1	77	68.902
ENSECAG00000023811	RBFOX3	96	61.988	ENSECAG00000018923	RBFOX2	74	60.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000023811	RBFOX3	100	97.452	ENSG00000167281	RBFOX3	100	97.452	Homo_sapiens
ENSECAG00000023811	RBFOX3	100	81.962	ENSAPOG00000021630	rbfox3b	81	79.801	Acanthochromis_polyacanthus
ENSECAG00000023811	RBFOX3	93	71.717	ENSAPOG00000015658	-	89	66.987	Acanthochromis_polyacanthus
ENSECAG00000023811	RBFOX3	100	92.470	ENSAMEG00000014170	RBFOX3	84	92.470	Ailuropoda_melanoleuca
ENSECAG00000023811	RBFOX3	100	77.532	ENSACIG00000010817	rbfox3b	94	74.917	Amphilophus_citrinellus
ENSECAG00000023811	RBFOX3	95	69.497	ENSACIG00000003768	-	71	73.256	Amphilophus_citrinellus
ENSECAG00000023811	RBFOX3	95	78.146	ENSAOCG00000010786	-	80	75.817	Amphiprion_ocellaris
ENSECAG00000023811	RBFOX3	100	81.962	ENSAOCG00000012358	rbfox3b	81	79.801	Amphiprion_ocellaris
ENSECAG00000023811	RBFOX3	100	72.468	ENSAPEG00000019081	rbfox3b	80	69.967	Amphiprion_percula
ENSECAG00000023811	RBFOX3	95	72.531	ENSAPEG00000015891	-	79	70.679	Amphiprion_percula
ENSECAG00000023811	RBFOX3	100	72.543	ENSATEG00000019945	rbfox3b	95	72.673	Anabas_testudineus
ENSECAG00000023811	RBFOX3	95	77.815	ENSATEG00000023101	-	92	75.578	Anabas_testudineus
ENSECAG00000023811	RBFOX3	100	89.241	ENSACAG00000016093	RBFOX3	83	88.372	Anolis_carolinensis
ENSECAG00000023811	RBFOX3	100	96.497	ENSANAG00000023457	RBFOX3	100	96.497	Aotus_nancymaae
ENSECAG00000023811	RBFOX3	100	80.757	ENSACLG00000025552	-	81	78.808	Astatotilapia_calliptera
ENSECAG00000023811	RBFOX3	100	81.962	ENSACLG00000020011	rbfox3b	95	79.139	Astatotilapia_calliptera
ENSECAG00000023811	RBFOX3	95	81.250	ENSAMXG00000037246	rbfox3a	90	81.250	Astyanax_mexicanus
ENSECAG00000023811	RBFOX3	100	76.341	ENSAMXG00000042841	rbfox3b	85	74.172	Astyanax_mexicanus
ENSECAG00000023811	RBFOX3	92	96.194	ENSBTAG00000006280	RBFOX3	78	96.194	Bos_taurus
ENSECAG00000023811	RBFOX3	100	92.038	ENSCJAG00000009563	RBFOX3	92	92.038	Callithrix_jacchus
ENSECAG00000023811	RBFOX3	76	98.750	ENSCAFG00000005547	RBFOX3	85	98.750	Canis_familiaris
ENSECAG00000023811	RBFOX3	100	85.319	ENSCAFG00020008126	RBFOX3	98	83.740	Canis_lupus_dingo
ENSECAG00000023811	RBFOX3	95	82.081	ENSCHIG00000009124	RBFOX3	92	81.214	Capra_hircus
ENSECAG00000023811	RBFOX3	100	85.319	ENSTSYG00000029617	RBFOX3	100	85.319	Carlito_syrichta
ENSECAG00000023811	RBFOX3	54	97.041	ENSCAPG00000010217	RBFOX3	100	97.041	Cavia_aperea
ENSECAG00000023811	RBFOX3	100	84.807	ENSCPOG00000021703	RBFOX3	100	84.807	Cavia_porcellus
ENSECAG00000023811	RBFOX3	100	96.497	ENSCCAG00000028450	RBFOX3	100	96.497	Cebus_capucinus
ENSECAG00000023811	RBFOX3	100	97.452	ENSCATG00000018349	RBFOX3	100	97.452	Cercocebus_atys
ENSECAG00000023811	RBFOX3	100	85.319	ENSCLAG00000006449	RBFOX3	100	85.319	Chinchilla_lanigera
ENSECAG00000023811	RBFOX3	100	97.771	ENSCSAG00000002355	RBFOX3	100	97.771	Chlorocebus_sabaeus
ENSECAG00000023811	RBFOX3	95	88.963	ENSCPBG00000010904	RBFOX3	95	88.294	Chrysemys_picta_bellii
ENSECAG00000023811	RBFOX3	100	97.771	ENSCANG00000043120	RBFOX3	100	97.771	Colobus_angolensis_palliatus
ENSECAG00000023811	RBFOX3	95	82.948	ENSCGRG00001019476	Rbfox3	96	82.948	Cricetulus_griseus_chok1gshd
ENSECAG00000023811	RBFOX3	95	82.948	ENSCGRG00000003268	Rbfox3	96	82.948	Cricetulus_griseus_crigri
ENSECAG00000023811	RBFOX3	100	78.864	ENSCSEG00000015567	RBFOX3	88	70.517	Cynoglossus_semilaevis
ENSECAG00000023811	RBFOX3	100	66.458	ENSCSEG00000020606	RBFOX3	83	67.361	Cynoglossus_semilaevis
ENSECAG00000023811	RBFOX3	100	81.962	ENSCVAG00000006882	rbfox3b	81	79.801	Cyprinodon_variegatus
ENSECAG00000023811	RBFOX3	100	71.975	ENSDARG00000074310	rbfox3b	97	72.368	Danio_rerio
ENSECAG00000023811	RBFOX3	95	80.263	ENSDARG00000010083	rbfox3a	94	79.032	Danio_rerio
ENSECAG00000023811	RBFOX3	89	70.213	ENSDNOG00000039391	RBFOX3	92	68.966	Dasypus_novemcinctus
ENSECAG00000023811	RBFOX3	95	70.725	ENSDORG00000005352	Rbfox3	95	68.116	Dipodomys_ordii
ENSECAG00000023811	RBFOX3	84	61.818	ENSEBUG00000013559	RBFOX3	71	63.672	Eptatretus_burgeri
ENSECAG00000023811	RBFOX3	100	70.732	ENSEBUG00000002129	RBFOX3	88	73.163	Eptatretus_burgeri
ENSECAG00000023811	RBFOX3	100	99.363	ENSEASG00005005059	RBFOX3	100	99.363	Equus_asinus_asinus
ENSECAG00000023811	RBFOX3	84	93.229	ENSEEUG00000013974	RBFOX3	68	93.548	Erinaceus_europaeus
ENSECAG00000023811	RBFOX3	100	81.073	ENSELUG00000017963	rbfox3b	95	68.874	Esox_lucius
ENSECAG00000023811	RBFOX3	51	68.235	ENSELUG00000009807	-	50	68.235	Esox_lucius
ENSECAG00000023811	RBFOX3	100	96.815	ENSFCAG00000002555	RBFOX3	100	96.815	Felis_catus
ENSECAG00000023811	RBFOX3	95	73.112	ENSFALG00000012288	RBFOX3	81	74.320	Ficedula_albicollis
ENSECAG00000023811	RBFOX3	100	80.110	ENSFDAG00000007489	RBFOX3	100	80.110	Fukomys_damarensis
ENSECAG00000023811	RBFOX3	100	72.468	ENSFHEG00000008550	rbfox3b	95	69.868	Fundulus_heteroclitus
ENSECAG00000023811	RBFOX3	100	62.466	ENSGMOG00000019304	-	95	66.038	Gadus_morhua
ENSECAG00000023811	RBFOX3	95	91.639	ENSGALG00000032889	RBFOX3	83	90.635	Gallus_gallus
ENSECAG00000023811	RBFOX3	98	80.259	ENSGAFG00000005025	rbfox3b	86	79.470	Gambusia_affinis
ENSECAG00000023811	RBFOX3	95	67.521	ENSGACG00000002138	-	92	66.097	Gasterosteus_aculeatus
ENSECAG00000023811	RBFOX3	95	88.963	ENSGAGG00000020025	RBFOX3	95	88.294	Gopherus_agassizii
ENSECAG00000023811	RBFOX3	100	97.452	ENSGGOG00000012546	RBFOX3	100	97.452	Gorilla_gorilla
ENSECAG00000023811	RBFOX3	100	80.442	ENSHBUG00000023098	-	86	78.808	Haplochromis_burtoni
ENSECAG00000023811	RBFOX3	100	81.962	ENSHBUG00000018099	rbfox3b	81	79.470	Haplochromis_burtoni
ENSECAG00000023811	RBFOX3	100	84.341	ENSHGLG00000008679	RBFOX3	100	84.341	Heterocephalus_glaber_female
ENSECAG00000023811	RBFOX3	95	79.656	ENSHGLG00100014739	RBFOX3	93	79.429	Heterocephalus_glaber_male
ENSECAG00000023811	RBFOX3	96	76.412	ENSHCOG00000007444	RBFOX3	77	76.744	Hippocampus_comes
ENSECAG00000023811	RBFOX3	100	70.662	ENSHCOG00000001863	RBFOX3	88	66.997	Hippocampus_comes
ENSECAG00000023811	RBFOX3	100	65.318	ENSIPUG00000021966	rbfox3b	88	75.949	Ictalurus_punctatus
ENSECAG00000023811	RBFOX3	95	79.934	ENSIPUG00000012010	rbfox3a	90	79.934	Ictalurus_punctatus
ENSECAG00000023811	RBFOX3	95	79.538	ENSSTOG00000026817	RBFOX3	95	76.568	Ictidomys_tridecemlineatus
ENSECAG00000023811	RBFOX3	95	83.237	ENSJJAG00000014167	Rbfox3	96	81.503	Jaculus_jaculus
ENSECAG00000023811	RBFOX3	100	81.962	ENSKMAG00000006726	rbfox3b	81	79.801	Kryptolebias_marmoratus
ENSECAG00000023811	RBFOX3	100	81.646	ENSLBEG00000004030	rbfox3b	94	74.587	Labrus_bergylta
ENSECAG00000023811	RBFOX3	95	83.113	ENSLBEG00000022508	-	81	80.464	Labrus_bergylta
ENSECAG00000023811	RBFOX3	95	76.147	ENSLACG00000018409	-	83	75.535	Latimeria_chalumnae
ENSECAG00000023811	RBFOX3	95	84.768	ENSLOCG00000012267	rbfox3a	90	84.768	Lepisosteus_oculatus
ENSECAG00000023811	RBFOX3	95	85.933	ENSLAFG00000016623	RBFOX3	92	81.159	Loxodonta_africana
ENSECAG00000023811	RBFOX3	100	84.488	ENSMFAG00000002247	RBFOX3	100	84.488	Macaca_fascicularis
ENSECAG00000023811	RBFOX3	100	97.452	ENSMMUG00000023028	RBFOX3	100	97.452	Macaca_mulatta
ENSECAG00000023811	RBFOX3	100	97.134	ENSMNEG00000041147	RBFOX3	100	97.134	Macaca_nemestrina
ENSECAG00000023811	RBFOX3	100	97.452	ENSMLEG00000025686	RBFOX3	100	97.452	Mandrillus_leucophaeus
ENSECAG00000023811	RBFOX3	100	77.389	ENSMAMG00000019810	rbfox3b	94	74.667	Mastacembelus_armatus
ENSECAG00000023811	RBFOX3	95	77.483	ENSMAMG00000020600	-	85	74.593	Mastacembelus_armatus
ENSECAG00000023811	RBFOX3	95	58.610	ENSMZEG00005003055	-	59	90.370	Maylandia_zebra
ENSECAG00000023811	RBFOX3	100	81.962	ENSMZEG00005000781	rbfox3b	81	79.470	Maylandia_zebra
ENSECAG00000023811	RBFOX3	61	91.146	ENSMGAG00000005600	RBFOX3	73	91.146	Meleagris_gallopavo
ENSECAG00000023811	RBFOX3	95	81.556	ENSMAUG00000013543	Rbfox3	96	79.251	Mesocricetus_auratus
ENSECAG00000023811	RBFOX3	100	95.860	ENSMICG00000014898	RBFOX3	100	95.860	Microcebus_murinus
ENSECAG00000023811	RBFOX3	95	82.370	ENSMOCG00000015373	Rbfox3	96	80.347	Microtus_ochrogaster
ENSECAG00000023811	RBFOX3	100	79.439	ENSMMOG00000020193	rbfox3b	81	78.947	Mola_mola
ENSECAG00000023811	RBFOX3	95	91.973	ENSMODG00000002089	RBFOX3	83	90.970	Monodelphis_domestica
ENSECAG00000023811	RBFOX3	100	82.650	ENSMALG00000018270	-	95	73.333	Monopterus_albus
ENSECAG00000023811	RBFOX3	100	81.013	ENSMALG00000020407	rbfox3b	81	78.808	Monopterus_albus
ENSECAG00000023811	RBFOX3	100	95.860	MGP_CAROLIEiJ_G0017487	Rbfox3	100	97.041	Mus_caroli
ENSECAG00000023811	RBFOX3	95	95.318	ENSMUSG00000025576	Rbfox3	96	94.245	Mus_musculus
ENSECAG00000023811	RBFOX3	100	96.815	MGP_PahariEiJ_G0018614	Rbfox3	100	97.041	Mus_pahari
ENSECAG00000023811	RBFOX3	100	96.178	MGP_SPRETEiJ_G0018331	Rbfox3	100	97.041	Mus_spretus
ENSECAG00000023811	RBFOX3	95	86.012	ENSMPUG00000012319	RBFOX3	87	85.119	Mustela_putorius_furo
ENSECAG00000023811	RBFOX3	95	83.526	ENSNGAG00000018006	Rbfox3	96	81.503	Nannospalax_galili
ENSECAG00000023811	RBFOX3	100	80.696	ENSNBRG00000010102	rbfox3b	81	79.139	Neolamprologus_brichardi
ENSECAG00000023811	RBFOX3	100	72.698	ENSNBRG00000022885	-	81	72.000	Neolamprologus_brichardi
ENSECAG00000023811	RBFOX3	100	68.354	ENSNLEG00000000153	-	99	68.323	Nomascus_leucogenys
ENSECAG00000023811	RBFOX3	95	58.382	ENSMEUG00000004218	-	75	96.552	Notamacropus_eugenii
ENSECAG00000023811	RBFOX3	76	97.191	ENSOPRG00000016279	-	68	97.191	Ochotona_princeps
ENSECAG00000023811	RBFOX3	100	98.089	ENSODEG00000009433	RBFOX3	100	98.089	Octodon_degus
ENSECAG00000023811	RBFOX3	100	81.388	ENSONIG00000007282	-	87	79.470	Oreochromis_niloticus
ENSECAG00000023811	RBFOX3	100	81.962	ENSONIG00000009549	rbfox3b	92	70.968	Oreochromis_niloticus
ENSECAG00000023811	RBFOX3	76	67.845	ENSOCUG00000014217	RBFOX3	78	67.138	Oryctolagus_cuniculus
ENSECAG00000023811	RBFOX3	100	82.019	ENSORLG00000000905	rbfox3b	65	79.538	Oryzias_latipes
ENSECAG00000023811	RBFOX3	100	82.019	ENSORLG00020018030	rbfox3b	81	79.801	Oryzias_latipes_hni
ENSECAG00000023811	RBFOX3	100	81.703	ENSORLG00015009200	rbfox3b	95	69.079	Oryzias_latipes_hsok
ENSECAG00000023811	RBFOX3	76	75.969	ENSOMEG00000014677	rbfox3b	76	67.213	Oryzias_melastigma
ENSECAG00000023811	RBFOX3	100	96.497	ENSOGAG00000029595	RBFOX3	84	96.497	Otolemur_garnettii
ENSECAG00000023811	RBFOX3	92	66.144	ENSOARG00000002908	RBFOX3	80	67.628	Ovis_aries
ENSECAG00000023811	RBFOX3	91	97.213	ENSPPAG00000025383	RBFOX3	99	97.213	Pan_paniscus
ENSECAG00000023811	RBFOX3	100	85.070	ENSPPRG00000007819	RBFOX3	100	85.070	Panthera_pardus
ENSECAG00000023811	RBFOX3	100	97.452	ENSPTRG00000009727	RBFOX3	100	97.452	Pan_troglodytes
ENSECAG00000023811	RBFOX3	100	97.452	ENSPANG00000019837	RBFOX3	100	97.452	Papio_anubis
ENSECAG00000023811	RBFOX3	95	85.099	ENSPKIG00000010299	rbfox3a	73	84.314	Paramormyrops_kingsleyae
ENSECAG00000023811	RBFOX3	100	67.610	ENSPKIG00000022633	-	83	64.286	Paramormyrops_kingsleyae
ENSECAG00000023811	RBFOX3	84	82.463	ENSPMGG00000008000	rbfox3b	77	81.818	Periophthalmus_magnuspinnatus
ENSECAG00000023811	RBFOX3	95	82.948	ENSPEMG00000010500	Rbfox3	96	80.925	Peromyscus_maniculatus_bairdii
ENSECAG00000023811	RBFOX3	56	75.789	ENSPMAG00000008689	rbfox3b	93	78.421	Petromyzon_marinus
ENSECAG00000023811	RBFOX3	95	82.609	ENSPCIG00000005766	RBFOX3	95	80.602	Phascolarctos_cinereus
ENSECAG00000023811	RBFOX3	100	81.962	ENSPFOG00000018294	rbfox3b	78	79.801	Poecilia_formosa
ENSECAG00000023811	RBFOX3	77	80.488	ENSPLAG00000000481	rbfox3b	75	77.642	Poecilia_latipinna
ENSECAG00000023811	RBFOX3	100	72.468	ENSPMEG00000022997	rbfox3b	95	69.868	Poecilia_mexicana
ENSECAG00000023811	RBFOX3	100	82.334	ENSPREG00000012886	rbfox3b	86	80.132	Poecilia_reticulata
ENSECAG00000023811	RBFOX3	91	90.941	ENSPPYG00000008704	RBFOX3	84	90.941	Pongo_abelii
ENSECAG00000023811	RBFOX3	95	80.290	ENSPCAG00000001401	RBFOX3	96	78.261	Procavia_capensis
ENSECAG00000023811	RBFOX3	100	83.934	ENSPCOG00000012689	RBFOX3	100	83.657	Propithecus_coquereli
ENSECAG00000023811	RBFOX3	95	76.812	ENSPVAG00000015243	RBFOX3	96	76.812	Pteropus_vampyrus
ENSECAG00000023811	RBFOX3	100	69.085	ENSPNYG00000010414	rbfox3b	79	68.317	Pundamilia_nyererei
ENSECAG00000023811	RBFOX3	100	73.418	ENSPNYG00000009079	-	78	71.803	Pundamilia_nyererei
ENSECAG00000023811	RBFOX3	100	64.557	ENSPNAG00000018173	rbfox3b	86	62.667	Pygocentrus_nattereri
ENSECAG00000023811	RBFOX3	95	80.921	ENSPNAG00000002889	rbfox3a	81	80.921	Pygocentrus_nattereri
ENSECAG00000023811	RBFOX3	100	96.815	ENSRNOG00000003386	Rbfox3	100	96.815	Rattus_norvegicus
ENSECAG00000023811	RBFOX3	100	97.771	ENSRBIG00000040449	RBFOX3	87	97.771	Rhinopithecus_bieti
ENSECAG00000023811	RBFOX3	100	97.771	ENSRROG00000000766	RBFOX3	100	97.771	Rhinopithecus_roxellana
ENSECAG00000023811	RBFOX3	100	96.497	ENSSBOG00000031591	RBFOX3	100	96.497	Saimiri_boliviensis_boliviensis
ENSECAG00000023811	RBFOX3	95	83.686	ENSSHAG00000016076	RBFOX3	95	80.602	Sarcophilus_harrisii
ENSECAG00000023811	RBFOX3	95	83.444	ENSSFOG00015023260	rbfox3a	81	83.444	Scleropages_formosus
ENSECAG00000023811	RBFOX3	96	68.212	ENSSFOG00015004716	RBFOX3	84	68.771	Scleropages_formosus
ENSECAG00000023811	RBFOX3	100	79.811	ENSSMAG00000019052	-	95	77.483	Scophthalmus_maximus
ENSECAG00000023811	RBFOX3	100	77.778	ENSSMAG00000012618	rbfox3b	71	76.101	Scophthalmus_maximus
ENSECAG00000023811	RBFOX3	95	75.251	ENSSDUG00000015801	-	83	75.082	Seriola_dumerili
ENSECAG00000023811	RBFOX3	100	72.468	ENSSDUG00000023183	rbfox3b	95	69.868	Seriola_dumerili
ENSECAG00000023811	RBFOX3	100	81.962	ENSSLDG00000000149	rbfox3b	81	79.801	Seriola_lalandi_dorsalis
ENSECAG00000023811	RBFOX3	95	78.146	ENSSLDG00000016098	-	83	75.570	Seriola_lalandi_dorsalis
ENSECAG00000023811	RBFOX3	95	90.033	ENSSPUG00000011733	RBFOX3	95	89.439	Sphenodon_punctatus
ENSECAG00000023811	RBFOX3	100	72.468	ENSSPAG00000017571	rbfox3b	79	69.637	Stegastes_partitus
ENSECAG00000023811	RBFOX3	90	72.378	ENSSPAG00000004898	-	75	75.294	Stegastes_partitus
ENSECAG00000023811	RBFOX3	86	97.778	ENSSSCG00000039498	RBFOX3	84	97.464	Sus_scrofa
ENSECAG00000023811	RBFOX3	100	77.532	ENSTRUG00000004894	rbfox3b	86	76.948	Takifugu_rubripes
ENSECAG00000023811	RBFOX3	100	73.352	ENSTNIG00000011278	rbfox3b	83	71.343	Tetraodon_nigroviridis
ENSECAG00000023811	RBFOX3	87	54.717	ENSTBEG00000004296	-	59	63.594	Tupaia_belangeri
ENSECAG00000023811	RBFOX3	95	76.879	ENSTTRG00000003676	RBFOX3	96	76.012	Tursiops_truncatus
ENSECAG00000023811	RBFOX3	100	97.771	ENSUAMG00000004668	RBFOX3	100	97.771	Ursus_americanus
ENSECAG00000023811	RBFOX3	100	98.089	ENSVVUG00000017864	RBFOX3	100	98.089	Vulpes_vulpes
ENSECAG00000023811	RBFOX3	100	66.962	ENSXETG00000020236	rbfox3	81	65.741	Xenopus_tropicalis
ENSECAG00000023811	RBFOX3	100	80.442	ENSXCOG00000018262	rbfox3b	95	73.754	Xiphophorus_couchianus
ENSECAG00000023811	RBFOX3	100	81.962	ENSXMAG00000012939	rbfox3b	81	79.801	Xiphophorus_maculatus