EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • Orthologs
Description
Ensembl ID
ENSECAG00000023886 (Gene tree)
Gene ID
100072427
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Plus strand
Length
62474 bases
Position
chr11:45786810-45849283
Accession
22508
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000021472tRNA_anti-codonPF01336.254.7e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000025791-1851-ENSECAP00000021472616 (aa)XP_023508987F6YZ24
Gene Model
Click here to download ENSECAG00000023886's gene model file
Pathways
Pathway IDPathway NameSource
ecb03030DNA replicationKEGG
ecb03420Nucleotide excision repairKEGG
ecb03430Mismatch repairKEGG
ecb03440Homologous recombinationKEGG
ecb03460Fanconi anemia pathwayKEGG
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000023886RPA19962.459ENSAPOG00000011658rpa19962.520Acanthochromis_polyacanthus
ENSECAG00000023886RPA19062.613ENSAPOG00000019409RPA18862.613Acanthochromis_polyacanthus
ENSECAG00000023886RPA19992.775ENSAMEG00000007706RPA19892.775Ailuropoda_melanoleuca
ENSECAG00000023886RPA19558.277ENSACIG00000012881RPA19958.277Amphilophus_citrinellus
ENSECAG00000023886RPA19558.574ENSACIG00000007277rpa19958.574Amphilophus_citrinellus
ENSECAG00000023886RPA19963.011ENSAOCG00000023376rpa19962.931Amphiprion_ocellaris
ENSECAG00000023886RPA19953.917ENSAOCG00000009003RPA19955.023Amphiprion_ocellaris
ENSECAG00000023886RPA19953.625ENSAPEG00000019132RPA19954.079Amphiprion_percula
ENSECAG00000023886RPA19962.848ENSAPEG00000008634rpa19962.931Amphiprion_percula
ENSECAG00000023886RPA19955.283ENSATEG00000006443RPA19955.283Anabas_testudineus
ENSECAG00000023886RPA19464.089ENSATEG00000022024rpa19963.918Anabas_testudineus
ENSECAG00000023886RPA19866.322ENSAPLG00000012442RPA110063.220Anas_platyrhynchos
ENSECAG00000023886RPA19963.023ENSACAG00000014490RPA19963.813Anolis_carolinensis
ENSECAG00000023886RPA19890.547ENSANAG00000023456RPA110090.547Aotus_nancymaae
ENSECAG00000023886RPA19958.150ENSACLG00000005223RPA19958.150Astatotilapia_calliptera
ENSECAG00000023886RPA19364.111ENSACLG00000006640rpa19964.111Astatotilapia_calliptera
ENSECAG00000023886RPA19962.215ENSAMXG00000008418rpa19962.215Astyanax_mexicanus
ENSECAG00000023886RPA110093.182ENSBTAG00000009711RPA110093.182Bos_taurus
ENSECAG00000023886RPA17630.316WBGene00017546rpa-17130.316Caenorhabditis_elegans
ENSECAG00000023886RPA110090.584ENSCJAG00000001848RPA110090.584Callithrix_jacchus
ENSECAG00000023886RPA110092.695ENSCAFG00000019249RPA110092.695Canis_familiaris
ENSECAG00000023886RPA110092.695ENSCAFG00020009847RPA110092.695Canis_lupus_dingo
ENSECAG00000023886RPA110092.857ENSCHIG00000026308RPA110092.857Capra_hircus
ENSECAG00000023886RPA110091.896ENSTSYG00000003482-10091.896Carlito_syrichta
ENSECAG00000023886RPA110087.987ENSCPOG00000000035RPA110087.987Cavia_porcellus
ENSECAG00000023886RPA110079.645ENSCCAG00000010981RPA110079.645Cebus_capucinus
ENSECAG00000023886RPA19989.088ENSCLAG00000005185-9989.088Chinchilla_lanigera
ENSECAG00000023886RPA110084.091ENSCLAG00000015045-10083.929Chinchilla_lanigera
ENSECAG00000023886RPA110078.352ENSCSAG00000013833RPA110079.032Chlorocebus_sabaeus
ENSECAG00000023886RPA17192.255ENSCHOG00000009454-10092.255Choloepus_hoffmanni
ENSECAG00000023886RPA19589.116ENSCHOG00000013540-10089.116Choloepus_hoffmanni
ENSECAG00000023886RPA19978.699ENSCPBG00000020377RPA19979.474Chrysemys_picta_bellii
ENSECAG00000023886RPA19942.045ENSCING00000023482-9841.883Ciona_intestinalis
ENSECAG00000023886RPA19886.281ENSCANG00000030911RPA110086.281Colobus_angolensis_palliatus
ENSECAG00000023886RPA19988.997ENSCGRG00001008197Rpa19988.997Cricetulus_griseus_chok1gshd
ENSECAG00000023886RPA18187.574ENSCGRG00000000582Rpa19987.574Cricetulus_griseus_crigri
ENSECAG00000023886RPA19961.375ENSCSEG00000013066rpa19961.211Cynoglossus_semilaevis
ENSECAG00000023886RPA19951.510ENSCSEG00000012726RPA19852.811Cynoglossus_semilaevis
ENSECAG00000023886RPA19553.488ENSCVAG00000013446-9653.488Cyprinodon_variegatus
ENSECAG00000023886RPA19963.547ENSCVAG00000019431rpa19963.732Cyprinodon_variegatus
ENSECAG00000023886RPA19963.740ENSDARG00000003938rpa19963.577Danio_rerio
ENSECAG00000023886RPA19990.894ENSDNOG00000017218RPA19990.894Dasypus_novemcinctus
ENSECAG00000023886RPA110091.071ENSDORG00000006199Rpa110091.071Dipodomys_ordii
ENSECAG00000023886RPA19941.506FBgn0010173RpA-709941.868Drosophila_melanogaster
ENSECAG00000023886RPA18387.629ENSETEG00000017608RPA18287.629Echinops_telfairi
ENSECAG00000023886RPA19899.003ENSEASG00005009372RPA110096.931Equus_asinus_asinus
ENSECAG00000023886RPA16892.381ENSEEUG00000002186-6892.381Erinaceus_europaeus
ENSECAG00000023886RPA18856.169ENSELUG00000006136RPA19955.985Esox_lucius
ENSECAG00000023886RPA19961.588ENSELUG00000021071rpa19961.588Esox_lucius
ENSECAG00000023886RPA110091.248ENSFCAG00000006306RPA19991.248Felis_catus
ENSECAG00000023886RPA110075.767ENSFALG00000006575RPA19975.767Ficedula_albicollis
ENSECAG00000023886RPA19990.065ENSFDAG00000007720RPA19990.065Fukomys_damarensis
ENSECAG00000023886RPA19961.513ENSFHEG00000003580rpa19961.513Fundulus_heteroclitus
ENSECAG00000023886RPA19958.756ENSGMOG00000010382rpa19958.592Gadus_morhua
ENSECAG00000023886RPA19975.693ENSGALG00000003072RPA19975.693Gallus_gallus
ENSECAG00000023886RPA19954.669ENSGAFG00000020953RPA19955.371Gambusia_affinis
ENSECAG00000023886RPA19962.768ENSGAFG00000012916rpa19962.603Gambusia_affinis
ENSECAG00000023886RPA19961.211ENSGACG00000010856rpa19961.211Gasterosteus_aculeatus
ENSECAG00000023886RPA19978.699ENSGAGG00000013611RPA19978.699Gopherus_agassizii
ENSECAG00000023886RPA110087.338ENSGGOG00000014186RPA110087.338Gorilla_gorilla
ENSECAG00000023886RPA19654.167ENSHBUG00000009348RPA19954.167Haplochromis_burtoni
ENSECAG00000023886RPA19963.339ENSHBUG00000017773rpa19963.175Haplochromis_burtoni
ENSECAG00000023886RPA19989.739ENSHGLG00000008846RPA110089.739Heterocephalus_glaber_female
ENSECAG00000023886RPA110084.253ENSHGLG00100000799-10084.253Heterocephalus_glaber_male
ENSECAG00000023886RPA19989.739ENSHGLG00100017755-10089.739Heterocephalus_glaber_male
ENSECAG00000023886RPA19976.961ENSHGLG00100002005-9976.961Heterocephalus_glaber_male
ENSECAG00000023886RPA19944.228ENSHCOG00000000351RPA19844.228Hippocampus_comes
ENSECAG00000023886RPA19960.650ENSHCOG00000001401rpa19960.813Hippocampus_comes
ENSECAG00000023886RPA19962.500ENSIPUG00000004400rpa19962.500Ictalurus_punctatus
ENSECAG00000023886RPA19884.539ENSSTOG00000022475RPA19884.539Ictidomys_tridecemlineatus
ENSECAG00000023886RPA19590.646ENSJJAG00000000876Rpa19890.646Jaculus_jaculus
ENSECAG00000023886RPA19955.233ENSKMAG00000000234RPA19955.233Kryptolebias_marmoratus
ENSECAG00000023886RPA19961.601ENSKMAG00000005605rpa19962.092Kryptolebias_marmoratus
ENSECAG00000023886RPA19962.520ENSLBEG00000021604rpa19962.520Labrus_bergylta
ENSECAG00000023886RPA19862.358ENSLBEG00000002281RPA18662.358Labrus_bergylta
ENSECAG00000023886RPA18165.800ENSLACG00000007210RPA19965.800Latimeria_chalumnae
ENSECAG00000023886RPA19967.101ENSLOCG00000006397rpa19967.101Lepisosteus_oculatus
ENSECAG00000023886RPA19990.484ENSLAFG00000015354RPA19990.484Loxodonta_africana
ENSECAG00000023886RPA18290.119ENSMFAG00000036138-10090.927Macaca_fascicularis
ENSECAG00000023886RPA19889.917ENSMMUG00000011604-10090.594Macaca_mulatta
ENSECAG00000023886RPA110083.144ENSMMUG00000002442-10083.144Macaca_mulatta
ENSECAG00000023886RPA110086.526ENSMNEG00000031632-10087.196Macaca_nemestrina
ENSECAG00000023886RPA18988.000ENSMNEG00000029837-10088.000Macaca_nemestrina
ENSECAG00000023886RPA19883.828ENSMLEG00000038768-10084.514Mandrillus_leucophaeus
ENSECAG00000023886RPA19963.339ENSMAMG00000017993rpa19963.175Mastacembelus_armatus
ENSECAG00000023886RPA19952.226ENSMAMG00000020097RPA19951.929Mastacembelus_armatus
ENSECAG00000023886RPA19958.150ENSMZEG00005024731RPA19958.150Maylandia_zebra
ENSECAG00000023886RPA19963.339ENSMZEG00005007551rpa19963.175Maylandia_zebra
ENSECAG00000023886RPA19975.246ENSMGAG00000005315RPA19875.246Meleagris_gallopavo
ENSECAG00000023886RPA19790.167ENSMAUG00000010474Rpa19990.167Mesocricetus_auratus
ENSECAG00000023886RPA110092.370ENSMICG00000012867RPA110092.370Microcebus_murinus
ENSECAG00000023886RPA19989.560ENSMOCG00000013019Rpa19989.560Microtus_ochrogaster
ENSECAG00000023886RPA19961.275ENSMMOG00000014292rpa19962.226Mola_mola
ENSECAG00000023886RPA19756.594ENSMMOG00000010868RPA19756.594Mola_mola
ENSECAG00000023886RPA19986.319ENSMODG00000010549RPA19986.319Monodelphis_domestica
ENSECAG00000023886RPA19859.442ENSMALG00000001208RPA18161.818Monopterus_albus
ENSECAG00000023886RPA19964.532ENSMALG00000011453rpa19964.532Monopterus_albus
ENSECAG00000023886RPA19988.312MGP_CAROLIEiJ_G0016734Rpa19988.312Mus_caroli
ENSECAG00000023886RPA19986.013ENSMUSG00000000751Rpa19986.013Mus_musculus
ENSECAG00000023886RPA19989.176MGP_PahariEiJ_G0017871Rpa19989.176Mus_pahari
ENSECAG00000023886RPA19986.035MGP_SPRETEiJ_G0017577Rpa19986.035Mus_spretus
ENSECAG00000023886RPA110092.532ENSMPUG00000013119RPA110092.532Mustela_putorius_furo
ENSECAG00000023886RPA110089.533ENSMLUG00000006113RPA110089.533Myotis_lucifugus
ENSECAG00000023886RPA19588.795ENSNGAG00000004522Rpa19488.795Nannospalax_galili
ENSECAG00000023886RPA19463.903ENSNBRG00000020595rpa19963.903Neolamprologus_brichardi
ENSECAG00000023886RPA19656.830ENSNBRG00000009672RPA19556.830Neolamprologus_brichardi
ENSECAG00000023886RPA110089.610ENSNLEG00000017149RPA110090.113Nomascus_leucogenys
ENSECAG00000023886RPA19875.083ENSMEUG00000006714RPA19975.083Notamacropus_eugenii
ENSECAG00000023886RPA19586.600ENSODEG00000009038RPA19686.600Octodon_degus
ENSECAG00000023886RPA19963.489ENSONIG00000013135rpa19963.328Oreochromis_niloticus
ENSECAG00000023886RPA19884.718ENSOANG00000010880RPA19984.551Ornithorhynchus_anatinus
ENSECAG00000023886RPA110088.080ENSOCUG00000001504RPA110088.080Oryctolagus_cuniculus
ENSECAG00000023886RPA19962.908ENSORLG00000004856rpa19962.908Oryzias_latipes
ENSECAG00000023886RPA19953.446ENSORLG00000003368RPA19953.446Oryzias_latipes
ENSECAG00000023886RPA19963.072ENSORLG00020008980rpa19963.072Oryzias_latipes_hni
ENSECAG00000023886RPA19952.180ENSORLG00020015284RPA19952.180Oryzias_latipes_hni
ENSECAG00000023886RPA19963.072ENSORLG00015013982rpa19963.072Oryzias_latipes_hsok
ENSECAG00000023886RPA16761.594ENSORLG00015005867-9461.594Oryzias_latipes_hsok
ENSECAG00000023886RPA19953.978ENSORLG00015020383RPA19953.978Oryzias_latipes_hsok
ENSECAG00000023886RPA19960.784ENSOMEG00000004704rpa19960.621Oryzias_melastigma
ENSECAG00000023886RPA19953.110ENSOMEG00000011040RPA19956.014Oryzias_melastigma
ENSECAG00000023886RPA110092.208ENSOGAG00000005581-10092.208Otolemur_garnettii
ENSECAG00000023886RPA19490.175ENSOGAG00000029379-10093.651Otolemur_garnettii
ENSECAG00000023886RPA110092.857ENSOARG00000014479RPA110092.857Ovis_aries
ENSECAG00000023886RPA110090.097ENSPPAG00000039680RPA110090.600Pan_paniscus
ENSECAG00000023886RPA110090.924ENSPPRG00000011807RPA19990.924Panthera_pardus
ENSECAG00000023886RPA110090.762ENSPTIG00000007898RPA19990.762Panthera_tigris_altaica
ENSECAG00000023886RPA110090.097ENSPTRG00000008539RPA110090.600Pan_troglodytes
ENSECAG00000023886RPA110089.773ENSPANG00000024592RPA110090.438Papio_anubis
ENSECAG00000023886RPA19461.063ENSPKIG00000008053rpa19462.158Paramormyrops_kingsleyae
ENSECAG00000023886RPA19777.833ENSPSIG00000015617RPA19977.833Pelodiscus_sinensis
ENSECAG00000023886RPA19954.072ENSPMGG00000000543RPA19956.942Periophthalmus_magnuspinnatus
ENSECAG00000023886RPA19861.692ENSPMGG00000011589rpa19961.692Periophthalmus_magnuspinnatus
ENSECAG00000023886RPA19989.886ENSPEMG00000021061Rpa19989.886Peromyscus_maniculatus_bairdii
ENSECAG00000023886RPA19984.228ENSPCIG00000019049RPA19984.441Phascolarctos_cinereus
ENSECAG00000023886RPA19962.890ENSPFOG00000003987rpa19962.890Poecilia_formosa
ENSECAG00000023886RPA19962.562ENSPLAG00000004984rpa19962.562Poecilia_latipinna
ENSECAG00000023886RPA19454.386ENSPLAG00000008844-9754.226Poecilia_latipinna
ENSECAG00000023886RPA19962.890ENSPMEG00000020602rpa19963.066Poecilia_mexicana
ENSECAG00000023886RPA19454.267ENSPMEG00000003627-9754.823Poecilia_mexicana
ENSECAG00000023886RPA19952.950ENSPREG00000010119RPA110052.241Poecilia_reticulata
ENSECAG00000023886RPA19156.050ENSPREG00000010174rpa19555.360Poecilia_reticulata
ENSECAG00000023886RPA110093.182ENSPCOG00000001799RPA110093.182Propithecus_coquereli
ENSECAG00000023886RPA110092.695ENSPVAG00000002149RPA110092.695Pteropus_vampyrus
ENSECAG00000023886RPA19957.837ENSPNYG00000024165RPA19957.837Pundamilia_nyererei
ENSECAG00000023886RPA19963.502ENSPNYG00000016316rpa19964.062Pundamilia_nyererei
ENSECAG00000023886RPA19855.150ENSPNAG00000008599rpa19655.385Pygocentrus_nattereri
ENSECAG00000023886RPA19989.233ENSRNOG00000003123Rpa19989.233Rattus_norvegicus
ENSECAG00000023886RPA110089.627ENSRBIG00000036587RPA110089.627Rhinopithecus_bieti
ENSECAG00000023886RPA110083.955ENSRROG00000043278RPA110083.955Rhinopithecus_roxellana
ENSECAG00000023886RPA19732.730YAR007CRFA19732.566Saccharomyces_cerevisiae
ENSECAG00000023886RPA19886.589ENSSBOG00000030233RPA19986.589Saimiri_boliviensis_boliviensis
ENSECAG00000023886RPA19986.230ENSSHAG00000007969RPA19886.557Sarcophilus_harrisii
ENSECAG00000023886RPA19964.542ENSSFOG00015005362rpa19264.542Scleropages_formosus
ENSECAG00000023886RPA19951.897ENSSMAG00000019746RPA19952.115Scophthalmus_maximus
ENSECAG00000023886RPA19964.484ENSSDUG00000011949rpa19964.321Seriola_dumerili
ENSECAG00000023886RPA18965.509ENSSDUG00000016358RPA18565.000Seriola_dumerili
ENSECAG00000023886RPA18965.429ENSSLDG00000020784RPA18465.068Seriola_lalandi_dorsalis
ENSECAG00000023886RPA19964.484ENSSLDG00000011806rpa19964.321Seriola_lalandi_dorsalis
ENSECAG00000023886RPA18882.353ENSSARG00000007506RPA110070.413Sorex_araneus
ENSECAG00000023886RPA19773.950ENSSPUG00000007223RPA19973.950Sphenodon_punctatus
ENSECAG00000023886RPA19658.347ENSSPAG00000011165RPA19758.305Stegastes_partitus
ENSECAG00000023886RPA19962.520ENSSPAG00000009903rpa19962.357Stegastes_partitus
ENSECAG00000023886RPA19893.035ENSSSCG00000017822RPA110093.035Sus_scrofa
ENSECAG00000023886RPA110075.365ENSTGUG00000005775RPA19975.365Taeniopygia_guttata
ENSECAG00000023886RPA19062.617ENSTRUG00000000405RPA18458.613Takifugu_rubripes
ENSECAG00000023886RPA19963.651ENSTRUG00000003616rpa19963.487Takifugu_rubripes
ENSECAG00000023886RPA19964.437ENSTNIG00000016199rpa19964.437Tetraodon_nigroviridis
ENSECAG00000023886RPA187100.000ENSTBEG00000002709RPA189100.000Tupaia_belangeri
ENSECAG00000023886RPA19992.345ENSTTRG00000001169RPA19992.345Tursiops_truncatus
ENSECAG00000023886RPA18894.231ENSUAMG00000015676RPA19993.064Ursus_americanus
ENSECAG00000023886RPA110093.344ENSUMAG00000009328RPA110093.344Ursus_maritimus
ENSECAG00000023886RPA110090.909ENSVPAG00000009443RPA110090.909Vicugna_pacos
ENSECAG00000023886RPA110092.695ENSVVUG00000021715RPA110092.695Vulpes_vulpes
ENSECAG00000023886RPA19975.410ENSXETG00000013538rpa19976.230Xenopus_tropicalis
ENSECAG00000023886RPA19556.293ENSXCOG00000009899-9956.293Xiphophorus_couchianus
ENSECAG00000023886RPA19360.348ENSXCOG00000010068rpa19560.348Xiphophorus_couchianus
ENSECAG00000023886RPA19164.465ENSXMAG00000010333RPA18564.465Xiphophorus_maculatus
ENSECAG00000023886RPA19961.741ENSXMAG00000004102rpa19963.093Xiphophorus_maculatus

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