EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSECAG00000023886 (Gene tree)
Gene ID
100072427
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Plus strand
Length
62474 bases
Position
chr11:45786810-45849283
Accession
22508
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000021472tRNA_anti-codonPF01336.254.7e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000025791-1851-ENSECAP00000021472616 (aa)XP_023508987F6YZ24
Gene Model
Click here to download ENSECAG00000023886's gene model file
Pathways
Pathway IDPathway NameSource
ecb03030DNA replicationKEGG
ecb03420Nucleotide excision repairKEGG
ecb03430Mismatch repairKEGG
ecb03440Homologous recombinationKEGG
ecb03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000023886's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000023886RPA19962.459ENSAPOG00000011658rpa19962.520Acanthochromis_polyacanthus
ENSECAG00000023886RPA19062.613ENSAPOG00000019409RPA18862.613Acanthochromis_polyacanthus
ENSECAG00000023886RPA19992.775ENSAMEG00000007706RPA19892.775Ailuropoda_melanoleuca
ENSECAG00000023886RPA19558.277ENSACIG00000012881RPA19958.277Amphilophus_citrinellus
ENSECAG00000023886RPA19558.574ENSACIG00000007277rpa19958.574Amphilophus_citrinellus
ENSECAG00000023886RPA19963.011ENSAOCG00000023376rpa19962.931Amphiprion_ocellaris
ENSECAG00000023886RPA19953.917ENSAOCG00000009003RPA19955.023Amphiprion_ocellaris
ENSECAG00000023886RPA19953.625ENSAPEG00000019132RPA19954.079Amphiprion_percula
ENSECAG00000023886RPA19962.848ENSAPEG00000008634rpa19962.931Amphiprion_percula
ENSECAG00000023886RPA19955.283ENSATEG00000006443RPA19955.283Anabas_testudineus
ENSECAG00000023886RPA19464.089ENSATEG00000022024rpa19963.918Anabas_testudineus
ENSECAG00000023886RPA19866.322ENSAPLG00000012442RPA110063.220Anas_platyrhynchos
ENSECAG00000023886RPA19963.023ENSACAG00000014490RPA19963.813Anolis_carolinensis
ENSECAG00000023886RPA19890.547ENSANAG00000023456RPA110090.547Aotus_nancymaae
ENSECAG00000023886RPA19958.150ENSACLG00000005223RPA19958.150Astatotilapia_calliptera
ENSECAG00000023886RPA19364.111ENSACLG00000006640rpa19964.111Astatotilapia_calliptera
ENSECAG00000023886RPA19962.215ENSAMXG00000008418rpa19962.215Astyanax_mexicanus
ENSECAG00000023886RPA110093.182ENSBTAG00000009711RPA110093.182Bos_taurus
ENSECAG00000023886RPA17630.316WBGene00017546rpa-17130.316Caenorhabditis_elegans
ENSECAG00000023886RPA110090.584ENSCJAG00000001848RPA110090.584Callithrix_jacchus
ENSECAG00000023886RPA110092.695ENSCAFG00000019249RPA110092.695Canis_familiaris
ENSECAG00000023886RPA110092.695ENSCAFG00020009847RPA110092.695Canis_lupus_dingo
ENSECAG00000023886RPA110092.857ENSCHIG00000026308RPA110092.857Capra_hircus
ENSECAG00000023886RPA110091.896ENSTSYG00000003482-10091.896Carlito_syrichta
ENSECAG00000023886RPA110087.987ENSCPOG00000000035RPA110087.987Cavia_porcellus
ENSECAG00000023886RPA110079.645ENSCCAG00000010981RPA110079.645Cebus_capucinus
ENSECAG00000023886RPA19989.088ENSCLAG00000005185-9989.088Chinchilla_lanigera
ENSECAG00000023886RPA110084.091ENSCLAG00000015045-10083.929Chinchilla_lanigera
ENSECAG00000023886RPA110078.352ENSCSAG00000013833RPA110079.032Chlorocebus_sabaeus
ENSECAG00000023886RPA17192.255ENSCHOG00000009454-10092.255Choloepus_hoffmanni
ENSECAG00000023886RPA19589.116ENSCHOG00000013540-10089.116Choloepus_hoffmanni
ENSECAG00000023886RPA19978.699ENSCPBG00000020377RPA19979.474Chrysemys_picta_bellii
ENSECAG00000023886RPA19942.045ENSCING00000023482-9841.883Ciona_intestinalis
ENSECAG00000023886RPA19886.281ENSCANG00000030911RPA110086.281Colobus_angolensis_palliatus
ENSECAG00000023886RPA19988.997ENSCGRG00001008197Rpa19988.997Cricetulus_griseus_chok1gshd
ENSECAG00000023886RPA18187.574ENSCGRG00000000582Rpa19987.574Cricetulus_griseus_crigri
ENSECAG00000023886RPA19961.375ENSCSEG00000013066rpa19961.211Cynoglossus_semilaevis
ENSECAG00000023886RPA19951.510ENSCSEG00000012726RPA19852.811Cynoglossus_semilaevis
ENSECAG00000023886RPA19553.488ENSCVAG00000013446-9653.488Cyprinodon_variegatus
ENSECAG00000023886RPA19963.547ENSCVAG00000019431rpa19963.732Cyprinodon_variegatus
ENSECAG00000023886RPA19963.740ENSDARG00000003938rpa19963.577Danio_rerio
ENSECAG00000023886RPA19990.894ENSDNOG00000017218RPA19990.894Dasypus_novemcinctus
ENSECAG00000023886RPA110091.071ENSDORG00000006199Rpa110091.071Dipodomys_ordii
ENSECAG00000023886RPA19941.506FBgn0010173RpA-709941.868Drosophila_melanogaster
ENSECAG00000023886RPA18387.629ENSETEG00000017608RPA18287.629Echinops_telfairi
ENSECAG00000023886RPA19899.003ENSEASG00005009372RPA110096.931Equus_asinus_asinus
ENSECAG00000023886RPA16892.381ENSEEUG00000002186-6892.381Erinaceus_europaeus
ENSECAG00000023886RPA18856.169ENSELUG00000006136RPA19955.985Esox_lucius
ENSECAG00000023886RPA19961.588ENSELUG00000021071rpa19961.588Esox_lucius
ENSECAG00000023886RPA110091.248ENSFCAG00000006306RPA19991.248Felis_catus
ENSECAG00000023886RPA110075.767ENSFALG00000006575RPA19975.767Ficedula_albicollis
ENSECAG00000023886RPA19990.065ENSFDAG00000007720RPA19990.065Fukomys_damarensis
ENSECAG00000023886RPA19961.513ENSFHEG00000003580rpa19961.513Fundulus_heteroclitus
ENSECAG00000023886RPA19958.756ENSGMOG00000010382rpa19958.592Gadus_morhua
ENSECAG00000023886RPA19975.693ENSGALG00000003072RPA19975.693Gallus_gallus
ENSECAG00000023886RPA19954.669ENSGAFG00000020953RPA19955.371Gambusia_affinis
ENSECAG00000023886RPA19962.768ENSGAFG00000012916rpa19962.603Gambusia_affinis
ENSECAG00000023886RPA19961.211ENSGACG00000010856rpa19961.211Gasterosteus_aculeatus
ENSECAG00000023886RPA19978.699ENSGAGG00000013611RPA19978.699Gopherus_agassizii
ENSECAG00000023886RPA110087.338ENSGGOG00000014186RPA110087.338Gorilla_gorilla
ENSECAG00000023886RPA19654.167ENSHBUG00000009348RPA19954.167Haplochromis_burtoni
ENSECAG00000023886RPA19963.339ENSHBUG00000017773rpa19963.175Haplochromis_burtoni
ENSECAG00000023886RPA19989.739ENSHGLG00000008846RPA110089.739Heterocephalus_glaber_female
ENSECAG00000023886RPA110084.253ENSHGLG00100000799-10084.253Heterocephalus_glaber_male
ENSECAG00000023886RPA19989.739ENSHGLG00100017755-10089.739Heterocephalus_glaber_male
ENSECAG00000023886RPA19976.961ENSHGLG00100002005-9976.961Heterocephalus_glaber_male
ENSECAG00000023886RPA19944.228ENSHCOG00000000351RPA19844.228Hippocampus_comes
ENSECAG00000023886RPA19960.650ENSHCOG00000001401rpa19960.813Hippocampus_comes
ENSECAG00000023886RPA19962.500ENSIPUG00000004400rpa19962.500Ictalurus_punctatus
ENSECAG00000023886RPA19884.539ENSSTOG00000022475RPA19884.539Ictidomys_tridecemlineatus
ENSECAG00000023886RPA19590.646ENSJJAG00000000876Rpa19890.646Jaculus_jaculus
ENSECAG00000023886RPA19955.233ENSKMAG00000000234RPA19955.233Kryptolebias_marmoratus
ENSECAG00000023886RPA19961.601ENSKMAG00000005605rpa19962.092Kryptolebias_marmoratus
ENSECAG00000023886RPA19962.520ENSLBEG00000021604rpa19962.520Labrus_bergylta
ENSECAG00000023886RPA19862.358ENSLBEG00000002281RPA18662.358Labrus_bergylta
ENSECAG00000023886RPA18165.800ENSLACG00000007210RPA19965.800Latimeria_chalumnae
ENSECAG00000023886RPA19967.101ENSLOCG00000006397rpa19967.101Lepisosteus_oculatus
ENSECAG00000023886RPA19990.484ENSLAFG00000015354RPA19990.484Loxodonta_africana
ENSECAG00000023886RPA18290.119ENSMFAG00000036138-10090.927Macaca_fascicularis
ENSECAG00000023886RPA19889.917ENSMMUG00000011604-10090.594Macaca_mulatta
ENSECAG00000023886RPA110083.144ENSMMUG00000002442-10083.144Macaca_mulatta
ENSECAG00000023886RPA110086.526ENSMNEG00000031632-10087.196Macaca_nemestrina
ENSECAG00000023886RPA18988.000ENSMNEG00000029837-10088.000Macaca_nemestrina
ENSECAG00000023886RPA19883.828ENSMLEG00000038768-10084.514Mandrillus_leucophaeus
ENSECAG00000023886RPA19963.339ENSMAMG00000017993rpa19963.175Mastacembelus_armatus
ENSECAG00000023886RPA19952.226ENSMAMG00000020097RPA19951.929Mastacembelus_armatus
ENSECAG00000023886RPA19958.150ENSMZEG00005024731RPA19958.150Maylandia_zebra
ENSECAG00000023886RPA19963.339ENSMZEG00005007551rpa19963.175Maylandia_zebra
ENSECAG00000023886RPA19975.246ENSMGAG00000005315RPA19875.246Meleagris_gallopavo
ENSECAG00000023886RPA19790.167ENSMAUG00000010474Rpa19990.167Mesocricetus_auratus
ENSECAG00000023886RPA110092.370ENSMICG00000012867RPA110092.370Microcebus_murinus
ENSECAG00000023886RPA19989.560ENSMOCG00000013019Rpa19989.560Microtus_ochrogaster
ENSECAG00000023886RPA19961.275ENSMMOG00000014292rpa19962.226Mola_mola
ENSECAG00000023886RPA19756.594ENSMMOG00000010868RPA19756.594Mola_mola
ENSECAG00000023886RPA19986.319ENSMODG00000010549RPA19986.319Monodelphis_domestica
ENSECAG00000023886RPA19859.442ENSMALG00000001208RPA18161.818Monopterus_albus
ENSECAG00000023886RPA19964.532ENSMALG00000011453rpa19964.532Monopterus_albus
ENSECAG00000023886RPA19988.312MGP_CAROLIEiJ_G0016734Rpa19988.312Mus_caroli
ENSECAG00000023886RPA19986.013ENSMUSG00000000751Rpa19986.013Mus_musculus
ENSECAG00000023886RPA19989.176MGP_PahariEiJ_G0017871Rpa19989.176Mus_pahari
ENSECAG00000023886RPA19986.035MGP_SPRETEiJ_G0017577Rpa19986.035Mus_spretus
ENSECAG00000023886RPA110092.532ENSMPUG00000013119RPA110092.532Mustela_putorius_furo
ENSECAG00000023886RPA110089.533ENSMLUG00000006113RPA110089.533Myotis_lucifugus
ENSECAG00000023886RPA19588.795ENSNGAG00000004522Rpa19488.795Nannospalax_galili
ENSECAG00000023886RPA19463.903ENSNBRG00000020595rpa19963.903Neolamprologus_brichardi
ENSECAG00000023886RPA19656.830ENSNBRG00000009672RPA19556.830Neolamprologus_brichardi
ENSECAG00000023886RPA110089.610ENSNLEG00000017149RPA110090.113Nomascus_leucogenys
ENSECAG00000023886RPA19875.083ENSMEUG00000006714RPA19975.083Notamacropus_eugenii
ENSECAG00000023886RPA19586.600ENSODEG00000009038RPA19686.600Octodon_degus
ENSECAG00000023886RPA19963.489ENSONIG00000013135rpa19963.328Oreochromis_niloticus
ENSECAG00000023886RPA19884.718ENSOANG00000010880RPA19984.551Ornithorhynchus_anatinus
ENSECAG00000023886RPA110088.080ENSOCUG00000001504RPA110088.080Oryctolagus_cuniculus
ENSECAG00000023886RPA19962.908ENSORLG00000004856rpa19962.908Oryzias_latipes
ENSECAG00000023886RPA19953.446ENSORLG00000003368RPA19953.446Oryzias_latipes
ENSECAG00000023886RPA19963.072ENSORLG00020008980rpa19963.072Oryzias_latipes_hni
ENSECAG00000023886RPA19952.180ENSORLG00020015284RPA19952.180Oryzias_latipes_hni
ENSECAG00000023886RPA19963.072ENSORLG00015013982rpa19963.072Oryzias_latipes_hsok
ENSECAG00000023886RPA16761.594ENSORLG00015005867-9461.594Oryzias_latipes_hsok
ENSECAG00000023886RPA19953.978ENSORLG00015020383RPA19953.978Oryzias_latipes_hsok
ENSECAG00000023886RPA19960.784ENSOMEG00000004704rpa19960.621Oryzias_melastigma
ENSECAG00000023886RPA19953.110ENSOMEG00000011040RPA19956.014Oryzias_melastigma
ENSECAG00000023886RPA110092.208ENSOGAG00000005581-10092.208Otolemur_garnettii
ENSECAG00000023886RPA19490.175ENSOGAG00000029379-10093.651Otolemur_garnettii
ENSECAG00000023886RPA110092.857ENSOARG00000014479RPA110092.857Ovis_aries
ENSECAG00000023886RPA110090.097ENSPPAG00000039680RPA110090.600Pan_paniscus
ENSECAG00000023886RPA110090.924ENSPPRG00000011807RPA19990.924Panthera_pardus
ENSECAG00000023886RPA110090.762ENSPTIG00000007898RPA19990.762Panthera_tigris_altaica
ENSECAG00000023886RPA110090.097ENSPTRG00000008539RPA110090.600Pan_troglodytes
ENSECAG00000023886RPA110089.773ENSPANG00000024592RPA110090.438Papio_anubis
ENSECAG00000023886RPA19461.063ENSPKIG00000008053rpa19462.158Paramormyrops_kingsleyae
ENSECAG00000023886RPA19777.833ENSPSIG00000015617RPA19977.833Pelodiscus_sinensis
ENSECAG00000023886RPA19954.072ENSPMGG00000000543RPA19956.942Periophthalmus_magnuspinnatus
ENSECAG00000023886RPA19861.692ENSPMGG00000011589rpa19961.692Periophthalmus_magnuspinnatus
ENSECAG00000023886RPA19989.886ENSPEMG00000021061Rpa19989.886Peromyscus_maniculatus_bairdii
ENSECAG00000023886RPA19984.228ENSPCIG00000019049RPA19984.441Phascolarctos_cinereus
ENSECAG00000023886RPA19962.890ENSPFOG00000003987rpa19962.890Poecilia_formosa
ENSECAG00000023886RPA19962.562ENSPLAG00000004984rpa19962.562Poecilia_latipinna
ENSECAG00000023886RPA19454.386ENSPLAG00000008844-9754.226Poecilia_latipinna
ENSECAG00000023886RPA19962.890ENSPMEG00000020602rpa19963.066Poecilia_mexicana
ENSECAG00000023886RPA19454.267ENSPMEG00000003627-9754.823Poecilia_mexicana
ENSECAG00000023886RPA19952.950ENSPREG00000010119RPA110052.241Poecilia_reticulata
ENSECAG00000023886RPA19156.050ENSPREG00000010174rpa19555.360Poecilia_reticulata
ENSECAG00000023886RPA110093.182ENSPCOG00000001799RPA110093.182Propithecus_coquereli
ENSECAG00000023886RPA110092.695ENSPVAG00000002149RPA110092.695Pteropus_vampyrus
ENSECAG00000023886RPA19957.837ENSPNYG00000024165RPA19957.837Pundamilia_nyererei
ENSECAG00000023886RPA19963.502ENSPNYG00000016316rpa19964.062Pundamilia_nyererei
ENSECAG00000023886RPA19855.150ENSPNAG00000008599rpa19655.385Pygocentrus_nattereri
ENSECAG00000023886RPA19989.233ENSRNOG00000003123Rpa19989.233Rattus_norvegicus
ENSECAG00000023886RPA110089.627ENSRBIG00000036587RPA110089.627Rhinopithecus_bieti
ENSECAG00000023886RPA110083.955ENSRROG00000043278RPA110083.955Rhinopithecus_roxellana
ENSECAG00000023886RPA19732.730YAR007CRFA19732.566Saccharomyces_cerevisiae
ENSECAG00000023886RPA19886.589ENSSBOG00000030233RPA19986.589Saimiri_boliviensis_boliviensis
ENSECAG00000023886RPA19986.230ENSSHAG00000007969RPA19886.557Sarcophilus_harrisii
ENSECAG00000023886RPA19964.542ENSSFOG00015005362rpa19264.542Scleropages_formosus
ENSECAG00000023886RPA19951.897ENSSMAG00000019746RPA19952.115Scophthalmus_maximus
ENSECAG00000023886RPA19964.484ENSSDUG00000011949rpa19964.321Seriola_dumerili
ENSECAG00000023886RPA18965.509ENSSDUG00000016358RPA18565.000Seriola_dumerili
ENSECAG00000023886RPA18965.429ENSSLDG00000020784RPA18465.068Seriola_lalandi_dorsalis
ENSECAG00000023886RPA19964.484ENSSLDG00000011806rpa19964.321Seriola_lalandi_dorsalis
ENSECAG00000023886RPA18882.353ENSSARG00000007506RPA110070.413Sorex_araneus
ENSECAG00000023886RPA19773.950ENSSPUG00000007223RPA19973.950Sphenodon_punctatus
ENSECAG00000023886RPA19658.347ENSSPAG00000011165RPA19758.305Stegastes_partitus
ENSECAG00000023886RPA19962.520ENSSPAG00000009903rpa19962.357Stegastes_partitus
ENSECAG00000023886RPA19893.035ENSSSCG00000017822RPA110093.035Sus_scrofa
ENSECAG00000023886RPA110075.365ENSTGUG00000005775RPA19975.365Taeniopygia_guttata
ENSECAG00000023886RPA19062.617ENSTRUG00000000405RPA18458.613Takifugu_rubripes
ENSECAG00000023886RPA19963.651ENSTRUG00000003616rpa19963.487Takifugu_rubripes
ENSECAG00000023886RPA19964.437ENSTNIG00000016199rpa19964.437Tetraodon_nigroviridis
ENSECAG00000023886RPA187100.000ENSTBEG00000002709RPA189100.000Tupaia_belangeri
ENSECAG00000023886RPA19992.345ENSTTRG00000001169RPA19992.345Tursiops_truncatus
ENSECAG00000023886RPA18894.231ENSUAMG00000015676RPA19993.064Ursus_americanus
ENSECAG00000023886RPA110093.344ENSUMAG00000009328RPA110093.344Ursus_maritimus
ENSECAG00000023886RPA110090.909ENSVPAG00000009443RPA110090.909Vicugna_pacos
ENSECAG00000023886RPA110092.695ENSVVUG00000021715RPA110092.695Vulpes_vulpes
ENSECAG00000023886RPA19975.410ENSXETG00000013538rpa19976.230Xenopus_tropicalis
ENSECAG00000023886RPA19556.293ENSXCOG00000009899-9956.293Xiphophorus_couchianus
ENSECAG00000023886RPA19360.348ENSXCOG00000010068rpa19560.348Xiphophorus_couchianus
ENSECAG00000023886RPA19164.465ENSXMAG00000010333RPA18564.465Xiphophorus_maculatus
ENSECAG00000023886RPA19961.741ENSXMAG00000004102rpa19963.093Xiphophorus_maculatus

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