EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000023932 (Gene tree)
Gene ID: 100070669
Gene Symbol: SRSF6
Alias: -
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 5579 bases
Position: chr22:33838907-33844485
Accession: 51612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000043604	RRM_1	PF00076.22	8.5e-33	1	2
ENSECAP00000043604	RRM_1	PF00076.22	8.5e-33	2	2
ENSECAP00000021390	RRM_1	PF00076.22	1e-32	1	2
ENSECAP00000021390	RRM_1	PF00076.22	1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000059365	-	975	-	ENSECAP00000043604	324 (aa)	-	-
ENSECAT00000025696	-	1035	-	ENSECAP00000021390	344 (aa)	XP_023482363	F6XWC6

Gene Model

Click here to download ENSECAG00000023932's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03040	Spliceosome	KEGG
ecb05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000023932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000023932	SRSF6	52	41.714	ENSECAG00000009116	SRSF9	71	42.286
ENSECAG00000023932	SRSF6	55	65.922	ENSECAG00000026873	SRSF5	87	62.097
ENSECAG00000023932	SRSF6	61	41.148	ENSECAG00000016654	SRSF1	78	42.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000023932	SRSF6	100	96.821	ENSG00000124193	SRSF6	100	96.821	Homo_sapiens
ENSECAG00000023932	SRSF6	94	83.951	ENSAMEG00000003710	SRSF6	94	83.951	Ailuropoda_melanoleuca
ENSECAG00000023932	SRSF6	88	65.789	ENSACIG00000020091	-	95	81.102	Amphilophus_citrinellus
ENSECAG00000023932	SRSF6	97	62.353	ENSACIG00000023658	-	69	75.113	Amphilophus_citrinellus
ENSECAG00000023932	SRSF6	56	85.792	ENSAOCG00000004309	-	57	83.696	Amphiprion_ocellaris
ENSECAG00000023932	SRSF6	58	82.632	ENSAPEG00000020746	-	66	80.319	Amphiprion_percula
ENSECAG00000023932	SRSF6	56	88.649	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSECAG00000023932	SRSF6	56	83.516	ENSATEG00000007255	-	71	80.541	Anabas_testudineus
ENSECAG00000023932	SRSF6	56	93.443	ENSACAG00000002061	SRSF6	92	69.565	Anolis_carolinensis
ENSECAG00000023932	SRSF6	100	96.243	ENSANAG00000024080	SRSF6	100	96.243	Aotus_nancymaae
ENSECAG00000023932	SRSF6	56	87.097	ENSAMXG00000003101	-	51	84.737	Astyanax_mexicanus
ENSECAG00000023932	SRSF6	56	83.333	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSECAG00000023932	SRSF6	100	98.551	ENSBTAG00000008527	SRSF6	100	98.551	Bos_taurus
ENSECAG00000023932	SRSF6	82	97.761	ENSCJAG00000048403	SRSF6	99	97.761	Callithrix_jacchus
ENSECAG00000023932	SRSF6	100	98.841	ENSCAFG00000009289	SRSF6	100	98.841	Canis_familiaris
ENSECAG00000023932	SRSF6	100	98.841	ENSCAFG00020013559	SRSF6	100	98.841	Canis_lupus_dingo
ENSECAG00000023932	SRSF6	100	98.551	ENSCHIG00000009148	-	100	98.551	Capra_hircus
ENSECAG00000023932	SRSF6	100	99.130	ENSCHIG00000015890	-	100	99.130	Capra_hircus
ENSECAG00000023932	SRSF6	100	82.609	ENSTSYG00000026476	SRSF6	100	82.609	Carlito_syrichta
ENSECAG00000023932	SRSF6	94	80.186	ENSCPOG00000011761	SRSF6	70	95.455	Cavia_porcellus
ENSECAG00000023932	SRSF6	94	64.308	ENSCCAG00000018540	-	62	86.702	Cebus_capucinus
ENSECAG00000023932	SRSF6	100	96.532	ENSCCAG00000026018	-	100	96.532	Cebus_capucinus
ENSECAG00000023932	SRSF6	100	96.812	ENSCATG00000030794	SRSF6	100	96.812	Cercocebus_atys
ENSECAG00000023932	SRSF6	94	96.605	ENSCLAG00000010247	SRSF6	94	95.679	Chinchilla_lanigera
ENSECAG00000023932	SRSF6	100	96.812	ENSCSAG00000014022	SRSF6	100	96.812	Chlorocebus_sabaeus
ENSECAG00000023932	SRSF6	57	91.489	ENSCPBG00000018200	SRSF6	94	72.086	Chrysemys_picta_bellii
ENSECAG00000023932	SRSF6	100	96.522	ENSCANG00000037774	-	100	96.522	Colobus_angolensis_palliatus
ENSECAG00000023932	SRSF6	100	82.319	ENSCANG00000042529	-	100	82.319	Colobus_angolensis_palliatus
ENSECAG00000023932	SRSF6	94	96.605	ENSCGRG00001022339	Srsf6	95	95.679	Cricetulus_griseus_chok1gshd
ENSECAG00000023932	SRSF6	56	83.957	ENSDARG00000016783	srsf6b	82	92.308	Danio_rerio
ENSECAG00000023932	SRSF6	94	95.679	ENSDNOG00000008410	SRSF6	54	98.930	Dasypus_novemcinctus
ENSECAG00000023932	SRSF6	94	96.615	ENSDORG00000028378	Srsf6	94	95.988	Dipodomys_ordii
ENSECAG00000023932	SRSF6	93	75.000	ENSETEG00000006221	SRSF6	94	90.123	Echinops_telfairi
ENSECAG00000023932	SRSF6	100	100.000	ENSEASG00005023429	SRSF6	100	100.000	Equus_asinus_asinus
ENSECAG00000023932	SRSF6	66	78.761	ENSELUG00000013506	SRSF6	70	89.744	Esox_lucius
ENSECAG00000023932	SRSF6	56	86.022	ENSELUG00000024182	SRSF6	76	92.308	Esox_lucius
ENSECAG00000023932	SRSF6	100	98.841	ENSFCAG00000032814	SRSF6	100	98.841	Felis_catus
ENSECAG00000023932	SRSF6	94	80.556	ENSFDAG00000012191	SRSF6	93	77.160	Fukomys_damarensis
ENSECAG00000023932	SRSF6	89	71.724	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSECAG00000023932	SRSF6	56	82.320	ENSGMOG00000014458	srsf6a	52	77.604	Gadus_morhua
ENSECAG00000023932	SRSF6	55	72.626	ENSGMOG00000006105	srsf6a	62	70.950	Gadus_morhua
ENSECAG00000023932	SRSF6	56	89.840	ENSGALG00000000990	SRSF6	94	71.212	Gallus_gallus
ENSECAG00000023932	SRSF6	87	59.467	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSECAG00000023932	SRSF6	57	91.489	ENSGAGG00000003238	SRSF6	94	72.086	Gopherus_agassizii
ENSECAG00000023932	SRSF6	100	96.821	ENSGGOG00000009808	SRSF6	100	96.821	Gorilla_gorilla
ENSECAG00000023932	SRSF6	67	74.123	ENSHBUG00000006386	-	58	84.239	Haplochromis_burtoni
ENSECAG00000023932	SRSF6	94	96.605	ENSHGLG00000007348	SRSF6	94	95.679	Heterocephalus_glaber_female
ENSECAG00000023932	SRSF6	90	76.774	ENSHGLG00000007701	-	58	78.075	Heterocephalus_glaber_female
ENSECAG00000023932	SRSF6	94	80.864	ENSHGLG00100005043	SRSF6	93	77.469	Heterocephalus_glaber_male
ENSECAG00000023932	SRSF6	56	82.514	ENSHCOG00000002740	srsf6a	57	82.065	Hippocampus_comes
ENSECAG00000023932	SRSF6	56	86.885	ENSIPUG00000004776	-	64	86.413	Ictalurus_punctatus
ENSECAG00000023932	SRSF6	94	96.000	ENSSTOG00000010866	SRSF6	94	95.370	Ictidomys_tridecemlineatus
ENSECAG00000023932	SRSF6	81	66.904	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSECAG00000023932	SRSF6	56	84.783	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSECAG00000023932	SRSF6	89	84.138	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSECAG00000023932	SRSF6	69	95.397	ENSLAFG00000006682	SRSF6	89	70.306	Loxodonta_africana
ENSECAG00000023932	SRSF6	100	96.812	ENSMFAG00000036925	SRSF6	100	96.812	Macaca_fascicularis
ENSECAG00000023932	SRSF6	100	96.812	ENSMMUG00000006742	SRSF6	100	96.812	Macaca_mulatta
ENSECAG00000023932	SRSF6	93	95.342	ENSMNEG00000038270	-	94	94.444	Macaca_nemestrina
ENSECAG00000023932	SRSF6	100	96.232	ENSMNEG00000027392	-	100	96.232	Macaca_nemestrina
ENSECAG00000023932	SRSF6	63	95.833	ENSMLEG00000031524	SRSF6	100	95.833	Mandrillus_leucophaeus
ENSECAG00000023932	SRSF6	56	88.108	ENSMAMG00000017161	srsf6a	64	77.578	Mastacembelus_armatus
ENSECAG00000023932	SRSF6	56	83.978	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSECAG00000023932	SRSF6	66	72.294	ENSMZEG00005008032	-	57	84.239	Maylandia_zebra
ENSECAG00000023932	SRSF6	100	96.821	ENSMICG00000008537	SRSF6	100	96.821	Microcebus_murinus
ENSECAG00000023932	SRSF6	57	94.624	ENSMODG00000003107	SRSF6	55	95.745	Monodelphis_domestica
ENSECAG00000023932	SRSF6	94	95.679	MGP_CAROLIEiJ_G0024606	Srsf6	58	98.718	Mus_caroli
ENSECAG00000023932	SRSF6	94	95.988	ENSMUSG00000016921	Srsf6	95	95.062	Mus_musculus
ENSECAG00000023932	SRSF6	94	95.988	MGP_PahariEiJ_G0026050	Srsf6	58	98.718	Mus_pahari
ENSECAG00000023932	SRSF6	94	95.988	MGP_SPRETEiJ_G0025528	Srsf6	95	95.062	Mus_spretus
ENSECAG00000023932	SRSF6	89	98.958	ENSMPUG00000017692	SRSF6	99	98.958	Mustela_putorius_furo
ENSECAG00000023932	SRSF6	58	72.193	ENSMLUG00000016618	SRSF6	54	72.193	Myotis_lucifugus
ENSECAG00000023932	SRSF6	94	94.753	ENSNGAG00000017560	Srsf6	95	93.210	Nannospalax_galili
ENSECAG00000023932	SRSF6	56	88.525	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSECAG00000023932	SRSF6	56	83.060	ENSNBRG00000014709	-	58	84.239	Neolamprologus_brichardi
ENSECAG00000023932	SRSF6	100	96.821	ENSNLEG00000006524	SRSF6	100	96.821	Nomascus_leucogenys
ENSECAG00000023932	SRSF6	57	94.624	ENSMEUG00000014615	SRSF6	62	95.745	Notamacropus_eugenii
ENSECAG00000023932	SRSF6	64	96.172	ENSOPRG00000002017	-	81	96.172	Ochotona_princeps
ENSECAG00000023932	SRSF6	56	85.792	ENSONIG00000001925	-	52	88.172	Oreochromis_niloticus
ENSECAG00000023932	SRSF6	56	84.699	ENSONIG00000020247	-	53	84.783	Oreochromis_niloticus
ENSECAG00000023932	SRSF6	71	51.092	ENSOCUG00000023999	-	70	62.570	Oryctolagus_cuniculus
ENSECAG00000023932	SRSF6	58	71.569	ENSOCUG00000009785	-	64	76.289	Oryctolagus_cuniculus
ENSECAG00000023932	SRSF6	94	93.210	ENSOGAG00000014468	SRSF6	94	93.498	Otolemur_garnettii
ENSECAG00000023932	SRSF6	100	95.072	ENSOARG00000003117	SRSF6	100	95.072	Ovis_aries
ENSECAG00000023932	SRSF6	90	64.309	ENSPPAG00000043131	-	58	83.957	Pan_paniscus
ENSECAG00000023932	SRSF6	100	96.532	ENSPPAG00000034327	-	100	96.532	Pan_paniscus
ENSECAG00000023932	SRSF6	100	98.841	ENSPPRG00000008917	SRSF6	100	98.841	Panthera_pardus
ENSECAG00000023932	SRSF6	63	98.148	ENSPTIG00000019153	SRSF6	100	98.148	Panthera_tigris_altaica
ENSECAG00000023932	SRSF6	90	64.309	ENSPTRG00000046274	-	58	83.957	Pan_troglodytes
ENSECAG00000023932	SRSF6	100	96.532	ENSPTRG00000044686	-	100	96.532	Pan_troglodytes
ENSECAG00000023932	SRSF6	100	96.812	ENSPANG00000035224	SRSF6	100	96.812	Papio_anubis
ENSECAG00000023932	SRSF6	100	67.335	ENSPKIG00000018463	-	77	93.590	Paramormyrops_kingsleyae
ENSECAG00000023932	SRSF6	55	74.586	ENSPKIG00000015703	-	95	60.403	Paramormyrops_kingsleyae
ENSECAG00000023932	SRSF6	93	71.382	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSECAG00000023932	SRSF6	57	94.624	ENSPCIG00000003820	SRSF6	58	96.154	Phascolarctos_cinereus
ENSECAG00000023932	SRSF6	56	87.931	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSECAG00000023932	SRSF6	87	62.928	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSECAG00000023932	SRSF6	56	85.326	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSECAG00000023932	SRSF6	100	96.821	ENSPPYG00000011019	SRSF6	100	96.821	Pongo_abelii
ENSECAG00000023932	SRSF6	92	91.195	ENSPCAG00000010954	SRSF6	96	90.093	Procavia_capensis
ENSECAG00000023932	SRSF6	100	97.110	ENSPCOG00000026364	SRSF6	100	97.110	Propithecus_coquereli
ENSECAG00000023932	SRSF6	100	96.232	ENSPVAG00000015232	SRSF6	100	96.232	Pteropus_vampyrus
ENSECAG00000023932	SRSF6	56	83.060	ENSPNYG00000004944	-	58	84.239	Pundamilia_nyererei
ENSECAG00000023932	SRSF6	56	88.525	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSECAG00000023932	SRSF6	94	95.988	ENSRNOG00000006380	Srsf6	95	95.062	Rattus_norvegicus
ENSECAG00000023932	SRSF6	100	95.072	ENSRBIG00000041414	SRSF6	100	95.072	Rhinopithecus_bieti
ENSECAG00000023932	SRSF6	100	96.812	ENSRROG00000029989	SRSF6	100	96.812	Rhinopithecus_roxellana
ENSECAG00000023932	SRSF6	100	96.243	ENSSBOG00000033708	-	100	96.243	Saimiri_boliviensis_boliviensis
ENSECAG00000023932	SRSF6	93	65.625	ENSSBOG00000034078	-	54	76.243	Saimiri_boliviensis_boliviensis
ENSECAG00000023932	SRSF6	57	94.624	ENSSHAG00000012805	SRSF6	55	95.745	Sarcophilus_harrisii
ENSECAG00000023932	SRSF6	93	64.865	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSECAG00000023932	SRSF6	56	90.055	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSECAG00000023932	SRSF6	56	80.769	ENSSMAG00000017447	-	55	80.435	Scophthalmus_maximus
ENSECAG00000023932	SRSF6	62	69.951	ENSSMAG00000014819	-	63	62.500	Scophthalmus_maximus
ENSECAG00000023932	SRSF6	56	88.108	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSECAG00000023932	SRSF6	56	88.108	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSECAG00000023932	SRSF6	75	96.911	ENSSARG00000001602	SRSF6	100	96.911	Sorex_araneus
ENSECAG00000023932	SRSF6	56	93.989	ENSSPUG00000004967	SRSF6	94	69.659	Sphenodon_punctatus
ENSECAG00000023932	SRSF6	81	70.412	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSECAG00000023932	SRSF6	100	98.261	ENSSSCG00000007362	SRSF6	100	98.261	Sus_scrofa
ENSECAG00000023932	SRSF6	56	94.022	ENSTGUG00000003455	SRSF6	94	84.709	Taeniopygia_guttata
ENSECAG00000023932	SRSF6	93	69.737	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSECAG00000023932	SRSF6	85	92.466	ENSTBEG00000013448	SRSF6	92	72.852	Tupaia_belangeri
ENSECAG00000023932	SRSF6	75	97.683	ENSTTRG00000015410	SRSF6	100	97.683	Tursiops_truncatus
ENSECAG00000023932	SRSF6	100	98.841	ENSUAMG00000003559	SRSF6	100	98.841	Ursus_americanus
ENSECAG00000023932	SRSF6	63	98.148	ENSUMAG00000001154	SRSF6	100	98.148	Ursus_maritimus
ENSECAG00000023932	SRSF6	83	100.000	ENSVPAG00000003016	SRSF6	83	100.000	Vicugna_pacos
ENSECAG00000023932	SRSF6	56	86.885	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus