EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000023935 (Gene tree)
Gene ID: 100053213
Gene Symbol: CPSF2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 32223 bases
Position: chr24:35277411-35309633
Accession: 16834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000021492	Beta-Casp	PF10996.8	1.4e-20	1	1
ENSECAP00000021492	Lactamase_B	PF00753.27	2.1e-06	1	1
ENSECAP00000021492	RMMBL	PF07521.12	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000025815	-	4626	XM_001497084	ENSECAP00000021492	782 (aa)	XP_001497134	F6YTB2

Gene Model

Click here to download ENSECAG00000023935's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000023935's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000023935	CPSF2	100	99.488	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSECAG00000023935	CPSF2	100	85.805	ENSAPOG00000001242	cpsf2	100	85.805	Acanthochromis_polyacanthus
ENSECAG00000023935	CPSF2	100	86.203	ENSACIG00000009331	cpsf2	100	86.203	Amphilophus_citrinellus
ENSECAG00000023935	CPSF2	100	85.932	ENSAOCG00000014095	cpsf2	100	85.932	Amphiprion_ocellaris
ENSECAG00000023935	CPSF2	100	85.932	ENSAPEG00000009158	cpsf2	100	85.932	Amphiprion_percula
ENSECAG00000023935	CPSF2	96	86.184	ENSATEG00000017644	cpsf2	100	84.307	Anabas_testudineus
ENSECAG00000023935	CPSF2	100	95.924	ENSAPLG00000006330	CPSF2	100	95.924	Anas_platyrhynchos
ENSECAG00000023935	CPSF2	100	95.019	ENSACAG00000009245	CPSF2	100	95.019	Anolis_carolinensis
ENSECAG00000023935	CPSF2	100	99.488	ENSANAG00000022915	CPSF2	100	99.488	Aotus_nancymaae
ENSECAG00000023935	CPSF2	100	85.642	ENSAMXG00000018696	cpsf2	100	85.642	Astyanax_mexicanus
ENSECAG00000023935	CPSF2	100	99.488	ENSBTAG00000010227	CPSF2	100	99.488	Bos_taurus
ENSECAG00000023935	CPSF2	100	41.686	WBGene00017313	cpsf-2	100	41.149	Caenorhabditis_elegans
ENSECAG00000023935	CPSF2	100	99.488	ENSCJAG00000018069	CPSF2	100	99.488	Callithrix_jacchus
ENSECAG00000023935	CPSF2	100	99.616	ENSCAFG00000010909	CPSF2	100	99.616	Canis_familiaris
ENSECAG00000023935	CPSF2	100	99.616	ENSCAFG00020020670	CPSF2	100	99.616	Canis_lupus_dingo
ENSECAG00000023935	CPSF2	100	99.488	ENSCHIG00000023848	CPSF2	100	99.488	Capra_hircus
ENSECAG00000023935	CPSF2	100	98.338	ENSTSYG00000009036	CPSF2	100	98.338	Carlito_syrichta
ENSECAG00000023935	CPSF2	100	99.744	ENSCPOG00000010899	CPSF2	100	99.744	Cavia_porcellus
ENSECAG00000023935	CPSF2	100	99.488	ENSCCAG00000028088	CPSF2	100	99.488	Cebus_capucinus
ENSECAG00000023935	CPSF2	100	99.616	ENSCATG00000030132	CPSF2	100	99.616	Cercocebus_atys
ENSECAG00000023935	CPSF2	100	99.616	ENSCLAG00000012404	CPSF2	100	99.616	Chinchilla_lanigera
ENSECAG00000023935	CPSF2	100	99.616	ENSCSAG00000011300	CPSF2	100	99.616	Chlorocebus_sabaeus
ENSECAG00000023935	CPSF2	100	92.455	ENSCHOG00000012904	CPSF2	100	92.455	Choloepus_hoffmanni
ENSECAG00000023935	CPSF2	100	96.296	ENSCPBG00000008766	CPSF2	97	96.296	Chrysemys_picta_bellii
ENSECAG00000023935	CPSF2	100	54.670	ENSCING00000007881	-	100	54.296	Ciona_intestinalis
ENSECAG00000023935	CPSF2	94	99.590	ENSCANG00000041651	CPSF2	100	99.590	Colobus_angolensis_palliatus
ENSECAG00000023935	CPSF2	100	98.465	ENSCGRG00001006901	Cpsf2	100	98.465	Cricetulus_griseus_chok1gshd
ENSECAG00000023935	CPSF2	100	98.465	ENSCGRG00000012416	Cpsf2	100	98.465	Cricetulus_griseus_crigri
ENSECAG00000023935	CPSF2	100	83.777	ENSCSEG00000004116	cpsf2	100	83.777	Cynoglossus_semilaevis
ENSECAG00000023935	CPSF2	100	85.171	ENSCVAG00000000095	cpsf2	100	85.298	Cyprinodon_variegatus
ENSECAG00000023935	CPSF2	100	85.570	ENSDARG00000028971	cpsf2	100	85.570	Danio_rerio
ENSECAG00000023935	CPSF2	100	99.488	ENSDNOG00000042757	CPSF2	100	99.488	Dasypus_novemcinctus
ENSECAG00000023935	CPSF2	100	99.616	ENSDORG00000013709	Cpsf2	100	99.616	Dipodomys_ordii
ENSECAG00000023935	CPSF2	100	53.923	FBgn0027873	Cpsf100	100	53.683	Drosophila_melanogaster
ENSECAG00000023935	CPSF2	100	90.294	ENSETEG00000012123	CPSF2	100	90.294	Echinops_telfairi
ENSECAG00000023935	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSECAG00000023935	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSECAG00000023935	CPSF2	100	83.940	ENSELUG00000008442	cpsf2	100	83.940	Esox_lucius
ENSECAG00000023935	CPSF2	100	99.744	ENSFCAG00000007886	CPSF2	100	99.744	Felis_catus
ENSECAG00000023935	CPSF2	100	96.169	ENSFALG00000002412	CPSF2	100	96.169	Ficedula_albicollis
ENSECAG00000023935	CPSF2	100	99.616	ENSFDAG00000006327	CPSF2	100	99.616	Fukomys_damarensis
ENSECAG00000023935	CPSF2	96	84.444	ENSFHEG00000015465	cpsf2	98	84.706	Fundulus_heteroclitus
ENSECAG00000023935	CPSF2	100	83.460	ENSGMOG00000008761	cpsf2	100	83.460	Gadus_morhua
ENSECAG00000023935	CPSF2	100	95.402	ENSGALG00000010783	CPSF2	100	95.913	Gallus_gallus
ENSECAG00000023935	CPSF2	100	85.425	ENSGAFG00000001407	cpsf2	100	85.425	Gambusia_affinis
ENSECAG00000023935	CPSF2	100	84.537	ENSGACG00000008418	cpsf2	100	84.537	Gasterosteus_aculeatus
ENSECAG00000023935	CPSF2	100	96.424	ENSGAGG00000008287	CPSF2	100	96.424	Gopherus_agassizii
ENSECAG00000023935	CPSF2	100	99.488	ENSGGOG00000011799	CPSF2	100	99.488	Gorilla_gorilla
ENSECAG00000023935	CPSF2	100	85.171	ENSHBUG00000023466	cpsf2	100	85.171	Haplochromis_burtoni
ENSECAG00000023935	CPSF2	100	99.488	ENSHGLG00000018311	CPSF2	100	99.488	Heterocephalus_glaber_female
ENSECAG00000023935	CPSF2	100	99.488	ENSHGLG00100016460	CPSF2	100	99.488	Heterocephalus_glaber_male
ENSECAG00000023935	CPSF2	100	84.537	ENSHCOG00000019527	cpsf2	98	84.537	Hippocampus_comes
ENSECAG00000023935	CPSF2	100	85.642	ENSIPUG00000020857	cpsf2	100	85.642	Ictalurus_punctatus
ENSECAG00000023935	CPSF2	100	99.616	ENSSTOG00000009528	CPSF2	100	99.616	Ictidomys_tridecemlineatus
ENSECAG00000023935	CPSF2	100	99.233	ENSJJAG00000017925	Cpsf2	100	99.233	Jaculus_jaculus
ENSECAG00000023935	CPSF2	100	84.664	ENSKMAG00000019429	cpsf2	100	84.664	Kryptolebias_marmoratus
ENSECAG00000023935	CPSF2	95	84.070	ENSLBEG00000011585	cpsf2	100	84.225	Labrus_bergylta
ENSECAG00000023935	CPSF2	100	89.527	ENSLACG00000019024	CPSF2	100	90.038	Latimeria_chalumnae
ENSECAG00000023935	CPSF2	100	87.452	ENSLOCG00000014102	cpsf2	100	87.452	Lepisosteus_oculatus
ENSECAG00000023935	CPSF2	100	99.235	ENSLAFG00000004891	CPSF2	100	99.235	Loxodonta_africana
ENSECAG00000023935	CPSF2	100	99.616	ENSMFAG00000041212	CPSF2	100	99.616	Macaca_fascicularis
ENSECAG00000023935	CPSF2	100	99.616	ENSMMUG00000000699	CPSF2	100	99.616	Macaca_mulatta
ENSECAG00000023935	CPSF2	100	99.616	ENSMNEG00000031584	CPSF2	100	99.616	Macaca_nemestrina
ENSECAG00000023935	CPSF2	100	99.616	ENSMLEG00000029394	CPSF2	100	99.616	Mandrillus_leucophaeus
ENSECAG00000023935	CPSF2	100	85.805	ENSMAMG00000004235	cpsf2	100	85.805	Mastacembelus_armatus
ENSECAG00000023935	CPSF2	100	85.298	ENSMZEG00005001769	cpsf2	100	85.298	Maylandia_zebra
ENSECAG00000023935	CPSF2	100	95.408	ENSMGAG00000013122	CPSF2	100	95.918	Meleagris_gallopavo
ENSECAG00000023935	CPSF2	100	98.465	ENSMAUG00000015160	Cpsf2	100	98.465	Mesocricetus_auratus
ENSECAG00000023935	CPSF2	100	99.488	ENSMICG00000016441	CPSF2	100	99.488	Microcebus_murinus
ENSECAG00000023935	CPSF2	100	98.465	ENSMOCG00000015372	Cpsf2	100	98.465	Microtus_ochrogaster
ENSECAG00000023935	CPSF2	100	81.115	ENSMMOG00000015590	cpsf2	100	81.115	Mola_mola
ENSECAG00000023935	CPSF2	100	98.849	ENSMODG00000002042	CPSF2	100	98.849	Monodelphis_domestica
ENSECAG00000023935	CPSF2	100	82.636	ENSMALG00000022275	cpsf2	100	82.636	Monopterus_albus
ENSECAG00000023935	CPSF2	100	98.082	ENSMUSG00000041781	Cpsf2	100	98.082	Mus_musculus
ENSECAG00000023935	CPSF2	100	98.210	MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	Mus_pahari
ENSECAG00000023935	CPSF2	100	98.082	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	Mus_spretus
ENSECAG00000023935	CPSF2	100	99.616	ENSMPUG00000007617	CPSF2	98	99.616	Mustela_putorius_furo
ENSECAG00000023935	CPSF2	100	98.849	ENSMLUG00000005570	CPSF2	100	98.849	Myotis_lucifugus
ENSECAG00000023935	CPSF2	100	98.977	ENSNGAG00000020312	Cpsf2	100	98.977	Nannospalax_galili
ENSECAG00000023935	CPSF2	100	85.678	ENSNBRG00000022402	cpsf2	100	85.678	Neolamprologus_brichardi
ENSECAG00000023935	CPSF2	100	98.593	ENSNLEG00000017132	CPSF2	100	98.593	Nomascus_leucogenys
ENSECAG00000023935	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSECAG00000023935	CPSF2	94	91.803	ENSOPRG00000008484	-	100	91.803	Ochotona_princeps
ENSECAG00000023935	CPSF2	100	99.361	ENSODEG00000008682	CPSF2	100	99.361	Octodon_degus
ENSECAG00000023935	CPSF2	100	86.058	ENSONIG00000005901	cpsf2	100	86.058	Oreochromis_niloticus
ENSECAG00000023935	CPSF2	100	98.721	ENSOANG00000003822	CPSF2	100	98.721	Ornithorhynchus_anatinus
ENSECAG00000023935	CPSF2	100	99.233	ENSOCUG00000005713	CPSF2	100	99.233	Oryctolagus_cuniculus
ENSECAG00000023935	CPSF2	100	79.975	ENSORLG00000011628	cpsf2	100	79.975	Oryzias_latipes
ENSECAG00000023935	CPSF2	100	84.791	ENSORLG00020016980	cpsf2	100	84.791	Oryzias_latipes_hni
ENSECAG00000023935	CPSF2	100	84.791	ENSORLG00015011910	cpsf2	100	84.791	Oryzias_latipes_hsok
ENSECAG00000023935	CPSF2	100	84.030	ENSOMEG00000022876	cpsf2	100	84.030	Oryzias_melastigma
ENSECAG00000023935	CPSF2	100	96.429	ENSOARG00000012889	CPSF2	100	96.429	Ovis_aries
ENSECAG00000023935	CPSF2	100	99.488	ENSPPAG00000039666	CPSF2	100	99.488	Pan_paniscus
ENSECAG00000023935	CPSF2	99	99.744	ENSPPRG00000010869	CPSF2	100	99.744	Panthera_pardus
ENSECAG00000023935	CPSF2	100	99.744	ENSPTIG00000021202	CPSF2	100	99.744	Panthera_tigris_altaica
ENSECAG00000023935	CPSF2	100	99.488	ENSPTRG00000006651	CPSF2	100	99.488	Pan_troglodytes
ENSECAG00000023935	CPSF2	100	99.616	ENSPANG00000017417	CPSF2	100	99.616	Papio_anubis
ENSECAG00000023935	CPSF2	100	82.084	ENSPKIG00000021453	cpsf2	100	82.084	Paramormyrops_kingsleyae
ENSECAG00000023935	CPSF2	100	95.913	ENSPSIG00000006289	CPSF2	100	95.913	Pelodiscus_sinensis
ENSECAG00000023935	CPSF2	76	79.568	ENSPMGG00000002511	cpsf2	100	79.734	Periophthalmus_magnuspinnatus
ENSECAG00000023935	CPSF2	100	98.721	ENSPEMG00000007917	Cpsf2	100	98.721	Peromyscus_maniculatus_bairdii
ENSECAG00000023935	CPSF2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSECAG00000023935	CPSF2	100	98.849	ENSPCIG00000011393	CPSF2	100	98.849	Phascolarctos_cinereus
ENSECAG00000023935	CPSF2	100	85.298	ENSPFOG00000018648	cpsf2	100	85.298	Poecilia_formosa
ENSECAG00000023935	CPSF2	100	85.298	ENSPLAG00000019199	cpsf2	99	85.298	Poecilia_latipinna
ENSECAG00000023935	CPSF2	96	85.658	ENSPMEG00000012100	cpsf2	100	85.027	Poecilia_mexicana
ENSECAG00000023935	CPSF2	100	85.171	ENSPREG00000008960	cpsf2	100	85.171	Poecilia_reticulata
ENSECAG00000023935	CPSF2	63	99.194	ENSPPYG00000029685	-	100	99.194	Pongo_abelii
ENSECAG00000023935	CPSF2	100	99.105	ENSPCAG00000012477	CPSF2	100	99.105	Procavia_capensis
ENSECAG00000023935	CPSF2	100	99.488	ENSPCOG00000026387	CPSF2	100	99.488	Propithecus_coquereli
ENSECAG00000023935	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSECAG00000023935	CPSF2	100	85.316	ENSPNYG00000023356	cpsf2	100	85.316	Pundamilia_nyererei
ENSECAG00000023935	CPSF2	100	86.785	ENSPNAG00000001849	cpsf2	100	86.785	Pygocentrus_nattereri
ENSECAG00000023935	CPSF2	100	98.338	ENSRNOG00000005733	Cpsf2	100	98.338	Rattus_norvegicus
ENSECAG00000023935	CPSF2	100	99.616	ENSRBIG00000044792	CPSF2	100	99.616	Rhinopithecus_bieti
ENSECAG00000023935	CPSF2	100	99.616	ENSRROG00000034875	CPSF2	100	99.616	Rhinopithecus_roxellana
ENSECAG00000023935	CPSF2	100	99.488	ENSSBOG00000024571	CPSF2	100	99.488	Saimiri_boliviensis_boliviensis
ENSECAG00000023935	CPSF2	100	98.977	ENSSHAG00000010458	CPSF2	100	98.977	Sarcophilus_harrisii
ENSECAG00000023935	CPSF2	100	87.166	ENSSFOG00015002117	cpsf2	100	87.166	Scleropages_formosus
ENSECAG00000023935	CPSF2	100	84.030	ENSSMAG00000002001	cpsf2	100	84.030	Scophthalmus_maximus
ENSECAG00000023935	CPSF2	100	86.185	ENSSDUG00000004084	cpsf2	100	86.185	Seriola_dumerili
ENSECAG00000023935	CPSF2	100	85.678	ENSSLDG00000024330	cpsf2	100	85.678	Seriola_lalandi_dorsalis
ENSECAG00000023935	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSECAG00000023935	CPSF2	100	95.658	ENSSPUG00000013485	CPSF2	100	95.658	Sphenodon_punctatus
ENSECAG00000023935	CPSF2	100	85.171	ENSSPAG00000013284	cpsf2	100	85.171	Stegastes_partitus
ENSECAG00000023935	CPSF2	100	99.488	ENSSSCG00000002447	CPSF2	100	99.488	Sus_scrofa
ENSECAG00000023935	CPSF2	100	96.296	ENSTGUG00000012571	-	100	96.296	Taeniopygia_guttata
ENSECAG00000023935	CPSF2	100	84.537	ENSTRUG00000003742	cpsf2	100	84.537	Takifugu_rubripes
ENSECAG00000023935	CPSF2	100	83.439	ENSTNIG00000012228	cpsf2	100	84.197	Tetraodon_nigroviridis
ENSECAG00000023935	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSECAG00000023935	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSECAG00000023935	CPSF2	100	99.744	ENSUAMG00000028071	CPSF2	100	99.744	Ursus_americanus
ENSECAG00000023935	CPSF2	100	99.744	ENSUMAG00000005029	CPSF2	100	99.744	Ursus_maritimus
ENSECAG00000023935	CPSF2	99	99.616	ENSVPAG00000003503	CPSF2	100	99.616	Vicugna_pacos
ENSECAG00000023935	CPSF2	100	99.616	ENSVVUG00000024642	CPSF2	100	99.616	Vulpes_vulpes
ENSECAG00000023935	CPSF2	100	91.954	ENSXETG00000010289	cpsf2	100	91.954	Xenopus_tropicalis
ENSECAG00000023935	CPSF2	100	85.678	ENSXCOG00000001764	cpsf2	100	85.678	Xiphophorus_couchianus
ENSECAG00000023935	CPSF2	100	85.805	ENSXMAG00000017048	cpsf2	100	85.805	Xiphophorus_maculatus