EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000023954 (Gene tree)
Gene ID: 100059254
Gene Symbol: SETDB1
Alias: -
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 35510 bases
Position: chr5:42887065-42922574
Accession: 22879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000021483	MBD	PF01429.19	2.4e-12	1	1
ENSECAP00000032473	MBD	PF01429.19	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000063078	-	4216	XM_005610162	ENSECAP00000032473	1299 (aa)	XP_005610219	UPI0003ACC107
ENSECAT00000025804	-	4153	-	ENSECAP00000021483	1278 (aa)	-	F6YYF6

Gene Model

Click here to download ENSECAG00000023954's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb00310	Lysine degradation	KEGG
ecb04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000023954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000023954	SETDB1	100	96.690	ENSG00000143379	SETDB1	100	96.933	Homo_sapiens
ENSECAG00000023954	SETDB1	92	62.857	ENSAPOG00000016228	setdb1b	99	68.280	Acanthochromis_polyacanthus
ENSECAG00000023954	SETDB1	100	96.327	ENSAMEG00000001160	SETDB1	100	96.327	Ailuropoda_melanoleuca
ENSECAG00000023954	SETDB1	92	70.109	ENSACIG00000007359	setdb1b	99	70.109	Amphilophus_citrinellus
ENSECAG00000023954	SETDB1	89	67.010	ENSAOCG00000005586	setdb1b	99	67.010	Amphiprion_ocellaris
ENSECAG00000023954	SETDB1	92	62.100	ENSATEG00000023520	setdb1b	99	68.817	Anabas_testudineus
ENSECAG00000023954	SETDB1	99	76.659	ENSAPLG00000013908	SETDB1	100	76.354	Anas_platyrhynchos
ENSECAG00000023954	SETDB1	100	97.306	ENSANAG00000001819	SETDB1	100	97.306	Aotus_nancymaae
ENSECAG00000023954	SETDB1	88	69.730	ENSACLG00000020489	setdb1b	98	70.270	Astatotilapia_calliptera
ENSECAG00000023954	SETDB1	53	66.165	ENSAMXG00000010030	setdb1a	67	66.165	Astyanax_mexicanus
ENSECAG00000023954	SETDB1	90	59.532	ENSAMXG00000016168	setdb1b	81	74.286	Astyanax_mexicanus
ENSECAG00000023954	SETDB1	100	96.613	ENSBTAG00000000098	SETDB1	100	96.613	Bos_taurus
ENSECAG00000023954	SETDB1	100	96.844	ENSCJAG00000006972	SETDB1	100	96.844	Callithrix_jacchus
ENSECAG00000023954	SETDB1	100	96.544	ENSCAFG00000023501	SETDB1	100	96.544	Canis_familiaris
ENSECAG00000023954	SETDB1	100	96.621	ENSCAFG00020013596	SETDB1	100	96.621	Canis_lupus_dingo
ENSECAG00000023954	SETDB1	100	96.690	ENSCHIG00000010698	SETDB1	100	96.690	Capra_hircus
ENSECAG00000023954	SETDB1	82	94.006	ENSTSYG00000012646	SETDB1	100	93.815	Carlito_syrichta
ENSECAG00000023954	SETDB1	81	94.355	ENSCAPG00000013619	SETDB1	100	93.254	Cavia_aperea
ENSECAG00000023954	SETDB1	100	94.919	ENSCPOG00000001632	SETDB1	100	94.842	Cavia_porcellus
ENSECAG00000023954	SETDB1	100	96.921	ENSCCAG00000024882	SETDB1	100	96.921	Cebus_capucinus
ENSECAG00000023954	SETDB1	100	93.154	ENSCATG00000044888	SETDB1	100	93.154	Cercocebus_atys
ENSECAG00000023954	SETDB1	100	94.943	ENSCLAG00000000242	SETDB1	100	95.096	Chinchilla_lanigera
ENSECAG00000023954	SETDB1	88	96.859	ENSCSAG00000018034	SETDB1	100	96.859	Chlorocebus_sabaeus
ENSECAG00000023954	SETDB1	100	86.374	ENSCHOG00000004013	SETDB1	100	86.374	Choloepus_hoffmanni
ENSECAG00000023954	SETDB1	99	78.723	ENSCPBG00000008716	SETDB1	100	78.495	Chrysemys_picta_bellii
ENSECAG00000023954	SETDB1	86	97.301	ENSCANG00000036388	SETDB1	95	97.301	Colobus_angolensis_palliatus
ENSECAG00000023954	SETDB1	100	91.840	ENSCGRG00001010822	Setdb1	100	91.609	Cricetulus_griseus_chok1gshd
ENSECAG00000023954	SETDB1	100	91.532	ENSCGRG00000005953	Setdb1	100	91.301	Cricetulus_griseus_crigri
ENSECAG00000023954	SETDB1	89	63.415	ENSCSEG00000002988	setdb1b	98	69.189	Cynoglossus_semilaevis
ENSECAG00000023954	SETDB1	90	69.110	ENSCVAG00000008877	setdb1b	99	69.110	Cyprinodon_variegatus
ENSECAG00000023954	SETDB1	94	57.488	ENSDARG00000099021	setdb1b	99	55.970	Danio_rerio
ENSECAG00000023954	SETDB1	100	96.325	ENSDNOG00000007754	SETDB1	100	96.325	Dasypus_novemcinctus
ENSECAG00000023954	SETDB1	100	92.473	ENSDORG00000006830	Setdb1	100	92.550	Dipodomys_ordii
ENSECAG00000023954	SETDB1	71	46.450	ENSEBUG00000005735	setdb1b	95	46.411	Eptatretus_burgeri
ENSECAG00000023954	SETDB1	100	99.769	ENSEASG00005002061	SETDB1	100	99.769	Equus_asinus_asinus
ENSECAG00000023954	SETDB1	83	97.059	ENSEEUG00000015825	SETDB1	83	97.059	Erinaceus_europaeus
ENSECAG00000023954	SETDB1	62	81.944	ENSELUG00000006204	-	70	81.944	Esox_lucius
ENSECAG00000023954	SETDB1	88	76.331	ENSELUG00000013948	setdb1b	98	76.331	Esox_lucius
ENSECAG00000023954	SETDB1	100	94.842	ENSFCAG00000009655	SETDB1	100	94.842	Felis_catus
ENSECAG00000023954	SETDB1	100	95.077	ENSFDAG00000021515	SETDB1	100	95.000	Fukomys_damarensis
ENSECAG00000023954	SETDB1	90	67.368	ENSFHEG00000022195	setdb1b	99	69.110	Fundulus_heteroclitus
ENSECAG00000023954	SETDB1	87	78.235	ENSGMOG00000005993	setdb1b	93	78.235	Gadus_morhua
ENSECAG00000023954	SETDB1	99	74.465	ENSGALG00000024051	SETDB1	92	73.338	Gallus_gallus
ENSECAG00000023954	SETDB1	92	60.667	ENSGAFG00000012805	setdb1b	98	61.333	Gambusia_affinis
ENSECAG00000023954	SETDB1	87	72.674	ENSGACG00000011675	setdb1b	93	73.837	Gasterosteus_aculeatus
ENSECAG00000023954	SETDB1	99	78.875	ENSGAGG00000005348	SETDB1	100	78.723	Gopherus_agassizii
ENSECAG00000023954	SETDB1	100	96.921	ENSGGOG00000016308	SETDB1	100	96.921	Gorilla_gorilla
ENSECAG00000023954	SETDB1	88	69.730	ENSHBUG00000004618	setdb1b	98	70.270	Haplochromis_burtoni
ENSECAG00000023954	SETDB1	100	95.150	ENSHGLG00000011098	SETDB1	100	95.150	Heterocephalus_glaber_female
ENSECAG00000023954	SETDB1	100	94.226	ENSHGLG00100009789	SETDB1	100	94.226	Heterocephalus_glaber_male
ENSECAG00000023954	SETDB1	90	68.108	ENSHCOG00000014567	setdb1b	98	68.649	Hippocampus_comes
ENSECAG00000023954	SETDB1	87	72.989	ENSIPUG00000004536	setdb1	98	72.989	Ictalurus_punctatus
ENSECAG00000023954	SETDB1	100	94.533	ENSSTOG00000006770	SETDB1	100	94.913	Ictidomys_tridecemlineatus
ENSECAG00000023954	SETDB1	89	67.368	ENSKMAG00000001197	setdb1b	99	67.895	Kryptolebias_marmoratus
ENSECAG00000023954	SETDB1	88	67.027	ENSLBEG00000025862	setdb1b	96	67.568	Labrus_bergylta
ENSECAG00000023954	SETDB1	99	69.683	ENSLACG00000011159	SETDB1	100	69.683	Latimeria_chalumnae
ENSECAG00000023954	SETDB1	100	94.673	ENSLAFG00000004006	SETDB1	100	94.673	Loxodonta_africana
ENSECAG00000023954	SETDB1	100	96.690	ENSMFAG00000042328	SETDB1	100	96.690	Macaca_fascicularis
ENSECAG00000023954	SETDB1	100	96.767	ENSMMUG00000023235	SETDB1	100	96.767	Macaca_mulatta
ENSECAG00000023954	SETDB1	100	96.613	ENSMNEG00000017223	SETDB1	100	96.613	Macaca_nemestrina
ENSECAG00000023954	SETDB1	100	96.690	ENSMLEG00000033050	SETDB1	100	96.690	Mandrillus_leucophaeus
ENSECAG00000023954	SETDB1	92	68.889	ENSMAMG00000015176	setdb1b	85	69.444	Mastacembelus_armatus
ENSECAG00000023954	SETDB1	88	69.730	ENSMZEG00005016099	setdb1b	98	70.270	Maylandia_zebra
ENSECAG00000023954	SETDB1	88	71.755	ENSMGAG00000001018	SETDB1	97	70.940	Meleagris_gallopavo
ENSECAG00000023954	SETDB1	88	93.478	ENSMAUG00000021391	Setdb1	100	93.478	Mesocricetus_auratus
ENSECAG00000023954	SETDB1	100	96.316	ENSMICG00000000425	SETDB1	100	96.316	Microcebus_murinus
ENSECAG00000023954	SETDB1	100	91.138	ENSMOCG00000017407	Setdb1	100	91.215	Microtus_ochrogaster
ENSECAG00000023954	SETDB1	89	64.706	ENSMMOG00000016162	setdb1b	99	69.189	Mola_mola
ENSECAG00000023954	SETDB1	99	88.304	ENSMODG00000018821	SETDB1	90	87.994	Monodelphis_domestica
ENSECAG00000023954	SETDB1	88	72.941	ENSMALG00000007801	setdb1b	98	75.460	Monopterus_albus
ENSECAG00000023954	SETDB1	100	91.820	MGP_CAROLIEiJ_G0025342	Setdb1	100	91.514	Mus_caroli
ENSECAG00000023954	SETDB1	100	91.076	ENSMUSG00000015697	Setdb1	100	90.999	Mus_musculus
ENSECAG00000023954	SETDB1	100	91.945	ENSMPUG00000004298	SETDB1	100	91.945	Mustela_putorius_furo
ENSECAG00000023954	SETDB1	100	93.475	ENSMLUG00000010486	SETDB1	100	93.323	Myotis_lucifugus
ENSECAG00000023954	SETDB1	100	91.378	ENSNGAG00000020151	Setdb1	100	91.455	Nannospalax_galili
ENSECAG00000023954	SETDB1	88	70.270	ENSNBRG00000003147	setdb1b	99	70.811	Neolamprologus_brichardi
ENSECAG00000023954	SETDB1	100	93.313	ENSNLEG00000009996	SETDB1	100	93.313	Nomascus_leucogenys
ENSECAG00000023954	SETDB1	87	90.188	ENSMEUG00000006544	-	87	90.148	Notamacropus_eugenii
ENSECAG00000023954	SETDB1	100	80.123	ENSMEUG00000000555	-	100	79.739	Notamacropus_eugenii
ENSECAG00000023954	SETDB1	99	92.387	ENSOPRG00000015349	SETDB1	100	92.546	Ochotona_princeps
ENSECAG00000023954	SETDB1	100	95.458	ENSODEG00000012471	SETDB1	100	95.458	Octodon_degus
ENSECAG00000023954	SETDB1	88	69.189	ENSONIG00000006454	setdb1b	98	70.270	Oreochromis_niloticus
ENSECAG00000023954	SETDB1	100	94.688	ENSOCUG00000003642	SETDB1	100	94.842	Oryctolagus_cuniculus
ENSECAG00000023954	SETDB1	95	65.842	ENSORLG00000010602	setdb1b	98	68.041	Oryzias_latipes
ENSECAG00000023954	SETDB1	95	64.251	ENSORLG00015014543	setdb1b	98	66.332	Oryzias_latipes_hsok
ENSECAG00000023954	SETDB1	95	66.169	ENSOMEG00000009457	setdb1b	98	69.271	Oryzias_melastigma
ENSECAG00000023954	SETDB1	100	89.538	ENSOGAG00000010320	SETDB1	100	89.462	Otolemur_garnettii
ENSECAG00000023954	SETDB1	100	96.319	ENSOARG00000020880	SETDB1	100	96.319	Ovis_aries
ENSECAG00000023954	SETDB1	100	96.613	ENSPPAG00000041015	SETDB1	100	96.613	Pan_paniscus
ENSECAG00000023954	SETDB1	100	96.459	ENSPPRG00000005462	SETDB1	100	96.459	Panthera_pardus
ENSECAG00000023954	SETDB1	100	95.689	ENSPTIG00000014233	SETDB1	100	95.689	Panthera_tigris_altaica
ENSECAG00000023954	SETDB1	100	96.613	ENSPTRG00000001267	SETDB1	100	96.613	Pan_troglodytes
ENSECAG00000023954	SETDB1	100	94.303	ENSPANG00000020214	SETDB1	100	94.303	Papio_anubis
ENSECAG00000023954	SETDB1	98	57.278	ENSPKIG00000010963	setdb1b	100	55.588	Paramormyrops_kingsleyae
ENSECAG00000023954	SETDB1	56	79.838	ENSPSIG00000008407	SETDB1	85	79.161	Pelodiscus_sinensis
ENSECAG00000023954	SETDB1	93	92.663	ENSPEMG00000010553	Setdb1	100	92.415	Peromyscus_maniculatus_bairdii
ENSECAG00000023954	SETDB1	98	51.740	ENSPMAG00000001573	setdb1b	100	50.962	Petromyzon_marinus
ENSECAG00000023954	SETDB1	99	57.025	ENSPFOG00000004623	-	99	56.659	Poecilia_formosa
ENSECAG00000023954	SETDB1	99	54.960	ENSPFOG00000004429	setdb1b	97	70.270	Poecilia_formosa
ENSECAG00000023954	SETDB1	91	61.333	ENSPLAG00000017117	setdb1b	98	62.667	Poecilia_latipinna
ENSECAG00000023954	SETDB1	93	68.085	ENSPLAG00000019076	-	99	69.149	Poecilia_latipinna
ENSECAG00000023954	SETDB1	93	68.085	ENSPMEG00000006468	setdb1b	98	69.149	Poecilia_mexicana
ENSECAG00000023954	SETDB1	93	68.085	ENSPREG00000017459	setdb1b	98	68.617	Poecilia_reticulata
ENSECAG00000023954	SETDB1	100	96.613	ENSPPYG00000000887	SETDB1	100	96.613	Pongo_abelii
ENSECAG00000023954	SETDB1	86	94.389	ENSPCAG00000002527	SETDB1	100	94.389	Procavia_capensis
ENSECAG00000023954	SETDB1	100	96.690	ENSPCOG00000027869	SETDB1	100	96.690	Propithecus_coquereli
ENSECAG00000023954	SETDB1	94	93.615	ENSPVAG00000004355	SETDB1	93	93.615	Pteropus_vampyrus
ENSECAG00000023954	SETDB1	89	69.730	ENSPNYG00000003997	setdb1b	90	70.270	Pundamilia_nyererei
ENSECAG00000023954	SETDB1	100	91.418	ENSRNOG00000021143	Setdb1	100	91.264	Rattus_norvegicus
ENSECAG00000023954	SETDB1	100	96.767	ENSRBIG00000042359	SETDB1	100	96.767	Rhinopithecus_bieti
ENSECAG00000023954	SETDB1	100	96.921	ENSRROG00000032628	SETDB1	100	96.921	Rhinopithecus_roxellana
ENSECAG00000023954	SETDB1	100	97.383	ENSSBOG00000028608	SETDB1	100	97.383	Saimiri_boliviensis_boliviensis
ENSECAG00000023954	SETDB1	100	87.241	ENSSHAG00000012701	SETDB1	100	87.144	Sarcophilus_harrisii
ENSECAG00000023954	SETDB1	87	69.849	ENSSFOG00015022183	setdb1	96	76.571	Scleropages_formosus
ENSECAG00000023954	SETDB1	54	61.468	ENSSMAG00000015398	setdb1b	99	65.672	Scophthalmus_maximus
ENSECAG00000023954	SETDB1	92	64.929	ENSSDUG00000007513	setdb1b	99	68.750	Seriola_dumerili
ENSECAG00000023954	SETDB1	56	64.929	ENSSLDG00000015209	setdb1b	99	69.072	Seriola_lalandi_dorsalis
ENSECAG00000023954	SETDB1	99	76.816	ENSSPUG00000002969	SETDB1	100	75.790	Sphenodon_punctatus
ENSECAG00000023954	SETDB1	100	95.926	ENSSSCG00000006645	SETDB1	100	95.926	Sus_scrofa
ENSECAG00000023954	SETDB1	94	73.586	ENSTGUG00000004684	SETDB1	100	72.742	Taeniopygia_guttata
ENSECAG00000023954	SETDB1	88	66.845	ENSTRUG00000014641	setdb1b	97	66.845	Takifugu_rubripes
ENSECAG00000023954	SETDB1	99	54.422	ENSTNIG00000008065	setdb1b	99	55.437	Tetraodon_nigroviridis
ENSECAG00000023954	SETDB1	93	96.515	ENSTBEG00000009306	SETDB1	100	96.515	Tupaia_belangeri
ENSECAG00000023954	SETDB1	89	95.333	ENSTTRG00000006966	SETDB1	89	95.333	Tursiops_truncatus
ENSECAG00000023954	SETDB1	100	96.475	ENSUAMG00000026724	SETDB1	100	96.475	Ursus_americanus
ENSECAG00000023954	SETDB1	100	91.629	ENSUMAG00000003141	SETDB1	100	91.779	Ursus_maritimus
ENSECAG00000023954	SETDB1	76	97.384	ENSVPAG00000005440	SETDB1	78	97.384	Vicugna_pacos
ENSECAG00000023954	SETDB1	100	96.390	ENSVVUG00000011637	SETDB1	100	96.390	Vulpes_vulpes
ENSECAG00000023954	SETDB1	99	69.924	ENSXETG00000008936	setdb1	99	69.202	Xenopus_tropicalis
ENSECAG00000023954	SETDB1	98	55.633	ENSXCOG00000019497	setdb1b	90	72.881	Xiphophorus_couchianus
ENSECAG00000023954	SETDB1	90	68.085	ENSXMAG00000016600	setdb1b	99	68.617	Xiphophorus_maculatus