EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000024039 (Gene tree)
Gene ID: 100051719
Gene Symbol: HFM1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 101847 bases
Position: chr5:70111279-70213125
Accession: 18767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000021680	ResIII	PF04851.15	2.3e-11	1	1
ENSECAP00000021680	DEAD	PF00270.29	1.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000026025	-	4505	-	ENSECAP00000021680	1480 (aa)	XP_023497444	F6WRW2

Gene Model

Click here to download ENSECAG00000024039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000024039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000024039	HFM1	54	35.049	ENSECAG00000019675	SNRNP200	75	31.707
ENSECAG00000024039	HFM1	50	37.031	ENSECAG00000012013	ASCC3	65	35.215

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000024039	HFM1	100	84.983	ENSG00000162669	HFM1	100	84.983	Homo_sapiens
ENSECAG00000024039	HFM1	57	65.640	ENSAPOG00000005304	hfm1	95	65.640	Acanthochromis_polyacanthus
ENSECAG00000024039	HFM1	100	86.734	ENSAMEG00000000432	HFM1	100	86.734	Ailuropoda_melanoleuca
ENSECAG00000024039	HFM1	72	58.653	ENSACIG00000021553	hfm1	92	58.653	Amphilophus_citrinellus
ENSECAG00000024039	HFM1	57	66.033	ENSAOCG00000022839	hfm1	96	68.852	Amphiprion_ocellaris
ENSECAG00000024039	HFM1	57	65.796	ENSAPEG00000014316	hfm1	96	69.027	Amphiprion_percula
ENSECAG00000024039	HFM1	82	54.603	ENSATEG00000019181	hfm1	99	54.603	Anabas_testudineus
ENSECAG00000024039	HFM1	100	59.254	ENSAPLG00000013639	HFM1	100	59.254	Anas_platyrhynchos
ENSECAG00000024039	HFM1	100	81.708	ENSANAG00000029513	HFM1	100	81.708	Aotus_nancymaae
ENSECAG00000024039	HFM1	63	63.451	ENSACLG00000009033	hfm1	97	64.720	Astatotilapia_calliptera
ENSECAG00000024039	HFM1	83	55.751	ENSAMXG00000006108	hfm1	92	52.928	Astyanax_mexicanus
ENSECAG00000024039	HFM1	100	85.253	ENSBTAG00000020856	HFM1	100	85.253	Bos_taurus
ENSECAG00000024039	HFM1	100	82.963	ENSCJAG00000001843	HFM1	100	82.963	Callithrix_jacchus
ENSECAG00000024039	HFM1	99	88.139	ENSCAFG00000020187	HFM1	99	88.139	Canis_familiaris
ENSECAG00000024039	HFM1	100	82.840	ENSTSYG00000014250	HFM1	100	82.840	Carlito_syrichta
ENSECAG00000024039	HFM1	99	76.617	ENSCPOG00000007421	HFM1	99	76.617	Cavia_porcellus
ENSECAG00000024039	HFM1	100	82.896	ENSCCAG00000033206	HFM1	100	82.896	Cebus_capucinus
ENSECAG00000024039	HFM1	100	84.175	ENSCATG00000030987	HFM1	100	84.175	Cercocebus_atys
ENSECAG00000024039	HFM1	100	83.030	ENSCLAG00000005173	HFM1	99	83.030	Chinchilla_lanigera
ENSECAG00000024039	HFM1	61	93.421	ENSCHOG00000011824	-	71	93.421	Choloepus_hoffmanni
ENSECAG00000024039	HFM1	100	70.950	ENSCGRG00001016995	Hfm1	100	70.950	Cricetulus_griseus_chok1gshd
ENSECAG00000024039	HFM1	100	75.168	ENSCGRG00000017181	Hfm1	100	75.168	Cricetulus_griseus_crigri
ENSECAG00000024039	HFM1	63	63.141	ENSCSEG00000017659	hfm1	87	63.646	Cynoglossus_semilaevis
ENSECAG00000024039	HFM1	74	56.040	ENSDARG00000104288	hfm1	96	56.040	Danio_rerio
ENSECAG00000024039	HFM1	100	84.781	ENSDNOG00000004776	HFM1	100	84.781	Dasypus_novemcinctus
ENSECAG00000024039	HFM1	100	75.766	ENSDORG00000014661	Hfm1	100	75.766	Dipodomys_ordii
ENSECAG00000024039	HFM1	71	91.202	ENSEASG00005015424	HFM1	98	97.812	Equus_asinus_asinus
ENSECAG00000024039	HFM1	61	67.473	ENSELUG00000018944	hfm1	97	67.473	Esox_lucius
ENSECAG00000024039	HFM1	100	86.599	ENSFCAG00000029116	HFM1	100	86.599	Felis_catus
ENSECAG00000024039	HFM1	100	58.983	ENSFALG00000001781	HFM1	100	59.707	Ficedula_albicollis
ENSECAG00000024039	HFM1	100	81.702	ENSFDAG00000020816	HFM1	100	81.702	Fukomys_damarensis
ENSECAG00000024039	HFM1	64	61.435	ENSGMOG00000017436	hfm1	100	61.435	Gadus_morhua
ENSECAG00000024039	HFM1	72	60.150	ENSGAFG00000018093	hfm1	93	66.667	Gambusia_affinis
ENSECAG00000024039	HFM1	64	62.241	ENSGACG00000015686	hfm1	100	62.241	Gasterosteus_aculeatus
ENSECAG00000024039	HFM1	100	84.646	ENSGGOG00000038524	HFM1	100	84.646	Gorilla_gorilla
ENSECAG00000024039	HFM1	63	64.630	ENSHBUG00000007309	hfm1	98	57.895	Haplochromis_burtoni
ENSECAG00000024039	HFM1	55	64.338	ENSHCOG00000019632	hfm1	97	64.338	Hippocampus_comes
ENSECAG00000024039	HFM1	63	66.238	ENSIPUG00000017020	hfm1	92	66.548	Ictalurus_punctatus
ENSECAG00000024039	HFM1	98	80.183	ENSJJAG00000017198	Hfm1	100	80.183	Jaculus_jaculus
ENSECAG00000024039	HFM1	60	62.749	ENSKMAG00000002282	hfm1	91	62.749	Kryptolebias_marmoratus
ENSECAG00000024039	HFM1	63	62.955	ENSLBEG00000006759	hfm1	97	65.521	Labrus_bergylta
ENSECAG00000024039	HFM1	72	66.945	ENSLACG00000010698	HFM1	100	67.038	Latimeria_chalumnae
ENSECAG00000024039	HFM1	72	64.140	ENSLOCG00000004931	hfm1	96	64.233	Lepisosteus_oculatus
ENSECAG00000024039	HFM1	50	91.117	ENSLAFG00000015903	-	99	91.117	Loxodonta_africana
ENSECAG00000024039	HFM1	100	81.342	ENSMFAG00000003649	HFM1	100	81.342	Macaca_fascicularis
ENSECAG00000024039	HFM1	100	83.771	ENSMMUG00000006819	HFM1	100	83.771	Macaca_mulatta
ENSECAG00000024039	HFM1	53	70.218	ENSMAMG00000004623	hfm1	97	66.546	Mastacembelus_armatus
ENSECAG00000024039	HFM1	63	63.451	ENSMZEG00005004679	hfm1	97	64.720	Maylandia_zebra
ENSECAG00000024039	HFM1	53	78.061	ENSMGAG00000008437	HFM1	98	78.061	Meleagris_gallopavo
ENSECAG00000024039	HFM1	100	75.825	ENSMAUG00000018858	Hfm1	100	75.825	Mesocricetus_auratus
ENSECAG00000024039	HFM1	100	83.849	ENSMICG00000037935	HFM1	100	83.849	Microcebus_murinus
ENSECAG00000024039	HFM1	100	73.131	ENSMOCG00000014812	Hfm1	100	73.131	Microtus_ochrogaster
ENSECAG00000024039	HFM1	60	64.126	ENSMMOG00000006148	hfm1	97	64.220	Mola_mola
ENSECAG00000024039	HFM1	63	64.454	ENSMALG00000002401	hfm1	94	67.148	Monopterus_albus
ENSECAG00000024039	HFM1	95	75.320	MGP_CAROLIEiJ_G0027496	Hfm1	100	75.320	Mus_caroli
ENSECAG00000024039	HFM1	100	74.882	ENSMUSG00000043410	Hfm1	100	74.882	Mus_musculus
ENSECAG00000024039	HFM1	100	75.421	MGP_PahariEiJ_G0017268	Hfm1	100	75.421	Mus_pahari
ENSECAG00000024039	HFM1	100	74.613	MGP_SPRETEiJ_G0028495	Hfm1	100	74.613	Mus_spretus
ENSECAG00000024039	HFM1	100	87.618	ENSMPUG00000004594	HFM1	100	87.618	Mustela_putorius_furo
ENSECAG00000024039	HFM1	100	84.175	ENSMLUG00000010200	HFM1	100	84.175	Myotis_lucifugus
ENSECAG00000024039	HFM1	66	58.631	ENSNBRG00000002910	hfm1	97	65.212	Neolamprologus_brichardi
ENSECAG00000024039	HFM1	100	80.671	ENSNLEG00000010285	HFM1	100	80.671	Nomascus_leucogenys
ENSECAG00000024039	HFM1	84	64.311	ENSMEUG00000015788	HFM1	84	64.311	Notamacropus_eugenii
ENSECAG00000024039	HFM1	84	77.720	ENSOPRG00000013916	HFM1	84	77.720	Ochotona_princeps
ENSECAG00000024039	HFM1	67	62.851	ENSONIG00000010590	hfm1	99	59.761	Oreochromis_niloticus
ENSECAG00000024039	HFM1	55	65.191	ENSORLG00000026844	hfm1	99	65.191	Oryzias_latipes
ENSECAG00000024039	HFM1	71	53.471	ENSORLG00020002951	hfm1	96	48.822	Oryzias_latipes_hni
ENSECAG00000024039	HFM1	90	51.248	ENSOMEG00000016474	hfm1	100	48.102	Oryzias_melastigma
ENSECAG00000024039	HFM1	83	87.561	ENSOGAG00000032369	HFM1	100	87.561	Otolemur_garnettii
ENSECAG00000024039	HFM1	100	85.455	ENSOARG00000015812	HFM1	100	85.455	Ovis_aries
ENSECAG00000024039	HFM1	93	86.016	ENSPPAG00000024582	HFM1	100	86.016	Pan_paniscus
ENSECAG00000024039	HFM1	100	86.801	ENSPPRG00000003270	HFM1	100	86.801	Panthera_pardus
ENSECAG00000024039	HFM1	100	86.599	ENSPTIG00000018881	HFM1	100	86.599	Panthera_tigris_altaica
ENSECAG00000024039	HFM1	100	85.051	ENSPTRG00000000948	HFM1	100	85.051	Pan_troglodytes
ENSECAG00000024039	HFM1	100	83.973	ENSPANG00000009838	HFM1	100	83.973	Papio_anubis
ENSECAG00000024039	HFM1	60	68.090	ENSPKIG00000003810	hfm1	95	68.319	Paramormyrops_kingsleyae
ENSECAG00000024039	HFM1	56	65.901	ENSPMGG00000011059	hfm1	100	65.901	Periophthalmus_magnuspinnatus
ENSECAG00000024039	HFM1	100	77.172	ENSPEMG00000022852	Hfm1	100	77.172	Peromyscus_maniculatus_bairdii
ENSECAG00000024039	HFM1	100	69.349	ENSPCIG00000014233	HFM1	100	69.349	Phascolarctos_cinereus
ENSECAG00000024039	HFM1	72	61.639	ENSPFOG00000017194	hfm1	100	61.374	Poecilia_formosa
ENSECAG00000024039	HFM1	72	61.603	ENSPLAG00000000571	hfm1	92	61.603	Poecilia_latipinna
ENSECAG00000024039	HFM1	72	61.603	ENSPMEG00000019475	hfm1	93	61.603	Poecilia_mexicana
ENSECAG00000024039	HFM1	63	66.022	ENSPREG00000007803	hfm1	93	66.026	Poecilia_reticulata
ENSECAG00000024039	HFM1	100	84.579	ENSPPYG00000001163	HFM1	100	84.579	Pongo_abelii
ENSECAG00000024039	HFM1	70	81.614	ENSPCAG00000004289	-	69	81.614	Procavia_capensis
ENSECAG00000024039	HFM1	100	77.306	ENSPVAG00000009713	HFM1	100	77.306	Pteropus_vampyrus
ENSECAG00000024039	HFM1	63	63.344	ENSPNYG00000001795	hfm1	97	64.720	Pundamilia_nyererei
ENSECAG00000024039	HFM1	57	68.155	ENSPNAG00000010865	hfm1	84	68.155	Pygocentrus_nattereri
ENSECAG00000024039	HFM1	100	73.805	ENSRNOG00000023299	Hfm1	100	73.805	Rattus_norvegicus
ENSECAG00000024039	HFM1	100	83.973	ENSRROG00000045569	HFM1	100	83.973	Rhinopithecus_roxellana
ENSECAG00000024039	HFM1	94	86.994	ENSSBOG00000027456	HFM1	99	86.994	Saimiri_boliviensis_boliviensis
ENSECAG00000024039	HFM1	58	72.370	ENSSHAG00000014616	-	98	72.370	Sarcophilus_harrisii
ENSECAG00000024039	HFM1	100	50.998	ENSSFOG00015020129	hfm1	100	51.127	Scleropages_formosus
ENSECAG00000024039	HFM1	60	65.552	ENSSMAG00000006907	hfm1	87	65.184	Scophthalmus_maximus
ENSECAG00000024039	HFM1	56	66.385	ENSSDUG00000011424	hfm1	93	66.385	Seriola_dumerili
ENSECAG00000024039	HFM1	56	66.506	ENSSLDG00000016386	hfm1	92	66.506	Seriola_lalandi_dorsalis
ENSECAG00000024039	HFM1	64	60.274	ENSSPAG00000001023	hfm1	95	66.509	Stegastes_partitus
ENSECAG00000024039	HFM1	100	86.465	ENSSSCG00000006912	HFM1	100	86.465	Sus_scrofa
ENSECAG00000024039	HFM1	64	76.594	ENSTGUG00000006172	HFM1	100	76.594	Taeniopygia_guttata
ENSECAG00000024039	HFM1	100	81.414	ENSTTRG00000013933	HFM1	100	81.414	Tursiops_truncatus
ENSECAG00000024039	HFM1	93	85.246	ENSVPAG00000011331	HFM1	93	85.246	Vicugna_pacos
ENSECAG00000024039	HFM1	71	85.917	ENSVVUG00000020760	HFM1	99	85.917	Vulpes_vulpes
ENSECAG00000024039	HFM1	56	67.110	ENSXMAG00000004178	hfm1	92	67.110	Xiphophorus_maculatus