EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000024040 (Gene tree)
Gene ID: 100057616
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 63222 bases
Position: chr29:33974230-34037451
Accession: 19588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000021539	La	PF05383.17	4.2e-14	1	1
ENSECAP00000044028	La	PF05383.17	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000050230	-	5605	-	ENSECAP00000044028	1752 (aa)	-	-
ENSECAT00000025866	-	3377	-	ENSECAP00000021539	729 (aa)	XP_023487985	F6Y6M1

Gene Model

Click here to download ENSECAG00000024040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000024040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000024040	LARP4B	94	38.421	ENSECAG00000012479	LARP4	99	39.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000024040	LARP4B	100	84.844	ENSG00000107929	LARP4B	100	89.474	Homo_sapiens
ENSECAG00000024040	LARP4B	100	55.222	ENSAPOG00000020531	LARP4B	96	57.098	Acanthochromis_polyacanthus
ENSECAG00000024040	LARP4B	100	90.054	ENSAMEG00000001810	LARP4B	100	90.054	Ailuropoda_melanoleuca
ENSECAG00000024040	LARP4B	93	53.964	ENSAOCG00000007887	-	79	84.106	Amphiprion_ocellaris
ENSECAG00000024040	LARP4B	95	57.625	ENSAPEG00000002512	LARP4B	94	57.238	Amphiprion_percula
ENSECAG00000024040	LARP4B	100	54.907	ENSATEG00000012614	LARP4B	92	56.504	Anabas_testudineus
ENSECAG00000024040	LARP4B	100	75.867	ENSAPLG00000003813	LARP4B	98	75.867	Anas_platyrhynchos
ENSECAG00000024040	LARP4B	100	73.298	ENSACAG00000002858	LARP4B	100	73.298	Anolis_carolinensis
ENSECAG00000024040	LARP4B	100	83.897	ENSANAG00000007531	-	100	83.897	Aotus_nancymaae
ENSECAG00000024040	LARP4B	100	56.533	ENSACLG00000026356	LARP4B	100	56.156	Astatotilapia_calliptera
ENSECAG00000024040	LARP4B	91	52.305	ENSAMXG00000003335	larp4b	92	52.161	Astyanax_mexicanus
ENSECAG00000024040	LARP4B	100	86.821	ENSBTAG00000013899	LARP4B	100	86.821	Bos_taurus
ENSECAG00000024040	LARP4B	100	83.627	ENSCJAG00000018434	LARP4B	100	83.627	Callithrix_jacchus
ENSECAG00000024040	LARP4B	100	91.553	ENSCAFG00020004209	LARP4B	100	91.553	Canis_lupus_dingo
ENSECAG00000024040	LARP4B	100	86.549	ENSCHIG00000013543	LARP4B	100	86.549	Capra_hircus
ENSECAG00000024040	LARP4B	80	87.374	ENSTSYG00000002568	LARP4B	100	87.374	Carlito_syrichta
ENSECAG00000024040	LARP4B	96	76.803	ENSCAPG00000009725	LARP4B	89	81.790	Cavia_aperea
ENSECAG00000024040	LARP4B	100	86.874	ENSCPOG00000009375	LARP4B	100	86.874	Cavia_porcellus
ENSECAG00000024040	LARP4B	100	83.897	ENSCCAG00000024869	LARP4B	100	83.897	Cebus_capucinus
ENSECAG00000024040	LARP4B	100	85.250	ENSCATG00000019750	LARP4B	100	85.250	Cercocebus_atys
ENSECAG00000024040	LARP4B	100	86.351	ENSCLAG00000011570	LARP4B	100	86.351	Chinchilla_lanigera
ENSECAG00000024040	LARP4B	66	88.710	ENSCHOG00000007831	-	66	88.710	Choloepus_hoffmanni
ENSECAG00000024040	LARP4B	100	75.167	ENSCPBG00000017063	LARP4B	100	75.167	Chrysemys_picta_bellii
ENSECAG00000024040	LARP4B	100	83.221	ENSCANG00000038021	LARP4B	100	83.221	Colobus_angolensis_palliatus
ENSECAG00000024040	LARP4B	100	85.695	ENSCGRG00001022930	Larp4b	100	85.695	Cricetulus_griseus_chok1gshd
ENSECAG00000024040	LARP4B	100	85.695	ENSCGRG00000006022	Larp4b	100	85.695	Cricetulus_griseus_crigri
ENSECAG00000024040	LARP4B	100	53.633	ENSCSEG00000007342	LARP4B	100	53.121	Cynoglossus_semilaevis
ENSECAG00000024040	LARP4B	100	54.625	ENSCVAG00000008910	LARP4B	91	57.026	Cyprinodon_variegatus
ENSECAG00000024040	LARP4B	91	52.326	ENSDARG00000062146	larp4b	91	52.616	Danio_rerio
ENSECAG00000024040	LARP4B	93	84.805	ENSDNOG00000045543	-	100	88.306	Dasypus_novemcinctus
ENSECAG00000024040	LARP4B	100	84.189	ENSDORG00000009328	Larp4b	100	84.189	Dipodomys_ordii
ENSECAG00000024040	LARP4B	85	80.000	ENSETEG00000011249	LARP4B	91	80.000	Echinops_telfairi
ENSECAG00000024040	LARP4B	100	99.588	ENSEASG00005019068	-	100	99.588	Equus_asinus_asinus
ENSECAG00000024040	LARP4B	100	84.803	ENSEEUG00000008391	LARP4B	98	84.803	Erinaceus_europaeus
ENSECAG00000024040	LARP4B	100	55.985	ENSELUG00000008626	LARP4B	93	57.718	Esox_lucius
ENSECAG00000024040	LARP4B	89	40.696	ENSELUG00000001417	-	94	40.696	Esox_lucius
ENSECAG00000024040	LARP4B	100	89.266	ENSFCAG00000000721	-	100	89.266	Felis_catus
ENSECAG00000024040	LARP4B	100	74.766	ENSFALG00000006961	LARP4B	100	74.766	Ficedula_albicollis
ENSECAG00000024040	LARP4B	100	86.486	ENSFDAG00000006158	LARP4B	97	86.486	Fukomys_damarensis
ENSECAG00000024040	LARP4B	100	51.492	ENSFHEG00000013037	LARP4B	65	89.916	Fundulus_heteroclitus
ENSECAG00000024040	LARP4B	76	62.687	ENSGMOG00000010818	-	80	67.925	Gadus_morhua
ENSECAG00000024040	LARP4B	100	75.133	ENSGALG00000006672	LARP4B	100	75.133	Gallus_gallus
ENSECAG00000024040	LARP4B	100	57.627	ENSGACG00000017535	LARP4B	98	57.717	Gasterosteus_aculeatus
ENSECAG00000024040	LARP4B	91	77.452	ENSGAGG00000008598	LARP4B	100	77.452	Gopherus_agassizii
ENSECAG00000024040	LARP4B	100	84.709	ENSGGOG00000003572	LARP4B	100	84.709	Gorilla_gorilla
ENSECAG00000024040	LARP4B	100	55.834	ENSHBUG00000007535	LARP4B	100	55.834	Haplochromis_burtoni
ENSECAG00000024040	LARP4B	100	87.062	ENSHGLG00000012936	LARP4B	100	87.062	Heterocephalus_glaber_female
ENSECAG00000024040	LARP4B	88	72.462	ENSHGLG00100017261	-	100	72.308	Heterocephalus_glaber_male
ENSECAG00000024040	LARP4B	100	87.162	ENSHGLG00100016220	-	100	87.162	Heterocephalus_glaber_male
ENSECAG00000024040	LARP4B	99	54.342	ENSHCOG00000011581	LARP4B	80	55.857	Hippocampus_comes
ENSECAG00000024040	LARP4B	92	51.363	ENSIPUG00000009705	larp4b	93	51.220	Ictalurus_punctatus
ENSECAG00000024040	LARP4B	100	84.345	ENSSTOG00000000587	LARP4B	100	84.345	Ictidomys_tridecemlineatus
ENSECAG00000024040	LARP4B	100	85.656	ENSJJAG00000020847	Larp4b	100	85.656	Jaculus_jaculus
ENSECAG00000024040	LARP4B	100	55.486	ENSKMAG00000021674	LARP4B	94	57.784	Kryptolebias_marmoratus
ENSECAG00000024040	LARP4B	80	59.967	ENSLBEG00000025293	-	81	60.458	Labrus_bergylta
ENSECAG00000024040	LARP4B	91	67.054	ENSLACG00000009492	LARP4B	100	67.054	Latimeria_chalumnae
ENSECAG00000024040	LARP4B	100	64.537	ENSLOCG00000012290	larp4b	100	63.291	Lepisosteus_oculatus
ENSECAG00000024040	LARP4B	100	83.984	ENSLAFG00000015334	LARP4B	100	84.006	Loxodonta_africana
ENSECAG00000024040	LARP4B	100	85.250	ENSMFAG00000001766	LARP4B	100	83.085	Macaca_fascicularis
ENSECAG00000024040	LARP4B	100	85.250	ENSMMUG00000005279	LARP4B	100	85.250	Macaca_mulatta
ENSECAG00000024040	LARP4B	100	85.115	ENSMNEG00000014019	LARP4B	100	82.950	Macaca_nemestrina
ENSECAG00000024040	LARP4B	100	85.135	ENSMLEG00000035198	LARP4B	100	85.135	Mandrillus_leucophaeus
ENSECAG00000024040	LARP4B	100	54.658	ENSMAMG00000013742	LARP4B	96	55.145	Mastacembelus_armatus
ENSECAG00000024040	LARP4B	91	56.849	ENSMZEG00005014594	-	100	56.635	Maylandia_zebra
ENSECAG00000024040	LARP4B	80	61.912	ENSMZEG00005006498	-	96	60.674	Maylandia_zebra
ENSECAG00000024040	LARP4B	100	73.965	ENSMGAG00000005472	LARP4B	100	73.965	Meleagris_gallopavo
ENSECAG00000024040	LARP4B	100	85.849	ENSMAUG00000021657	Larp4b	100	85.849	Mesocricetus_auratus
ENSECAG00000024040	LARP4B	100	80.108	ENSMICG00000001301	LARP4B	100	80.108	Microcebus_murinus
ENSECAG00000024040	LARP4B	100	73.641	ENSMOCG00000021452	Larp4b	100	73.777	Microtus_ochrogaster
ENSECAG00000024040	LARP4B	80	59.839	ENSMMOG00000011253	-	89	59.581	Mola_mola
ENSECAG00000024040	LARP4B	100	72.884	ENSMODG00000005957	LARP4B	100	72.884	Monodelphis_domestica
ENSECAG00000024040	LARP4B	100	48.594	ENSMALG00000012432	LARP4B	100	49.468	Monopterus_albus
ENSECAG00000024040	LARP4B	100	86.216	MGP_CAROLIEiJ_G0018216	Larp4b	100	86.351	Mus_caroli
ENSECAG00000024040	LARP4B	100	85.714	ENSMUSG00000033499	Larp4b	100	85.849	Mus_musculus
ENSECAG00000024040	LARP4B	100	86.486	MGP_PahariEiJ_G0019266	Larp4b	100	86.486	Mus_pahari
ENSECAG00000024040	LARP4B	100	85.580	MGP_SPRETEiJ_G0019074	Larp4b	100	85.714	Mus_spretus
ENSECAG00000024040	LARP4B	100	89.237	ENSMPUG00000016220	LARP4B	97	89.237	Mustela_putorius_furo
ENSECAG00000024040	LARP4B	94	86.317	ENSMLUG00000005880	LARP4B	100	86.317	Myotis_lucifugus
ENSECAG00000024040	LARP4B	100	86.062	ENSNGAG00000001750	Larp4b	100	86.062	Nannospalax_galili
ENSECAG00000024040	LARP4B	80	54.457	ENSNBRG00000020018	LARP4B	88	54.295	Neolamprologus_brichardi
ENSECAG00000024040	LARP4B	100	84.709	ENSNLEG00000013442	LARP4B	100	84.709	Nomascus_leucogenys
ENSECAG00000024040	LARP4B	83	69.293	ENSMEUG00000013114	-	83	69.293	Notamacropus_eugenii
ENSECAG00000024040	LARP4B	100	83.378	ENSOPRG00000003300	LARP4B	100	83.378	Ochotona_princeps
ENSECAG00000024040	LARP4B	100	81.732	ENSODEG00000001109	LARP4B	100	81.732	Octodon_degus
ENSECAG00000024040	LARP4B	100	58.430	ENSONIG00000017705	LARP4B	100	58.559	Oreochromis_niloticus
ENSECAG00000024040	LARP4B	100	72.919	ENSOANG00000006100	LARP4B	100	73.052	Ornithorhynchus_anatinus
ENSECAG00000024040	LARP4B	100	85.302	ENSOCUG00000004950	LARP4B	97	85.302	Oryctolagus_cuniculus
ENSECAG00000024040	LARP4B	100	53.885	ENSORLG00000006080	LARP4B	92	55.541	Oryzias_latipes
ENSECAG00000024040	LARP4B	100	53.750	ENSORLG00020020940	LARP4B	92	55.256	Oryzias_latipes_hni
ENSECAG00000024040	LARP4B	100	53.759	ENSORLG00015020608	LARP4B	91	55.677	Oryzias_latipes_hsok
ENSECAG00000024040	LARP4B	100	52.513	ENSOMEG00000019619	LARP4B	91	54.297	Oryzias_melastigma
ENSECAG00000024040	LARP4B	94	81.988	ENSOGAG00000011540	LARP4B	100	81.988	Otolemur_garnettii
ENSECAG00000024040	LARP4B	100	86.468	ENSOARG00000015320	LARP4B	98	86.468	Ovis_aries
ENSECAG00000024040	LARP4B	100	84.574	ENSPPAG00000039232	LARP4B	100	84.574	Pan_paniscus
ENSECAG00000024040	LARP4B	100	89.373	ENSPPRG00000009489	LARP4B	100	89.373	Panthera_pardus
ENSECAG00000024040	LARP4B	100	89.373	ENSPTIG00000008543	LARP4B	100	89.373	Panthera_tigris_altaica
ENSECAG00000024040	LARP4B	100	84.574	ENSPTRG00000002235	LARP4B	100	84.574	Pan_troglodytes
ENSECAG00000024040	LARP4B	100	85.250	ENSPANG00000023546	LARP4B	100	83.085	Papio_anubis
ENSECAG00000024040	LARP4B	98	57.692	ENSPKIG00000012368	LARP4B	92	58.683	Paramormyrops_kingsleyae
ENSECAG00000024040	LARP4B	76	84.127	ENSPSIG00000005600	LARP4B	99	84.127	Pelodiscus_sinensis
ENSECAG00000024040	LARP4B	95	52.766	ENSPMGG00000008261	LARP4B	87	52.766	Periophthalmus_magnuspinnatus
ENSECAG00000024040	LARP4B	100	86.604	ENSPEMG00000014052	Larp4b	100	86.604	Peromyscus_maniculatus_bairdii
ENSECAG00000024040	LARP4B	71	81.453	ENSPCIG00000006866	-	98	46.915	Phascolarctos_cinereus
ENSECAG00000024040	LARP4B	100	54.658	ENSPFOG00000000029	LARP4B	91	56.698	Poecilia_formosa
ENSECAG00000024040	LARP4B	100	54.902	ENSPLAG00000002871	LARP4B	91	57.511	Poecilia_latipinna
ENSECAG00000024040	LARP4B	100	54.467	ENSPMEG00000016361	LARP4B	91	56.622	Poecilia_mexicana
ENSECAG00000024040	LARP4B	100	84.865	ENSPPYG00000002035	LARP4B	97	84.865	Pongo_abelii
ENSECAG00000024040	LARP4B	100	84.303	ENSPCOG00000014688	LARP4B	100	84.303	Propithecus_coquereli
ENSECAG00000024040	LARP4B	85	97.143	ENSPVAG00000009784	LARP4B	83	82.770	Pteropus_vampyrus
ENSECAG00000024040	LARP4B	100	56.587	ENSPNYG00000024252	LARP4B	92	58.345	Pundamilia_nyererei
ENSECAG00000024040	LARP4B	92	53.546	ENSPNAG00000028956	larp4b	93	53.401	Pygocentrus_nattereri
ENSECAG00000024040	LARP4B	99	86.333	ENSRNOG00000015888	Larp4b	100	86.468	Rattus_norvegicus
ENSECAG00000024040	LARP4B	100	85.115	ENSRBIG00000033294	LARP4B	100	85.115	Rhinopithecus_bieti
ENSECAG00000024040	LARP4B	100	85.115	ENSRROG00000033879	LARP4B	100	85.115	Rhinopithecus_roxellana
ENSECAG00000024040	LARP4B	100	78.890	ENSSBOG00000021109	LARP4B	100	78.890	Saimiri_boliviensis_boliviensis
ENSECAG00000024040	LARP4B	100	74.733	ENSSHAG00000013392	LARP4B	100	74.733	Sarcophilus_harrisii
ENSECAG00000024040	LARP4B	92	58.883	ENSSFOG00015003256	LARP4B	84	59.163	Scleropages_formosus
ENSECAG00000024040	LARP4B	100	52.302	ENSSMAG00000005982	-	95	60.163	Scophthalmus_maximus
ENSECAG00000024040	LARP4B	100	55.638	ENSSDUG00000006704	LARP4B	96	56.069	Seriola_dumerili
ENSECAG00000024040	LARP4B	80	61.699	ENSSLDG00000020660	LARP4B	91	61.218	Seriola_lalandi_dorsalis
ENSECAG00000024040	LARP4B	63	98.113	ENSSARG00000001243	-	79	98.113	Sorex_araneus
ENSECAG00000024040	LARP4B	100	72.200	ENSSPUG00000002102	-	100	72.200	Sphenodon_punctatus
ENSECAG00000024040	LARP4B	90	78.778	ENSSPUG00000013734	-	91	78.778	Sphenodon_punctatus
ENSECAG00000024040	LARP4B	80	61.489	ENSSPAG00000014628	LARP4B	88	60.680	Stegastes_partitus
ENSECAG00000024040	LARP4B	100	85.967	ENSSSCG00000011162	LARP4B	100	87.336	Sus_scrofa
ENSECAG00000024040	LARP4B	100	75.201	ENSTGUG00000000811	-	100	75.201	Taeniopygia_guttata
ENSECAG00000024040	LARP4B	99	54.793	ENSTNIG00000007991	LARP4B	99	53.782	Tetraodon_nigroviridis
ENSECAG00000024040	LARP4B	100	55.627	ENSTNIG00000004571	-	90	57.444	Tetraodon_nigroviridis
ENSECAG00000024040	LARP4B	91	92.771	ENSTTRG00000011151	LARP4B	90	92.771	Tursiops_truncatus
ENSECAG00000024040	LARP4B	88	90.683	ENSUAMG00000016461	LARP4B	95	90.154	Ursus_americanus
ENSECAG00000024040	LARP4B	100	90.736	ENSUMAG00000016127	LARP4B	100	90.736	Ursus_maritimus
ENSECAG00000024040	LARP4B	51	94.944	ENSVPAG00000000128	-	73	94.944	Vicugna_pacos
ENSECAG00000024040	LARP4B	100	91.144	ENSVVUG00000008641	LARP4B	100	91.144	Vulpes_vulpes
ENSECAG00000024040	LARP4B	99	69.007	ENSXETG00000016882	larp4b	100	68.800	Xenopus_tropicalis
ENSECAG00000024040	LARP4B	100	52.118	ENSXCOG00000019952	LARP4B	63	90.598	Xiphophorus_couchianus
ENSECAG00000024040	LARP4B	100	54.693	ENSXMAG00000021533	LARP4B	91	56.540	Xiphophorus_maculatus