EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000024219 (Gene tree)
Gene ID: 100069703
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 39513 bases
Position: chr13:39928262-39967774
Accession: 100069703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000032683	MMR_HSR1	PF01926.23	5.6e-09	1	1
ENSECAP00000023868	MMR_HSR1	PF01926.23	7.4e-09	1	1
ENSECAP00000021693	MMR_HSR1	PF01926.23	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000056775	SRL-201	3876	-	ENSECAP00000032683	473 (aa)	XP_001499481	UPI0001FB307E
ENSECAT00000037165	SRL-204	549	-	ENSECAP00000043819	182 (aa)	-	-
ENSECAT00000026038	SRL-202	2427	-	ENSECAP00000021693	808 (aa)	-	F6WRB4
ENSECAT00000046110	SRL-203	4092	-	ENSECAP00000023868	538 (aa)	-	-

Gene Model

Click here to download ENSECAG00000024219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000024219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000024219	SRL	82	31.795	ENSECAG00000028265	EHD2	68	31.948
ENSECAG00000024219	SRL	63	35.235	ENSECAG00000017216	EHD4	55	35.235
ENSECAG00000024219	SRL	77	33.973	ENSECAG00000011638	EHD1	68	34.146
ENSECAG00000024219	SRL	79	32.708	ENSECAG00000015195	EHD3	76	34.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000024219	SRL	99	95.763	ENSG00000185739	SRL	99	97.209	Homo_sapiens
ENSECAG00000024219	SRL	99	80.932	ENSAPOG00000018093	srl	99	83.070	Acanthochromis_polyacanthus
ENSECAG00000024219	SRL	93	76.190	ENSAPOG00000012432	SRL	98	74.664	Acanthochromis_polyacanthus
ENSECAG00000024219	SRL	99	98.009	ENSAMEG00000010862	SRL	89	92.424	Ailuropoda_melanoleuca
ENSECAG00000024219	SRL	94	75.395	ENSACIG00000015419	SRL	99	75.395	Amphilophus_citrinellus
ENSECAG00000024219	SRL	96	82.965	ENSACIG00000015799	srl	99	82.965	Amphilophus_citrinellus
ENSECAG00000024219	SRL	92	83.834	ENSAOCG00000007574	srl	99	83.834	Amphiprion_ocellaris
ENSECAG00000024219	SRL	96	74.066	ENSAOCG00000017049	SRL	99	74.066	Amphiprion_ocellaris
ENSECAG00000024219	SRL	96	70.264	ENSAPEG00000006533	SRL	99	70.264	Amphiprion_percula
ENSECAG00000024219	SRL	99	81.144	ENSAPEG00000006911	srl	99	81.144	Amphiprion_percula
ENSECAG00000024219	SRL	99	80.720	ENSATEG00000024315	srl	99	80.932	Anabas_testudineus
ENSECAG00000024219	SRL	93	73.128	ENSATEG00000009643	SRL	52	72.247	Anabas_testudineus
ENSECAG00000024219	SRL	99	85.626	ENSACAG00000016380	SRL	89	86.653	Anolis_carolinensis
ENSECAG00000024219	SRL	96	71.215	ENSACLG00000024674	SRL	55	74.693	Astatotilapia_calliptera
ENSECAG00000024219	SRL	98	81.681	ENSACLG00000027685	srl	98	82.628	Astatotilapia_calliptera
ENSECAG00000024219	SRL	99	81.356	ENSAMXG00000018789	srl	92	81.356	Astyanax_mexicanus
ENSECAG00000024219	SRL	92	72.706	ENSAMXG00000038693	SRL	99	72.566	Astyanax_mexicanus
ENSECAG00000024219	SRL	96	96.930	ENSBTAG00000001078	SRL	100	73.608	Bos_taurus
ENSECAG00000024219	SRL	99	96.186	ENSCJAG00000019750	SRL	99	96.186	Callithrix_jacchus
ENSECAG00000024219	SRL	95	99.043	ENSCAFG00000019233	SRL	86	99.043	Canis_familiaris
ENSECAG00000024219	SRL	96	97.368	ENSCAFG00020025024	SRL	99	78.486	Canis_lupus_dingo
ENSECAG00000024219	SRL	99	95.106	ENSCHIG00000017927	SRL	99	71.841	Capra_hircus
ENSECAG00000024219	SRL	99	96.822	ENSTSYG00000007919	SRL	99	97.907	Carlito_syrichta
ENSECAG00000024219	SRL	96	96.264	ENSCPOG00000012643	SRL	99	95.763	Cavia_porcellus
ENSECAG00000024219	SRL	99	90.466	ENSCCAG00000032646	SRL	99	97.619	Cebus_capucinus
ENSECAG00000024219	SRL	99	95.975	ENSCATG00000032227	-	99	95.975	Cercocebus_atys
ENSECAG00000024219	SRL	96	96.484	ENSCLAG00000016242	SRL	99	95.975	Chinchilla_lanigera
ENSECAG00000024219	SRL	96	96.681	ENSCSAG00000009635	-	99	61.747	Chlorocebus_sabaeus
ENSECAG00000024219	SRL	82	96.891	ENSCHOG00000001618	SRL	89	96.891	Choloepus_hoffmanni
ENSECAG00000024219	SRL	97	94.057	ENSCPBG00000026371	SRL	100	88.660	Chrysemys_picta_bellii
ENSECAG00000024219	SRL	88	60.911	ENSCING00000005231	-	91	61.084	Ciona_intestinalis
ENSECAG00000024219	SRL	99	95.975	ENSCANG00000035872	SRL	99	97.209	Colobus_angolensis_palliatus
ENSECAG00000024219	SRL	96	96.681	ENSCGRG00001016630	Srl	99	95.763	Cricetulus_griseus_chok1gshd
ENSECAG00000024219	SRL	96	96.681	ENSCGRG00000005458	Srl	99	95.763	Cricetulus_griseus_crigri
ENSECAG00000024219	SRL	99	81.568	ENSCSEG00000016151	srl	99	81.568	Cynoglossus_semilaevis
ENSECAG00000024219	SRL	99	68.288	ENSCSEG00000011866	SRL	94	68.288	Cynoglossus_semilaevis
ENSECAG00000024219	SRL	99	81.013	ENSCVAG00000003513	srl	99	81.356	Cyprinodon_variegatus
ENSECAG00000024219	SRL	93	74.723	ENSCVAG00000022465	SRL	60	73.836	Cyprinodon_variegatus
ENSECAG00000024219	SRL	99	81.992	ENSDARG00000104587	srl	99	81.992	Danio_rerio
ENSECAG00000024219	SRL	80	77.285	ENSDARG00000112959	CABZ01072309.1	99	77.285	Danio_rerio
ENSECAG00000024219	SRL	96	96.044	ENSDNOG00000011643	SRL	99	73.567	Dasypus_novemcinctus
ENSECAG00000024219	SRL	95	96.452	ENSDORG00000014807	Srl	99	95.551	Dipodomys_ordii
ENSECAG00000024219	SRL	77	65.775	ENSEBUG00000015937	srl	88	68.103	Eptatretus_burgeri
ENSECAG00000024219	SRL	100	99.442	ENSEASG00005000942	SRL	100	94.111	Equus_asinus_asinus
ENSECAG00000024219	SRL	99	77.778	ENSELUG00000015616	srl	99	77.778	Esox_lucius
ENSECAG00000024219	SRL	99	97.034	ENSFCAG00000022075	SRL	99	97.034	Felis_catus
ENSECAG00000024219	SRL	96	91.611	ENSFALG00000004328	SRL	64	91.778	Ficedula_albicollis
ENSECAG00000024219	SRL	95	97.118	ENSFDAG00000006199	SRL	99	95.975	Fukomys_damarensis
ENSECAG00000024219	SRL	99	70.697	ENSFHEG00000011854	SRL	98	76.190	Fundulus_heteroclitus
ENSECAG00000024219	SRL	99	79.873	ENSFHEG00000011239	srl	98	80.963	Fundulus_heteroclitus
ENSECAG00000024219	SRL	93	81.015	ENSGMOG00000014954	srl	99	81.015	Gadus_morhua
ENSECAG00000024219	SRL	100	89.641	ENSGALG00000038884	SRL	100	89.641	Gallus_gallus
ENSECAG00000024219	SRL	99	80.297	ENSGAFG00000000010	srl	98	82.483	Gambusia_affinis
ENSECAG00000024219	SRL	93	76.190	ENSGAFG00000016984	SRL	98	76.190	Gambusia_affinis
ENSECAG00000024219	SRL	93	81.015	ENSGACG00000011332	srl	99	81.015	Gasterosteus_aculeatus
ENSECAG00000024219	SRL	99	95.551	ENSGGOG00000011312	-	99	95.551	Gorilla_gorilla
ENSECAG00000024219	SRL	98	81.681	ENSHBUG00000007581	srl	98	82.628	Haplochromis_burtoni
ENSECAG00000024219	SRL	96	71.002	ENSHBUG00000015710	SRL	58	71.002	Haplochromis_burtoni
ENSECAG00000024219	SRL	96	97.363	ENSHGLG00000015271	SRL	99	96.822	Heterocephalus_glaber_female
ENSECAG00000024219	SRL	96	97.363	ENSHGLG00100019378	SRL	99	96.822	Heterocephalus_glaber_male
ENSECAG00000024219	SRL	99	81.064	ENSHCOG00000008687	srl	98	83.673	Hippocampus_comes
ENSECAG00000024219	SRL	93	71.903	ENSHCOG00000001012	SRL	50	70.796	Hippocampus_comes
ENSECAG00000024219	SRL	92	69.495	ENSIPUG00000011609	SRL	95	68.349	Ictalurus_punctatus
ENSECAG00000024219	SRL	99	80.508	ENSIPUG00000012513	srl	99	80.508	Ictalurus_punctatus
ENSECAG00000024219	SRL	96	96.460	ENSSTOG00000021151	-	99	95.551	Ictidomys_tridecemlineatus
ENSECAG00000024219	SRL	99	95.127	ENSJJAG00000016400	Srl	99	95.127	Jaculus_jaculus
ENSECAG00000024219	SRL	93	75.909	ENSKMAG00000019537	SRL	99	75.909	Kryptolebias_marmoratus
ENSECAG00000024219	SRL	98	80.562	ENSKMAG00000014115	srl	94	84.309	Kryptolebias_marmoratus
ENSECAG00000024219	SRL	99	80.297	ENSLBEG00000026643	srl	99	80.297	Labrus_bergylta
ENSECAG00000024219	SRL	96	74.066	ENSLBEG00000013811	SRL	98	73.846	Labrus_bergylta
ENSECAG00000024219	SRL	96	86.062	ENSLACG00000002825	SRL	99	86.062	Latimeria_chalumnae
ENSECAG00000024219	SRL	99	83.582	ENSLOCG00000002644	srl	99	83.582	Lepisosteus_oculatus
ENSECAG00000024219	SRL	96	96.681	ENSLAFG00000006329	SRL	99	70.890	Loxodonta_africana
ENSECAG00000024219	SRL	91	97.209	ENSMFAG00000037383	SRL	99	97.209	Macaca_fascicularis
ENSECAG00000024219	SRL	96	96.460	ENSMNEG00000019236	-	96	96.460	Macaca_nemestrina
ENSECAG00000024219	SRL	99	88.136	ENSMLEG00000032156	SRL	99	88.136	Mandrillus_leucophaeus
ENSECAG00000024219	SRL	93	73.068	ENSMAMG00000013756	SRL	53	72.967	Mastacembelus_armatus
ENSECAG00000024219	SRL	93	83.900	ENSMAMG00000023322	srl	99	80.171	Mastacembelus_armatus
ENSECAG00000024219	SRL	96	71.215	ENSMZEG00005004010	SRL	57	72.907	Maylandia_zebra
ENSECAG00000024219	SRL	98	81.681	ENSMZEG00005004548	srl	98	82.628	Maylandia_zebra
ENSECAG00000024219	SRL	96	90.308	ENSMGAG00000009342	SRL	99	88.384	Meleagris_gallopavo
ENSECAG00000024219	SRL	99	95.763	ENSMICG00000032307	SRL	99	95.763	Microcebus_murinus
ENSECAG00000024219	SRL	99	95.339	ENSMOCG00000008208	Srl	99	95.339	Microtus_ochrogaster
ENSECAG00000024219	SRL	93	72.247	ENSMMOG00000021572	SRL	99	72.247	Mola_mola
ENSECAG00000024219	SRL	93	83.673	ENSMMOG00000013970	srl	98	83.673	Mola_mola
ENSECAG00000024219	SRL	97	94.978	ENSMODG00000016380	-	100	62.306	Monodelphis_domestica
ENSECAG00000024219	SRL	93	83.447	ENSMALG00000005039	srl	98	83.447	Monopterus_albus
ENSECAG00000024219	SRL	88	76.867	ENSMALG00000000670	SRL	99	74.239	Monopterus_albus
ENSECAG00000024219	SRL	96	95.824	MGP_CAROLIEiJ_G0020400	Srl	99	95.127	Mus_caroli
ENSECAG00000024219	SRL	96	95.824	ENSMUSG00000022519	Srl	99	95.127	Mus_musculus
ENSECAG00000024219	SRL	93	96.154	MGP_PahariEiJ_G0016108	Srl	99	65.049	Mus_pahari
ENSECAG00000024219	SRL	96	95.824	MGP_SPRETEiJ_G0021294	Srl	99	95.127	Mus_spretus
ENSECAG00000024219	SRL	96	97.363	ENSMPUG00000015025	SRL	99	76.887	Mustela_putorius_furo
ENSECAG00000024219	SRL	97	96.087	ENSMLUG00000030733	SRL	99	76.520	Myotis_lucifugus
ENSECAG00000024219	SRL	96	96.044	ENSNGAG00000019741	Srl	99	95.339	Nannospalax_galili
ENSECAG00000024219	SRL	96	71.215	ENSNBRG00000002422	SRL	56	74.592	Neolamprologus_brichardi
ENSECAG00000024219	SRL	98	81.681	ENSNBRG00000023775	srl	98	81.681	Neolamprologus_brichardi
ENSECAG00000024219	SRL	99	88.983	ENSNLEG00000029051	SRL	99	88.983	Nomascus_leucogenys
ENSECAG00000024219	SRL	92	97.922	ENSOPRG00000000477	-	89	97.922	Ochotona_princeps
ENSECAG00000024219	SRL	96	95.604	ENSODEG00000013256	SRL	99	95.127	Octodon_degus
ENSECAG00000024219	SRL	99	80.085	ENSONIG00000005192	srl	99	80.085	Oreochromis_niloticus
ENSECAG00000024219	SRL	96	96.460	ENSOCUG00000025140	SRL	99	68.969	Oryctolagus_cuniculus
ENSECAG00000024219	SRL	99	79.873	ENSORLG00000008291	srl	97	79.873	Oryzias_latipes
ENSECAG00000024219	SRL	96	74.009	ENSORLG00000015064	SRL	99	74.009	Oryzias_latipes
ENSECAG00000024219	SRL	94	75.395	ENSORLG00020018173	SRL	99	74.229	Oryzias_latipes_hni
ENSECAG00000024219	SRL	99	79.661	ENSORLG00020019784	srl	85	79.661	Oryzias_latipes_hni
ENSECAG00000024219	SRL	94	75.621	ENSORLG00015019063	SRL	99	74.449	Oryzias_latipes_hsok
ENSECAG00000024219	SRL	99	79.237	ENSORLG00015009342	srl	97	79.237	Oryzias_latipes_hsok
ENSECAG00000024219	SRL	94	73.465	ENSOMEG00000005682	SRL	53	73.465	Oryzias_melastigma
ENSECAG00000024219	SRL	99	79.449	ENSOMEG00000010006	srl	97	82.460	Oryzias_melastigma
ENSECAG00000024219	SRL	96	96.018	ENSOGAG00000029266	SRL	99	70.048	Otolemur_garnettii
ENSECAG00000024219	SRL	99	95.717	ENSOARG00000003074	SRL	85	88.935	Ovis_aries
ENSECAG00000024219	SRL	96	96.703	ENSPPAG00000024919	-	99	97.209	Pan_paniscus
ENSECAG00000024219	SRL	99	97.246	ENSPPRG00000010274	SRL	99	97.907	Panthera_pardus
ENSECAG00000024219	SRL	99	97.246	ENSPTIG00000015162	SRL	99	97.907	Panthera_tigris_altaica
ENSECAG00000024219	SRL	99	95.763	ENSPTRG00000007712	SRL	99	97.209	Pan_troglodytes
ENSECAG00000024219	SRL	96	96.468	ENSPANG00000013804	SRL	97	96.681	Papio_anubis
ENSECAG00000024219	SRL	99	81.780	ENSPKIG00000006405	srl	99	81.780	Paramormyrops_kingsleyae
ENSECAG00000024219	SRL	99	73.729	ENSPKIG00000024974	SRL	94	73.729	Paramormyrops_kingsleyae
ENSECAG00000024219	SRL	96	90.728	ENSPSIG00000008586	SRL	51	90.728	Pelodiscus_sinensis
ENSECAG00000024219	SRL	93	72.562	ENSPMGG00000023505	-	99	71.847	Periophthalmus_magnuspinnatus
ENSECAG00000024219	SRL	98	82.684	ENSPMGG00000021081	srl	99	82.684	Periophthalmus_magnuspinnatus
ENSECAG00000024219	SRL	96	96.044	ENSPEMG00000015842	Srl	99	95.127	Peromyscus_maniculatus_bairdii
ENSECAG00000024219	SRL	88	68.664	ENSPMAG00000004786	srl	99	68.433	Petromyzon_marinus
ENSECAG00000024219	SRL	97	94.978	ENSPCIG00000012128	SRL	100	94.978	Phascolarctos_cinereus
ENSECAG00000024219	SRL	99	78.306	ENSPFOG00000011408	srl	97	78.992	Poecilia_formosa
ENSECAG00000024219	SRL	93	75.737	ENSPLAG00000002932	SRL	98	74.603	Poecilia_latipinna
ENSECAG00000024219	SRL	95	82.262	ENSPLAG00000008017	srl	98	82.262	Poecilia_latipinna
ENSECAG00000024219	SRL	96	71.975	ENSPMEG00000005890	SRL	61	71.215	Poecilia_mexicana
ENSECAG00000024219	SRL	99	80.085	ENSPMEG00000006745	srl	98	82.262	Poecilia_mexicana
ENSECAG00000024219	SRL	93	76.871	ENSPREG00000000315	SRL	98	75.737	Poecilia_reticulata
ENSECAG00000024219	SRL	99	79.873	ENSPREG00000007751	srl	98	82.658	Poecilia_reticulata
ENSECAG00000024219	SRL	88	97.847	ENSPPYG00000007053	SRL	99	96.934	Pongo_abelii
ENSECAG00000024219	SRL	97	95.186	ENSPCAG00000003378	-	87	85.230	Procavia_capensis
ENSECAG00000024219	SRL	99	95.127	ENSPCOG00000023135	SRL	99	97.209	Propithecus_coquereli
ENSECAG00000024219	SRL	96	97.788	ENSPVAG00000006586	SRL	99	77.765	Pteropus_vampyrus
ENSECAG00000024219	SRL	98	81.681	ENSPNYG00000001200	srl	98	82.628	Pundamilia_nyererei
ENSECAG00000024219	SRL	96	71.215	ENSPNYG00000003423	SRL	56	72.907	Pundamilia_nyererei
ENSECAG00000024219	SRL	97	72.668	ENSPNAG00000007361	-	95	72.668	Pygocentrus_nattereri
ENSECAG00000024219	SRL	99	80.085	ENSPNAG00000023106	srl	99	80.085	Pygocentrus_nattereri
ENSECAG00000024219	SRL	96	96.681	ENSRNOG00000005269	Srl	99	68.612	Rattus_norvegicus
ENSECAG00000024219	SRL	96	96.681	ENSRBIG00000042358	SRL	99	68.950	Rhinopithecus_bieti
ENSECAG00000024219	SRL	99	96.186	ENSSBOG00000029273	SRL	99	96.186	Saimiri_boliviensis_boliviensis
ENSECAG00000024219	SRL	97	94.978	ENSSHAG00000011715	-	58	97.608	Sarcophilus_harrisii
ENSECAG00000024219	SRL	99	80.579	ENSSFOG00015009773	srl	99	82.303	Scleropages_formosus
ENSECAG00000024219	SRL	93	78.005	ENSSFOG00015021327	SRL	51	76.535	Scleropages_formosus
ENSECAG00000024219	SRL	99	80.508	ENSSMAG00000016274	srl	98	82.405	Scophthalmus_maximus
ENSECAG00000024219	SRL	93	73.026	ENSSMAG00000002232	SRL	50	71.806	Scophthalmus_maximus
ENSECAG00000024219	SRL	93	83.900	ENSSDUG00000010808	srl	97	83.900	Seriola_dumerili
ENSECAG00000024219	SRL	93	74.777	ENSSDUG00000009161	SRL	98	74.777	Seriola_dumerili
ENSECAG00000024219	SRL	96	82.561	ENSSLDG00000022024	srl	99	80.932	Seriola_lalandi_dorsalis
ENSECAG00000024219	SRL	93	74.342	ENSSLDG00000014601	SRL	99	74.449	Seriola_lalandi_dorsalis
ENSECAG00000024219	SRL	96	90.508	ENSSPUG00000016859	SRL	99	90.508	Sphenodon_punctatus
ENSECAG00000024219	SRL	93	75.909	ENSSPAG00000014254	SRL	98	74.773	Stegastes_partitus
ENSECAG00000024219	SRL	99	81.144	ENSSPAG00000019105	srl	99	81.144	Stegastes_partitus
ENSECAG00000024219	SRL	96	97.149	ENSSSCG00000007949	SRL	100	97.550	Sus_scrofa
ENSECAG00000024219	SRL	77	93.094	ENSTGUG00000016121	-	96	93.966	Taeniopygia_guttata
ENSECAG00000024219	SRL	96	91.391	ENSTGUG00000003951	-	99	91.391	Taeniopygia_guttata
ENSECAG00000024219	SRL	99	81.356	ENSTRUG00000006005	srl	99	81.356	Takifugu_rubripes
ENSECAG00000024219	SRL	89	75.418	ENSTRUG00000013310	SRL	55	75.418	Takifugu_rubripes
ENSECAG00000024219	SRL	95	82.444	ENSTNIG00000009739	srl	99	80.932	Tetraodon_nigroviridis
ENSECAG00000024219	SRL	93	97.500	ENSTTRG00000002709	-	65	98.034	Tursiops_truncatus
ENSECAG00000024219	SRL	96	97.137	ENSUAMG00000005701	SRL	99	79.294	Ursus_americanus
ENSECAG00000024219	SRL	96	97.357	ENSUMAG00000002574	SRL	99	79.684	Ursus_maritimus
ENSECAG00000024219	SRL	96	97.582	ENSVVUG00000016331	-	87	78.298	Vulpes_vulpes
ENSECAG00000024219	SRL	97	87.636	ENSXETG00000017313	srl	99	89.111	Xenopus_tropicalis
ENSECAG00000024219	SRL	95	74.667	ENSXCOG00000014584	SRL	99	74.667	Xiphophorus_couchianus
ENSECAG00000024219	SRL	89	85.000	ENSXCOG00000010424	srl	98	83.916	Xiphophorus_couchianus
ENSECAG00000024219	SRL	99	80.297	ENSXMAG00000004625	srl	95	80.297	Xiphophorus_maculatus
ENSECAG00000024219	SRL	96	72.591	ENSXMAG00000027598	SRL	62	73.348	Xiphophorus_maculatus