EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000024236 (Gene tree)
Gene ID: 100055680
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 31783 bases
Position: chr9:45936104-45967886
Accession: 21697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000021759	POP1	PF06978.11	1.8e-37	1	2
ENSECAP00000021759	POP1	PF06978.11	1.8e-37	2	2
ENSECAP00000021759	POPLD	PF08170.12	3.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000026111	-	3262	-	ENSECAP00000021759	1017 (aa)	XP_001915387	F6YG28

Gene Model

Click here to download ENSECAG00000024236's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG
ecb03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000024236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000024236	POP1	100	84.277	ENSG00000104356	POP1	100	91.257	Homo_sapiens
ENSECAG00000024236	POP1	100	48.956	ENSAPOG00000008198	pop1	100	48.811	Acanthochromis_polyacanthus
ENSECAG00000024236	POP1	100	82.600	ENSAMEG00000000556	POP1	100	82.600	Ailuropoda_melanoleuca
ENSECAG00000024236	POP1	100	47.495	ENSACIG00000004169	POP1	100	47.206	Amphilophus_citrinellus
ENSECAG00000024236	POP1	100	48.528	ENSAOCG00000010991	pop1	100	48.338	Amphiprion_ocellaris
ENSECAG00000024236	POP1	91	47.812	ENSAPEG00000007607	pop1	96	47.917	Amphiprion_percula
ENSECAG00000024236	POP1	100	47.014	ENSATEG00000024814	POP1	100	46.768	Anabas_testudineus
ENSECAG00000024236	POP1	92	62.234	ENSAPLG00000014418	POP1	99	62.234	Anas_platyrhynchos
ENSECAG00000024236	POP1	99	56.780	ENSACAG00000016083	POP1	100	56.923	Anolis_carolinensis
ENSECAG00000024236	POP1	88	89.614	ENSANAG00000026360	POP1	99	89.614	Aotus_nancymaae
ENSECAG00000024236	POP1	100	47.818	ENSACLG00000010951	pop1	100	47.081	Astatotilapia_calliptera
ENSECAG00000024236	POP1	100	48.045	ENSAMXG00000014483	POP1	100	47.765	Astyanax_mexicanus
ENSECAG00000024236	POP1	100	81.711	ENSBTAG00000012596	POP1	100	81.711	Bos_taurus
ENSECAG00000024236	POP1	100	82.227	ENSCJAG00000015567	POP1	100	82.227	Callithrix_jacchus
ENSECAG00000024236	POP1	100	83.972	ENSCAFG00000000469	POP1	100	83.972	Canis_familiaris
ENSECAG00000024236	POP1	100	85.251	ENSCAFG00020026765	POP1	100	85.251	Canis_lupus_dingo
ENSECAG00000024236	POP1	100	82.122	ENSCHIG00000017066	POP1	100	82.122	Capra_hircus
ENSECAG00000024236	POP1	100	83.105	ENSTSYG00000003097	POP1	100	83.105	Carlito_syrichta
ENSECAG00000024236	POP1	100	75.899	ENSCAPG00000007251	POP1	100	75.899	Cavia_aperea
ENSECAG00000024236	POP1	100	78.613	ENSCPOG00000002901	POP1	100	78.613	Cavia_porcellus
ENSECAG00000024236	POP1	100	82.617	ENSCCAG00000018939	POP1	94	90.669	Cebus_capucinus
ENSECAG00000024236	POP1	100	83.301	ENSCATG00000040916	POP1	100	83.301	Cercocebus_atys
ENSECAG00000024236	POP1	100	80.957	ENSCLAG00000007208	POP1	97	80.957	Chinchilla_lanigera
ENSECAG00000024236	POP1	90	83.080	ENSCSAG00000012340	POP1	99	83.080	Chlorocebus_sabaeus
ENSECAG00000024236	POP1	95	78.872	ENSCHOG00000011432	POP1	100	78.872	Choloepus_hoffmanni
ENSECAG00000024236	POP1	100	65.005	ENSCPBG00000006373	POP1	100	64.912	Chrysemys_picta_bellii
ENSECAG00000024236	POP1	82	38.911	ENSCING00000008323	-	88	38.911	Ciona_intestinalis
ENSECAG00000024236	POP1	100	83.398	ENSCANG00000001647	POP1	100	83.398	Colobus_angolensis_palliatus
ENSECAG00000024236	POP1	100	74.732	ENSCGRG00001017308	Pop1	100	74.732	Cricetulus_griseus_chok1gshd
ENSECAG00000024236	POP1	100	69.073	ENSCGRG00000010824	Pop1	100	69.073	Cricetulus_griseus_crigri
ENSECAG00000024236	POP1	100	45.263	ENSCSEG00000008737	POP1	100	45.472	Cynoglossus_semilaevis
ENSECAG00000024236	POP1	100	47.734	ENSCVAG00000022248	pop1	100	47.734	Cyprinodon_variegatus
ENSECAG00000024236	POP1	100	77.820	ENSDNOG00000019974	POP1	100	77.820	Dasypus_novemcinctus
ENSECAG00000024236	POP1	100	71.191	ENSDORG00000015384	Pop1	100	70.703	Dipodomys_ordii
ENSECAG00000024236	POP1	61	33.544	FBgn0026702	l(1)G0045	69	33.545	Drosophila_melanogaster
ENSECAG00000024236	POP1	89	70.526	ENSETEG00000007839	POP1	88	70.526	Echinops_telfairi
ENSECAG00000024236	POP1	100	98.820	ENSEASG00005003189	POP1	98	98.820	Equus_asinus_asinus
ENSECAG00000024236	POP1	67	80.556	ENSEEUG00000003050	-	70	80.556	Erinaceus_europaeus
ENSECAG00000024236	POP1	100	47.353	ENSELUG00000003526	pop1	100	47.592	Esox_lucius
ENSECAG00000024236	POP1	100	86.824	ENSFCAG00000002168	POP1	100	86.824	Felis_catus
ENSECAG00000024236	POP1	100	59.593	ENSFALG00000005711	POP1	100	59.593	Ficedula_albicollis
ENSECAG00000024236	POP1	100	80.371	ENSFDAG00000017068	POP1	100	80.371	Fukomys_damarensis
ENSECAG00000024236	POP1	100	47.177	ENSFHEG00000019518	pop1	100	47.560	Fundulus_heteroclitus
ENSECAG00000024236	POP1	95	45.800	ENSGMOG00000000659	POP1	99	45.683	Gadus_morhua
ENSECAG00000024236	POP1	100	47.445	ENSGAFG00000019770	POP1	100	47.252	Gambusia_affinis
ENSECAG00000024236	POP1	100	46.029	ENSGACG00000003499	pop1	100	45.837	Gasterosteus_aculeatus
ENSECAG00000024236	POP1	100	62.913	ENSGAGG00000011737	POP1	98	63.415	Gopherus_agassizii
ENSECAG00000024236	POP1	100	83.984	ENSGGOG00000003176	POP1	100	83.984	Gorilla_gorilla
ENSECAG00000024236	POP1	100	47.768	ENSHBUG00000021583	pop1	100	47.863	Haplochromis_burtoni
ENSECAG00000024236	POP1	100	79.590	ENSHGLG00000006029	POP1	100	79.590	Heterocephalus_glaber_female
ENSECAG00000024236	POP1	100	79.590	ENSHGLG00100016879	POP1	100	79.590	Heterocephalus_glaber_male
ENSECAG00000024236	POP1	90	49.786	ENSHCOG00000013888	pop1	96	49.786	Hippocampus_comes
ENSECAG00000024236	POP1	100	44.252	ENSIPUG00000018336	pop1	100	43.907	Ictalurus_punctatus
ENSECAG00000024236	POP1	100	82.324	ENSSTOG00000011455	POP1	97	82.324	Ictidomys_tridecemlineatus
ENSECAG00000024236	POP1	100	75.910	ENSJJAG00000013325	Pop1	100	75.910	Jaculus_jaculus
ENSECAG00000024236	POP1	100	46.654	ENSKMAG00000001346	POP1	100	47.132	Kryptolebias_marmoratus
ENSECAG00000024236	POP1	89	48.370	ENSLBEG00000024457	POP1	100	45.648	Labrus_bergylta
ENSECAG00000024236	POP1	93	55.746	ENSLACG00000012498	POP1	99	55.511	Latimeria_chalumnae
ENSECAG00000024236	POP1	100	51.641	ENSLOCG00000009817	POP1	100	51.547	Lepisosteus_oculatus
ENSECAG00000024236	POP1	100	82.668	ENSLAFG00000010770	POP1	100	82.668	Loxodonta_africana
ENSECAG00000024236	POP1	100	83.301	ENSMFAG00000000347	POP1	100	83.301	Macaca_fascicularis
ENSECAG00000024236	POP1	100	82.812	ENSMNEG00000036870	POP1	100	82.812	Macaca_nemestrina
ENSECAG00000024236	POP1	100	83.203	ENSMLEG00000034986	POP1	100	83.203	Mandrillus_leucophaeus
ENSECAG00000024236	POP1	100	47.193	ENSMAMG00000004040	pop1	100	47.059	Mastacembelus_armatus
ENSECAG00000024236	POP1	100	47.958	ENSMZEG00005025448	pop1	100	47.408	Maylandia_zebra
ENSECAG00000024236	POP1	100	57.645	ENSMGAG00000012167	POP1	100	58.065	Meleagris_gallopavo
ENSECAG00000024236	POP1	100	75.415	ENSMAUG00000017537	Pop1	100	75.365	Mesocricetus_auratus
ENSECAG00000024236	POP1	100	84.766	ENSMICG00000004361	POP1	100	84.766	Microcebus_murinus
ENSECAG00000024236	POP1	100	73.998	ENSMOCG00000006356	Pop1	100	74.487	Microtus_ochrogaster
ENSECAG00000024236	POP1	100	44.141	ENSMMOG00000018242	pop1	100	44.141	Mola_mola
ENSECAG00000024236	POP1	100	68.538	ENSMODG00000006561	POP1	100	68.538	Monodelphis_domestica
ENSECAG00000024236	POP1	93	52.335	ENSMALG00000012621	POP1	100	48.184	Monopterus_albus
ENSECAG00000024236	POP1	100	74.902	MGP_CAROLIEiJ_G0019726	Pop1	100	74.902	Mus_caroli
ENSECAG00000024236	POP1	100	75.391	ENSMUSG00000022325	Pop1	100	75.391	Mus_musculus
ENSECAG00000024236	POP1	100	75.293	MGP_PahariEiJ_G0019735	Pop1	100	75.293	Mus_pahari
ENSECAG00000024236	POP1	100	75.098	MGP_SPRETEiJ_G0020622	Pop1	100	75.098	Mus_spretus
ENSECAG00000024236	POP1	100	84.231	ENSMPUG00000015250	POP1	100	84.231	Mustela_putorius_furo
ENSECAG00000024236	POP1	100	80.373	ENSMLUG00000010204	POP1	100	80.471	Myotis_lucifugus
ENSECAG00000024236	POP1	100	79.883	ENSNGAG00000001582	Pop1	100	79.883	Nannospalax_galili
ENSECAG00000024236	POP1	89	48.759	ENSNBRG00000002356	pop1	94	47.886	Neolamprologus_brichardi
ENSECAG00000024236	POP1	100	83.203	ENSNLEG00000002541	POP1	100	83.203	Nomascus_leucogenys
ENSECAG00000024236	POP1	95	60.366	ENSMEUG00000003118	POP1	99	60.366	Notamacropus_eugenii
ENSECAG00000024236	POP1	100	77.259	ENSOPRG00000007667	POP1	100	77.259	Ochotona_princeps
ENSECAG00000024236	POP1	100	79.337	ENSODEG00000003984	POP1	100	79.337	Octodon_degus
ENSECAG00000024236	POP1	100	48.049	ENSONIG00000016445	pop1	100	48.282	Oreochromis_niloticus
ENSECAG00000024236	POP1	59	70.732	ENSOANG00000001278	-	94	70.732	Ornithorhynchus_anatinus
ENSECAG00000024236	POP1	100	81.438	ENSOCUG00000017400	POP1	100	81.438	Oryctolagus_cuniculus
ENSECAG00000024236	POP1	100	47.445	ENSORLG00000002839	pop1	100	47.541	Oryzias_latipes
ENSECAG00000024236	POP1	90	48.982	ENSORLG00020022450	POP1	96	48.765	Oryzias_latipes_hni
ENSECAG00000024236	POP1	100	48.081	ENSORLG00015012746	POP1	100	48.081	Oryzias_latipes_hsok
ENSECAG00000024236	POP1	100	47.716	ENSOMEG00000006915	pop1	99	47.864	Oryzias_melastigma
ENSECAG00000024236	POP1	100	82.031	ENSOGAG00000001466	POP1	100	82.031	Otolemur_garnettii
ENSECAG00000024236	POP1	100	84.375	ENSPPAG00000018410	POP1	100	84.375	Pan_paniscus
ENSECAG00000024236	POP1	100	86.346	ENSPPRG00000005002	POP1	100	86.346	Panthera_pardus
ENSECAG00000024236	POP1	100	86.640	ENSPTIG00000016527	POP1	100	86.640	Panthera_tigris_altaica
ENSECAG00000024236	POP1	100	84.082	ENSPTRG00000020458	POP1	100	84.082	Pan_troglodytes
ENSECAG00000024236	POP1	100	83.203	ENSPANG00000009704	POP1	100	83.203	Papio_anubis
ENSECAG00000024236	POP1	100	50.339	ENSPKIG00000016325	POP1	100	50.289	Paramormyrops_kingsleyae
ENSECAG00000024236	POP1	100	62.877	ENSPSIG00000012343	POP1	100	62.888	Pelodiscus_sinensis
ENSECAG00000024236	POP1	90	49.404	ENSPMGG00000022253	POP1	95	49.947	Periophthalmus_magnuspinnatus
ENSECAG00000024236	POP1	99	73.950	ENSPEMG00000023633	Pop1	100	73.950	Peromyscus_maniculatus_bairdii
ENSECAG00000024236	POP1	90	42.573	ENSPMAG00000003209	POP1	100	42.857	Petromyzon_marinus
ENSECAG00000024236	POP1	100	68.304	ENSPCIG00000012216	POP1	100	68.569	Phascolarctos_cinereus
ENSECAG00000024236	POP1	100	48.643	ENSPFOG00000012490	POP1	100	48.450	Poecilia_formosa
ENSECAG00000024236	POP1	100	48.303	ENSPLAG00000004646	POP1	100	48.109	Poecilia_latipinna
ENSECAG00000024236	POP1	100	48.643	ENSPMEG00000019592	POP1	100	48.450	Poecilia_mexicana
ENSECAG00000024236	POP1	100	48.252	ENSPREG00000020951	POP1	100	48.058	Poecilia_reticulata
ENSECAG00000024236	POP1	100	83.594	ENSPPYG00000018777	POP1	100	83.594	Pongo_abelii
ENSECAG00000024236	POP1	100	75.707	ENSPCAG00000016662	POP1	100	75.707	Procavia_capensis
ENSECAG00000024236	POP1	100	86.035	ENSPCOG00000019420	POP1	100	86.035	Propithecus_coquereli
ENSECAG00000024236	POP1	100	85.167	ENSPVAG00000014468	POP1	100	85.167	Pteropus_vampyrus
ENSECAG00000024236	POP1	89	49.134	ENSPNYG00000004476	pop1	97	47.889	Pundamilia_nyererei
ENSECAG00000024236	POP1	100	46.716	ENSPNAG00000000265	pop1	100	46.623	Pygocentrus_nattereri
ENSECAG00000024236	POP1	100	75.293	ENSRNOG00000005243	Pop1	100	75.293	Rattus_norvegicus
ENSECAG00000024236	POP1	100	83.105	ENSRBIG00000007996	POP1	100	83.105	Rhinopithecus_bieti
ENSECAG00000024236	POP1	100	83.203	ENSRROG00000012334	POP1	100	83.203	Rhinopithecus_roxellana
ENSECAG00000024236	POP1	99	83.103	ENSSBOG00000020830	POP1	100	83.103	Saimiri_boliviensis_boliviensis
ENSECAG00000024236	POP1	100	67.988	ENSSHAG00000000296	POP1	100	67.988	Sarcophilus_harrisii
ENSECAG00000024236	POP1	100	48.989	ENSSFOG00015007429	pop1	99	48.893	Scleropages_formosus
ENSECAG00000024236	POP1	100	47.098	ENSSDUG00000007817	POP1	100	47.962	Seriola_dumerili
ENSECAG00000024236	POP1	100	47.483	ENSSLDG00000012565	POP1	100	47.958	Seriola_lalandi_dorsalis
ENSECAG00000024236	POP1	100	58.847	ENSSPUG00000003550	-	100	58.847	Sphenodon_punctatus
ENSECAG00000024236	POP1	90	50.649	ENSSPAG00000014955	pop1	94	50.378	Stegastes_partitus
ENSECAG00000024236	POP1	100	82.891	ENSSSCG00000006078	POP1	100	82.891	Sus_scrofa
ENSECAG00000024236	POP1	92	56.748	ENSTGUG00000012011	-	100	56.748	Taeniopygia_guttata
ENSECAG00000024236	POP1	91	49.099	ENSTRUG00000010856	pop1	94	48.990	Takifugu_rubripes
ENSECAG00000024236	POP1	93	47.604	ENSTNIG00000013297	pop1	99	47.857	Tetraodon_nigroviridis
ENSECAG00000024236	POP1	95	77.994	ENSTBEG00000014214	POP1	100	77.994	Tupaia_belangeri
ENSECAG00000024236	POP1	100	82.301	ENSTTRG00000016071	POP1	100	82.301	Tursiops_truncatus
ENSECAG00000024236	POP1	99	80.636	ENSUAMG00000017309	POP1	100	80.636	Ursus_americanus
ENSECAG00000024236	POP1	100	83.138	ENSUMAG00000016952	POP1	100	90.688	Ursus_maritimus
ENSECAG00000024236	POP1	82	89.781	ENSVPAG00000008278	POP1	82	89.781	Vicugna_pacos
ENSECAG00000024236	POP1	100	85.644	ENSVVUG00000010994	POP1	100	85.644	Vulpes_vulpes
ENSECAG00000024236	POP1	100	43.107	ENSXCOG00000017043	POP1	100	42.913	Xiphophorus_couchianus
ENSECAG00000024236	POP1	100	47.082	ENSXMAG00000002472	POP1	100	46.887	Xiphophorus_maculatus