EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000024392 (Gene tree)
Gene ID: 100071185
Gene Symbol: BRIP1
Alias: BACH1|FANCJ|OF
Full Name: BRCA1 interacting protein C-terminal helicase 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 182866 bases
Position: chr11:34580535-34763400
Accession: 20473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000021872	DEAD	PF00270.29	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000059337	BRIP1-201	3666	-	ENSECAP00000025423	1221 (aa)	-	-
ENSECAT00000026236	BRIP1-202	2739	-	ENSECAP00000021872	912 (aa)	-	F6X9Q9

Gene Model

Click here to download ENSECAG00000024392's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03440	Homologous recombination	KEGG
ecb03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000024392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000024392	BRIP1	63	38.782	ENSECAG00000021707	-	51	38.782

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000024392	BRIP1	63	39.362	ENSG00000258366	RTEL1	82	43.103	Homo_sapiens
ENSECAG00000024392	BRIP1	80	34.524	ENSAMEG00000001689	-	56	34.524	Ailuropoda_melanoleuca
ENSECAG00000024392	BRIP1	86	80.513	ENSCJAG00000001292	BRIP1	96	87.022	Callithrix_jacchus
ENSECAG00000024392	BRIP1	62	43.333	ENSCAFG00020001919	-	58	43.333	Canis_lupus_dingo
ENSECAG00000024392	BRIP1	98	80.942	ENSCCAG00000024685	BRIP1	97	86.867	Cebus_capucinus
ENSECAG00000024392	BRIP1	98	94.030	ENSCATG00000041725	BRIP1	76	94.030	Cercocebus_atys
ENSECAG00000024392	BRIP1	80	36.145	ENSCLAG00000005519	-	61	36.145	Chinchilla_lanigera
ENSECAG00000024392	BRIP1	98	83.468	ENSCSAG00000005928	BRIP1	76	83.468	Chlorocebus_sabaeus
ENSECAG00000024392	BRIP1	98	85.075	ENSCPBG00000009376	BRIP1	70	85.075	Chrysemys_picta_bellii
ENSECAG00000024392	BRIP1	67	45.333	ENSCSAVG00000002028	-	87	45.333	Ciona_savignyi
ENSECAG00000024392	BRIP1	98	78.822	ENSCANG00000032026	BRIP1	78	78.822	Colobus_angolensis_palliatus
ENSECAG00000024392	BRIP1	80	36.585	ENSEASG00005023163	-	58	36.585	Equus_asinus_asinus
ENSECAG00000024392	BRIP1	96	85.075	ENSGAGG00000003822	BRIP1	71	85.075	Gopherus_agassizii
ENSECAG00000024392	BRIP1	76	41.379	ENSGAGG00000009493	ERCC2	91	41.379	Gopherus_agassizii
ENSECAG00000024392	BRIP1	80	36.145	ENSHGLG00000005511	-	59	36.145	Heterocephalus_glaber_female
ENSECAG00000024392	BRIP1	80	36.145	ENSHGLG00100002438	-	58	36.145	Heterocephalus_glaber_male
ENSECAG00000024392	BRIP1	98	94.030	ENSMFAG00000044136	BRIP1	74	94.030	Macaca_fascicularis
ENSECAG00000024392	BRIP1	98	94.030	ENSMMUG00000009027	BRIP1	76	94.030	Macaca_mulatta
ENSECAG00000024392	BRIP1	99	94.030	ENSMNEG00000040728	BRIP1	95	94.030	Macaca_nemestrina
ENSECAG00000024392	BRIP1	98	94.030	ENSMLEG00000037601	BRIP1	74	94.030	Mandrillus_leucophaeus
ENSECAG00000024392	BRIP1	77	40.000	ENSPPAG00000033509	-	57	40.000	Pan_paniscus
ENSECAG00000024392	BRIP1	72	33.735	ENSPTRG00000048787	-	56	33.735	Pan_troglodytes
ENSECAG00000024392	BRIP1	98	94.030	ENSPANG00000022169	BRIP1	74	94.030	Papio_anubis
ENSECAG00000024392	BRIP1	63	35.294	ENSPKIG00000006883	ercc2	82	35.294	Paramormyrops_kingsleyae
ENSECAG00000024392	BRIP1	96	88.060	ENSPSIG00000018052	BRIP1	71	88.060	Pelodiscus_sinensis
ENSECAG00000024392	BRIP1	89	30.000	ENSPCIG00000017939	-	61	30.000	Phascolarctos_cinereus
ENSECAG00000024392	BRIP1	80	35.802	ENSPCOG00000013374	-	57	35.802	Propithecus_coquereli
ENSECAG00000024392	BRIP1	98	78.216	ENSRBIG00000024082	BRIP1	78	78.216	Rhinopithecus_bieti
ENSECAG00000024392	BRIP1	87	37.975	ENSRROG00000038795	-	62	37.975	Rhinopithecus_roxellana
ENSECAG00000024392	BRIP1	99	78.739	ENSSBOG00000035665	BRIP1	96	84.499	Saimiri_boliviensis_boliviensis
ENSECAG00000024392	BRIP1	80	34.524	ENSUAMG00000009334	-	69	34.524	Ursus_americanus
ENSECAG00000024392	BRIP1	80	34.524	ENSUMAG00000022059	-	63	34.524	Ursus_maritimus