EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000024424 (Gene tree)
Gene ID: 100073294
Gene Symbol: TNPO1
Alias: -
Full Name: transportin 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 85190 bases
Position: chr14:91961661-92046850
Accession: 24394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000044678	IBN_N	PF03810.19	7.8e-16	1	1
ENSECAP00000032961	IBN_N	PF03810.19	8.6e-16	1	1
ENSECAP00000022136	IBN_N	PF03810.19	9.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000048698	-	3119	-	ENSECAP00000032961	898 (aa)	XP_023473981	UPI000C9E6A4B
ENSECAT00000026526	-	2633	-	ENSECAP00000022136	866 (aa)	-	F6QPI5
ENSECAT00000032704	-	2606	-	ENSECAP00000044678	857 (aa)	-	-

Gene Model

Click here to download ENSECAG00000024424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000024424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000024424	TNPO1	99	85.231	ENSECAG00000013673	TNPO2	99	85.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000024424	TNPO1	100	99.777	ENSG00000083312	TNPO1	100	100.000	Homo_sapiens
ENSECAG00000024424	TNPO1	99	93.820	ENSAPOG00000003453	tnpo1	100	93.820	Acanthochromis_polyacanthus
ENSECAG00000024424	TNPO1	99	98.780	ENSAMEG00000007147	TNPO1	99	98.780	Ailuropoda_melanoleuca
ENSECAG00000024424	TNPO1	86	92.894	ENSACIG00000003711	tnpo1	99	92.894	Amphilophus_citrinellus
ENSECAG00000024424	TNPO1	99	93.933	ENSAOCG00000008154	tnpo1	100	93.933	Amphiprion_ocellaris
ENSECAG00000024424	TNPO1	99	93.933	ENSAPEG00000001112	tnpo1	100	93.933	Amphiprion_percula
ENSECAG00000024424	TNPO1	99	93.483	ENSATEG00000010408	tnpo1	100	93.483	Anabas_testudineus
ENSECAG00000024424	TNPO1	98	92.559	ENSAPLG00000009619	-	97	93.563	Anas_platyrhynchos
ENSECAG00000024424	TNPO1	99	96.629	ENSACAG00000009599	TNPO1	100	96.629	Anolis_carolinensis
ENSECAG00000024424	TNPO1	100	88.307	ENSANAG00000025351	-	100	88.307	Aotus_nancymaae
ENSECAG00000024424	TNPO1	100	99.332	ENSANAG00000022453	-	100	99.332	Aotus_nancymaae
ENSECAG00000024424	TNPO1	99	64.309	ENSANAG00000027118	-	99	64.088	Aotus_nancymaae
ENSECAG00000024424	TNPO1	99	91.573	ENSACLG00000027223	tnpo1	100	91.573	Astatotilapia_calliptera
ENSECAG00000024424	TNPO1	99	92.937	ENSAMXG00000009842	tnpo1	100	92.601	Astyanax_mexicanus
ENSECAG00000024424	TNPO1	100	99.555	ENSBTAG00000007979	TNPO1	100	99.555	Bos_taurus
ENSECAG00000024424	TNPO1	100	99.443	ENSCJAG00000016409	TNPO1	100	99.443	Callithrix_jacchus
ENSECAG00000024424	TNPO1	95	99.650	ENSCAFG00000008081	TNPO1	100	99.650	Canis_familiaris
ENSECAG00000024424	TNPO1	99	96.629	ENSCAFG00020017397	TNPO1	100	96.629	Canis_lupus_dingo
ENSECAG00000024424	TNPO1	100	99.443	ENSCHIG00000023462	TNPO1	100	99.443	Capra_hircus
ENSECAG00000024424	TNPO1	99	95.593	ENSTSYG00000001871	TNPO1	97	98.129	Carlito_syrichta
ENSECAG00000024424	TNPO1	100	99.332	ENSCCAG00000026472	TNPO1	100	99.332	Cebus_capucinus
ENSECAG00000024424	TNPO1	100	99.777	ENSCATG00000043792	TNPO1	100	99.777	Cercocebus_atys
ENSECAG00000024424	TNPO1	100	99.332	ENSCLAG00000016191	TNPO1	100	99.332	Chinchilla_lanigera
ENSECAG00000024424	TNPO1	100	99.666	ENSCSAG00000015616	TNPO1	100	99.666	Chlorocebus_sabaeus
ENSECAG00000024424	TNPO1	94	86.895	ENSCHOG00000001746	TNPO1	100	86.895	Choloepus_hoffmanni
ENSECAG00000024424	TNPO1	99	97.643	ENSCPBG00000000260	TNPO1	94	97.643	Chrysemys_picta_bellii
ENSECAG00000024424	TNPO1	99	75.421	ENSCSAVG00000010981	-	99	75.421	Ciona_savignyi
ENSECAG00000024424	TNPO1	100	99.777	ENSCANG00000004353	TNPO1	100	99.777	Colobus_angolensis_palliatus
ENSECAG00000024424	TNPO1	100	99.443	ENSCGRG00001016580	Tnpo1	100	99.443	Cricetulus_griseus_chok1gshd
ENSECAG00000024424	TNPO1	95	99.532	ENSCGRG00000010366	Tnpo1	100	99.532	Cricetulus_griseus_crigri
ENSECAG00000024424	TNPO1	99	92.247	ENSCSEG00000012674	tnpo1	100	92.247	Cynoglossus_semilaevis
ENSECAG00000024424	TNPO1	99	93.258	ENSCVAG00000001010	tnpo1	100	93.258	Cyprinodon_variegatus
ENSECAG00000024424	TNPO1	99	92.817	ENSDARG00000035390	tnpo1	100	92.480	Danio_rerio
ENSECAG00000024424	TNPO1	99	93.415	ENSDNOG00000006647	TNPO1	100	93.415	Dasypus_novemcinctus
ENSECAG00000024424	TNPO1	92	99.639	ENSDORG00000006476	Tnpo1	100	99.638	Dipodomys_ordii
ENSECAG00000024424	TNPO1	99	57.901	FBgn0035693	CG8219	99	57.449	Drosophila_melanogaster
ENSECAG00000024424	TNPO1	86	99.625	ENSETEG00000017805	TNPO1	90	99.625	Echinops_telfairi
ENSECAG00000024424	TNPO1	94	85.119	ENSEBUG00000001895	tnpo1	100	85.238	Eptatretus_burgeri
ENSECAG00000024424	TNPO1	100	99.777	ENSEASG00005018055	TNPO1	100	99.777	Equus_asinus_asinus
ENSECAG00000024424	TNPO1	99	86.819	ENSELUG00000002821	tnpo1	100	86.383	Esox_lucius
ENSECAG00000024424	TNPO1	100	99.777	ENSFCAG00000013181	TNPO1	100	99.777	Felis_catus
ENSECAG00000024424	TNPO1	99	97.303	ENSFALG00000010292	TNPO1	100	97.303	Ficedula_albicollis
ENSECAG00000024424	TNPO1	100	99.443	ENSFDAG00000013345	TNPO1	100	99.443	Fukomys_damarensis
ENSECAG00000024424	TNPO1	99	93.603	ENSFHEG00000019234	tnpo1	100	93.603	Fundulus_heteroclitus
ENSECAG00000024424	TNPO1	99	89.855	ENSGMOG00000000347	tnpo1	99	89.855	Gadus_morhua
ENSECAG00000024424	TNPO1	100	96.214	ENSGALG00000015014	TNPO1	100	96.629	Gallus_gallus
ENSECAG00000024424	TNPO1	99	92.377	ENSGAFG00000000943	tnpo1	100	92.377	Gambusia_affinis
ENSECAG00000024424	TNPO1	99	92.953	ENSGACG00000015841	tnpo1	99	92.953	Gasterosteus_aculeatus
ENSECAG00000024424	TNPO1	99	97.416	ENSGAGG00000013419	TNPO1	100	97.416	Gopherus_agassizii
ENSECAG00000024424	TNPO1	99	83.017	ENSGGOG00000022535	-	99	83.017	Gorilla_gorilla
ENSECAG00000024424	TNPO1	100	99.777	ENSGGOG00000026800	TNPO1	100	99.777	Gorilla_gorilla
ENSECAG00000024424	TNPO1	99	93.146	ENSHBUG00000008068	tnpo1	100	93.146	Haplochromis_burtoni
ENSECAG00000024424	TNPO1	100	99.109	ENSHGLG00000000970	-	100	99.109	Heterocephalus_glaber_female
ENSECAG00000024424	TNPO1	95	99.065	ENSHGLG00100017090	-	99	99.065	Heterocephalus_glaber_male
ENSECAG00000024424	TNPO1	100	75.390	ENSHGLG00100000963	-	100	74.833	Heterocephalus_glaber_male
ENSECAG00000024424	TNPO1	99	99.441	ENSJJAG00000010244	Tnpo1	97	99.441	Jaculus_jaculus
ENSECAG00000024424	TNPO1	99	93.596	ENSKMAG00000018195	tnpo1	100	93.596	Kryptolebias_marmoratus
ENSECAG00000024424	TNPO1	90	90.136	ENSLBEG00000009521	tnpo1	96	90.136	Labrus_bergylta
ENSECAG00000024424	TNPO1	95	89.302	ENSLACG00000012199	TNPO1	100	89.302	Latimeria_chalumnae
ENSECAG00000024424	TNPO1	99	95.526	ENSLOCG00000011092	tnpo1	98	95.526	Lepisosteus_oculatus
ENSECAG00000024424	TNPO1	96	99.076	ENSLAFG00000011796	TNPO1	100	99.076	Loxodonta_africana
ENSECAG00000024424	TNPO1	100	99.777	ENSMFAG00000003636	TNPO1	100	99.777	Macaca_fascicularis
ENSECAG00000024424	TNPO1	100	99.666	ENSMMUG00000020923	TNPO1	100	99.666	Macaca_mulatta
ENSECAG00000024424	TNPO1	100	99.777	ENSMNEG00000044581	TNPO1	100	99.777	Macaca_nemestrina
ENSECAG00000024424	TNPO1	100	99.777	ENSMLEG00000030740	TNPO1	100	99.777	Mandrillus_leucophaeus
ENSECAG00000024424	TNPO1	99	93.483	ENSMAMG00000001357	tnpo1	100	93.483	Mastacembelus_armatus
ENSECAG00000024424	TNPO1	99	92.921	ENSMZEG00005004913	tnpo1	100	92.921	Maylandia_zebra
ENSECAG00000024424	TNPO1	99	99.330	ENSMAUG00000020550	Tnpo1	100	99.438	Mesocricetus_auratus
ENSECAG00000024424	TNPO1	99	96.047	ENSMICG00000008468	TNPO1	99	96.047	Microcebus_murinus
ENSECAG00000024424	TNPO1	99	98.997	ENSMOCG00000009301	Tnpo1	99	98.997	Microtus_ochrogaster
ENSECAG00000024424	TNPO1	86	92.526	ENSMMOG00000005551	tnpo1	99	92.526	Mola_mola
ENSECAG00000024424	TNPO1	99	97.872	ENSMODG00000001721	TNPO1	80	97.872	Monodelphis_domestica
ENSECAG00000024424	TNPO1	99	92.360	ENSMALG00000009782	tnpo1	100	92.360	Monopterus_albus
ENSECAG00000024424	TNPO1	100	99.220	MGP_CAROLIEiJ_G0018826	Tnpo1	100	99.438	Mus_caroli
ENSECAG00000024424	TNPO1	100	99.443	ENSMUSG00000009470	Tnpo1	100	99.443	Mus_musculus
ENSECAG00000024424	TNPO1	100	99.332	MGP_PahariEiJ_G0015901	Tnpo1	100	99.438	Mus_pahari
ENSECAG00000024424	TNPO1	100	99.220	MGP_SPRETEiJ_G0019708	Tnpo1	100	99.438	Mus_spretus
ENSECAG00000024424	TNPO1	100	99.666	ENSMPUG00000014387	TNPO1	100	99.666	Mustela_putorius_furo
ENSECAG00000024424	TNPO1	95	99.185	ENSMLUG00000016317	TNPO1	100	99.185	Myotis_lucifugus
ENSECAG00000024424	TNPO1	100	99.443	ENSNGAG00000021263	Tnpo1	100	99.443	Nannospalax_galili
ENSECAG00000024424	TNPO1	86	92.765	ENSNBRG00000009998	tnpo1	99	92.765	Neolamprologus_brichardi
ENSECAG00000024424	TNPO1	100	99.777	ENSNLEG00000004572	TNPO1	100	99.777	Nomascus_leucogenys
ENSECAG00000024424	TNPO1	91	92.966	ENSOPRG00000012390	TNPO1	91	92.966	Ochotona_princeps
ENSECAG00000024424	TNPO1	100	99.109	ENSODEG00000001771	TNPO1	100	99.109	Octodon_degus
ENSECAG00000024424	TNPO1	99	92.222	ENSONIG00000011151	tnpo1	99	92.222	Oreochromis_niloticus
ENSECAG00000024424	TNPO1	91	97.805	ENSOANG00000015785	TNPO1	100	97.805	Ornithorhynchus_anatinus
ENSECAG00000024424	TNPO1	95	93.107	ENSOCUG00000013318	TNPO1	100	93.107	Oryctolagus_cuniculus
ENSECAG00000024424	TNPO1	86	92.737	ENSORLG00000003182	tnpo1	99	92.737	Oryzias_latipes
ENSECAG00000024424	TNPO1	99	93.010	ENSORLG00020011559	tnpo1	99	93.010	Oryzias_latipes_hni
ENSECAG00000024424	TNPO1	99	93.123	ENSORLG00015019113	tnpo1	99	93.123	Oryzias_latipes_hsok
ENSECAG00000024424	TNPO1	99	93.010	ENSOMEG00000014567	tnpo1	99	93.010	Oryzias_melastigma
ENSECAG00000024424	TNPO1	100	99.666	ENSOGAG00000000808	TNPO1	100	99.666	Otolemur_garnettii
ENSECAG00000024424	TNPO1	100	99.555	ENSOARG00000005038	TNPO1	84	99.555	Ovis_aries
ENSECAG00000024424	TNPO1	100	99.777	ENSPPAG00000042518	TNPO1	100	99.777	Pan_paniscus
ENSECAG00000024424	TNPO1	100	99.777	ENSPPRG00000022336	TNPO1	100	99.777	Panthera_pardus
ENSECAG00000024424	TNPO1	100	99.777	ENSPTIG00000018839	TNPO1	100	99.777	Panthera_tigris_altaica
ENSECAG00000024424	TNPO1	93	86.740	ENSPTRG00000047731	-	100	86.740	Pan_troglodytes
ENSECAG00000024424	TNPO1	100	99.777	ENSPTRG00000016972	TNPO1	100	99.777	Pan_troglodytes
ENSECAG00000024424	TNPO1	100	99.777	ENSPANG00000006074	TNPO1	100	99.777	Papio_anubis
ENSECAG00000024424	TNPO1	99	90.787	ENSPKIG00000019795	tnpo1	100	90.787	Paramormyrops_kingsleyae
ENSECAG00000024424	TNPO1	100	96.882	ENSPSIG00000014366	TNPO1	100	96.882	Pelodiscus_sinensis
ENSECAG00000024424	TNPO1	99	90.460	ENSPMGG00000017014	tnpo1	100	90.572	Periophthalmus_magnuspinnatus
ENSECAG00000024424	TNPO1	95	99.532	ENSPEMG00000007444	Tnpo1	100	99.532	Peromyscus_maniculatus_bairdii
ENSECAG00000024424	TNPO1	99	98.090	ENSPCIG00000026080	TNPO1	100	98.090	Phascolarctos_cinereus
ENSECAG00000024424	TNPO1	99	93.169	ENSPFOG00000011447	tnpo1	100	93.169	Poecilia_formosa
ENSECAG00000024424	TNPO1	99	93.169	ENSPLAG00000018696	tnpo1	100	93.169	Poecilia_latipinna
ENSECAG00000024424	TNPO1	99	93.371	ENSPMEG00000024121	tnpo1	100	93.371	Poecilia_mexicana
ENSECAG00000024424	TNPO1	99	93.274	ENSPREG00000020705	tnpo1	100	93.274	Poecilia_reticulata
ENSECAG00000024424	TNPO1	100	99.666	ENSPPYG00000015545	TNPO1	100	99.666	Pongo_abelii
ENSECAG00000024424	TNPO1	100	99.666	ENSPCOG00000004254	TNPO1	100	99.666	Propithecus_coquereli
ENSECAG00000024424	TNPO1	100	99.443	ENSPVAG00000013051	TNPO1	100	99.443	Pteropus_vampyrus
ENSECAG00000024424	TNPO1	99	92.929	ENSPNYG00000001522	tnpo1	100	92.929	Pundamilia_nyererei
ENSECAG00000024424	TNPO1	99	92.385	ENSPNAG00000021484	tnpo1	100	92.825	Pygocentrus_nattereri
ENSECAG00000024424	TNPO1	99	99.213	ENSRNOG00000014999	Tnpo1	100	99.213	Rattus_norvegicus
ENSECAG00000024424	TNPO1	100	99.777	ENSRBIG00000021642	TNPO1	100	99.777	Rhinopithecus_bieti
ENSECAG00000024424	TNPO1	100	99.777	ENSRROG00000035271	TNPO1	100	99.777	Rhinopithecus_roxellana
ENSECAG00000024424	TNPO1	100	99.443	ENSSBOG00000029256	TNPO1	100	99.443	Saimiri_boliviensis_boliviensis
ENSECAG00000024424	TNPO1	96	97.569	ENSSHAG00000007120	TNPO1	100	97.569	Sarcophilus_harrisii
ENSECAG00000024424	TNPO1	99	94.725	ENSSFOG00015015448	tnpo1	100	94.725	Scleropages_formosus
ENSECAG00000024424	TNPO1	95	93.341	ENSSMAG00000011202	tnpo1	97	93.341	Scophthalmus_maximus
ENSECAG00000024424	TNPO1	99	93.820	ENSSDUG00000007943	tnpo1	100	93.820	Seriola_dumerili
ENSECAG00000024424	TNPO1	99	93.820	ENSSLDG00000014578	tnpo1	100	93.820	Seriola_lalandi_dorsalis
ENSECAG00000024424	TNPO1	99	96.517	ENSSPUG00000000149	TNPO1	100	96.517	Sphenodon_punctatus
ENSECAG00000024424	TNPO1	99	93.933	ENSSPAG00000000258	tnpo1	100	93.933	Stegastes_partitus
ENSECAG00000024424	TNPO1	99	99.663	ENSSSCG00000027293	TNPO1	100	99.663	Sus_scrofa
ENSECAG00000024424	TNPO1	99	95.089	ENSTGUG00000005729	TNPO1	100	95.089	Taeniopygia_guttata
ENSECAG00000024424	TNPO1	99	92.697	ENSTRUG00000018491	tnpo1	100	92.697	Takifugu_rubripes
ENSECAG00000024424	TNPO1	71	88.799	ENSTNIG00000007483	tnpo1	100	88.799	Tetraodon_nigroviridis
ENSECAG00000024424	TNPO1	86	100.000	ENSTBEG00000007848	TNPO1	86	100.000	Tupaia_belangeri
ENSECAG00000024424	TNPO1	95	95.789	ENSTTRG00000000209	TNPO1	95	95.789	Tursiops_truncatus
ENSECAG00000024424	TNPO1	99	99.775	ENSUMAG00000007635	TNPO1	100	99.775	Ursus_maritimus
ENSECAG00000024424	TNPO1	100	95.768	ENSVPAG00000009601	TNPO1	100	95.768	Vicugna_pacos
ENSECAG00000024424	TNPO1	99	99.775	ENSVVUG00000007338	TNPO1	100	99.775	Vulpes_vulpes
ENSECAG00000024424	TNPO1	99	94.270	ENSXETG00000016812	tnpo1	99	94.270	Xenopus_tropicalis
ENSECAG00000024424	TNPO1	99	93.042	ENSXMAG00000005440	tnpo1	100	93.042	Xiphophorus_maculatus