EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000024544 (Gene tree)
Gene ID: 100050420
Gene Symbol: SF1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 12501 bases
Position: chr12:28619963-28632463
Accession: 22885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000022087	KH_1	PF00013.29	3.4e-07	1	1
ENSECAP00000022087	zf-CCHC	PF00098.23	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000026475	-	1647	-	ENSECAP00000022087	548 (aa)	XP_023510127	F6QXS3

Gene Model

Click here to download ENSECAG00000024544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000024544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000024544	SF1	69	80.928	ENSAPOG00000012341	sf1	60	76.047	Acanthochromis_polyacanthus
ENSECAG00000024544	SF1	95	99.232	ENSAMEG00000017828	SF1	81	99.232	Ailuropoda_melanoleuca
ENSECAG00000024544	SF1	69	80.412	ENSAOCG00000010934	sf1	61	76.112	Amphiprion_ocellaris
ENSECAG00000024544	SF1	69	80.412	ENSAPEG00000009498	sf1	61	76.112	Amphiprion_percula
ENSECAG00000024544	SF1	94	86.047	ENSANAG00000022607	-	88	88.767	Aotus_nancymaae
ENSECAG00000024544	SF1	99	99.259	ENSANAG00000026664	-	96	99.509	Aotus_nancymaae
ENSECAG00000024544	SF1	67	84.553	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSECAG00000024544	SF1	67	85.829	ENSAMXG00000003630	sf1	50	78.973	Astyanax_mexicanus
ENSECAG00000024544	SF1	97	99.433	ENSBTAG00000001035	SF1	83	99.433	Bos_taurus
ENSECAG00000024544	SF1	98	99.814	ENSCJAG00000002780	SF1	83	99.433	Callithrix_jacchus
ENSECAG00000024544	SF1	97	99.433	ENSCAFG00000014239	SF1	83	99.433	Canis_familiaris
ENSECAG00000024544	SF1	97	99.433	ENSCAFG00020014381	SF1	83	99.433	Canis_lupus_dingo
ENSECAG00000024544	SF1	100	99.818	ENSCHIG00000025867	SF1	100	99.818	Capra_hircus
ENSECAG00000024544	SF1	56	98.925	ENSTSYG00000033618	SF1	82	98.925	Carlito_syrichta
ENSECAG00000024544	SF1	80	98.409	ENSCAPG00000010762	SF1	79	98.409	Cavia_aperea
ENSECAG00000024544	SF1	98	99.441	ENSCPOG00000012290	SF1	100	99.441	Cavia_porcellus
ENSECAG00000024544	SF1	98	99.814	ENSCCAG00000037881	SF1	96	99.754	Cebus_capucinus
ENSECAG00000024544	SF1	96	84.820	ENSCCAG00000023781	-	90	87.662	Cebus_capucinus
ENSECAG00000024544	SF1	97	99.433	ENSCATG00000011564	SF1	95	98.737	Cercocebus_atys
ENSECAG00000024544	SF1	100	99.818	ENSCSAG00000007258	SF1	100	99.818	Chlorocebus_sabaeus
ENSECAG00000024544	SF1	75	93.447	ENSCHOG00000006008	SF1	79	93.541	Choloepus_hoffmanni
ENSECAG00000024544	SF1	94	86.460	ENSCPBG00000023763	SF1	66	85.106	Chrysemys_picta_bellii
ENSECAG00000024544	SF1	69	58.115	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSECAG00000024544	SF1	93	53.372	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSECAG00000024544	SF1	97	99.433	ENSCANG00000042201	SF1	91	99.736	Colobus_angolensis_palliatus
ENSECAG00000024544	SF1	97	98.866	ENSCGRG00001003677	Sf1	83	98.866	Cricetulus_griseus_chok1gshd
ENSECAG00000024544	SF1	98	99.069	ENSCGRG00000001708	Sf1	99	99.069	Cricetulus_griseus_crigri
ENSECAG00000024544	SF1	68	84.595	ENSCVAG00000001670	sf1	63	79.218	Cyprinodon_variegatus
ENSECAG00000024544	SF1	71	80.662	ENSDARG00000008188	sf1	72	78.555	Danio_rerio
ENSECAG00000024544	SF1	100	99.270	ENSDNOG00000001282	SF1	100	99.270	Dasypus_novemcinctus
ENSECAG00000024544	SF1	97	99.433	ENSDORG00000016334	Sf1	83	99.433	Dipodomys_ordii
ENSECAG00000024544	SF1	95	91.120	ENSETEG00000012830	SF1	72	91.120	Echinops_telfairi
ENSECAG00000024544	SF1	100	99.818	ENSEASG00005018272	SF1	100	99.818	Equus_asinus_asinus
ENSECAG00000024544	SF1	72	98.982	ENSEEUG00000001058	SF1	100	98.982	Erinaceus_europaeus
ENSECAG00000024544	SF1	67	81.167	ENSELUG00000013225	sf1	54	77.990	Esox_lucius
ENSECAG00000024544	SF1	98	99.814	ENSFCAG00000012231	SF1	83	99.433	Felis_catus
ENSECAG00000024544	SF1	94	96.512	ENSFDAG00000009833	SF1	79	98.864	Fukomys_damarensis
ENSECAG00000024544	SF1	69	80.412	ENSFHEG00000022656	sf1	61	76.334	Fundulus_heteroclitus
ENSECAG00000024544	SF1	60	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSECAG00000024544	SF1	69	84.156	ENSGAFG00000019284	sf1	78	80.476	Gambusia_affinis
ENSECAG00000024544	SF1	70	80.506	ENSGACG00000000826	sf1	68	76.485	Gasterosteus_aculeatus
ENSECAG00000024544	SF1	83	88.791	ENSGAGG00000021691	SF1	72	85.106	Gopherus_agassizii
ENSECAG00000024544	SF1	97	99.433	ENSHGLG00000009541	SF1	83	99.433	Heterocephalus_glaber_female
ENSECAG00000024544	SF1	90	96.748	ENSHGLG00100013879	-	93	96.378	Heterocephalus_glaber_male
ENSECAG00000024544	SF1	84	86.555	ENSHGLG00100008255	-	94	86.134	Heterocephalus_glaber_male
ENSECAG00000024544	SF1	79	89.195	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSECAG00000024544	SF1	69	81.088	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSECAG00000024544	SF1	94	88.975	ENSSTOG00000024353	-	77	88.975	Ictidomys_tridecemlineatus
ENSECAG00000024544	SF1	95	99.421	ENSSTOG00000009790	-	83	99.421	Ictidomys_tridecemlineatus
ENSECAG00000024544	SF1	97	99.244	ENSJJAG00000011788	Sf1	83	99.244	Jaculus_jaculus
ENSECAG00000024544	SF1	68	82.461	ENSLBEG00000019836	sf1	52	86.053	Labrus_bergylta
ENSECAG00000024544	SF1	76	78.095	ENSLACG00000018493	SF1	74	78.313	Latimeria_chalumnae
ENSECAG00000024544	SF1	68	84.615	ENSLOCG00000002130	sf1	59	79.803	Lepisosteus_oculatus
ENSECAG00000024544	SF1	95	99.040	ENSLAFG00000007201	SF1	81	99.040	Loxodonta_africana
ENSECAG00000024544	SF1	97	99.433	ENSMFAG00000033122	SF1	94	98.737	Macaca_fascicularis
ENSECAG00000024544	SF1	100	99.818	ENSMMUG00000022606	SF1	100	99.818	Macaca_mulatta
ENSECAG00000024544	SF1	98	98.895	ENSMNEG00000037901	SF1	94	98.737	Macaca_nemestrina
ENSECAG00000024544	SF1	95	99.422	ENSMLEG00000040706	SF1	94	98.737	Mandrillus_leucophaeus
ENSECAG00000024544	SF1	97	98.866	ENSMAUG00000014064	Sf1	83	98.866	Mesocricetus_auratus
ENSECAG00000024544	SF1	98	99.814	ENSMICG00000001202	SF1	96	99.510	Microcebus_murinus
ENSECAG00000024544	SF1	97	98.677	ENSMOCG00000022038	Sf1	83	98.677	Microtus_ochrogaster
ENSECAG00000024544	SF1	67	81.989	ENSMMOG00000020474	sf1	60	76.642	Mola_mola
ENSECAG00000024544	SF1	82	94.183	ENSMODG00000029407	SF1	97	94.183	Monodelphis_domestica
ENSECAG00000024544	SF1	68	82.888	ENSMALG00000020521	sf1	68	76.359	Monopterus_albus
ENSECAG00000024544	SF1	100	99.270	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSECAG00000024544	SF1	100	99.270	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSECAG00000024544	SF1	100	99.270	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSECAG00000024544	SF1	100	99.270	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSECAG00000024544	SF1	95	99.232	ENSMPUG00000012684	SF1	82	99.232	Mustela_putorius_furo
ENSECAG00000024544	SF1	83	94.311	ENSMLUG00000029800	-	78	94.714	Myotis_lucifugus
ENSECAG00000024544	SF1	95	99.040	ENSMLUG00000015217	-	82	99.040	Myotis_lucifugus
ENSECAG00000024544	SF1	97	99.244	ENSNGAG00000005550	Sf1	83	99.244	Nannospalax_galili
ENSECAG00000024544	SF1	68	83.957	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSECAG00000024544	SF1	96	99.810	ENSNLEG00000005236	-	91	99.736	Nomascus_leucogenys
ENSECAG00000024544	SF1	97	98.305	ENSMEUG00000013424	SF1	100	98.305	Notamacropus_eugenii
ENSECAG00000024544	SF1	90	99.192	ENSOPRG00000005008	SF1	100	99.192	Ochotona_princeps
ENSECAG00000024544	SF1	85	97.430	ENSODEG00000006102	-	81	89.603	Octodon_degus
ENSECAG00000024544	SF1	74	86.453	ENSOANG00000002909	SF1	96	87.468	Ornithorhynchus_anatinus
ENSECAG00000024544	SF1	95	99.232	ENSOCUG00000026486	SF1	83	99.232	Oryctolagus_cuniculus
ENSECAG00000024544	SF1	70	80.818	ENSORLG00000011853	sf1	58	76.978	Oryzias_latipes
ENSECAG00000024544	SF1	71	79.500	ENSORLG00020011834	sf1	60	75.822	Oryzias_latipes_hni
ENSECAG00000024544	SF1	68	80.366	ENSORLG00015012855	sf1	59	76.739	Oryzias_latipes_hsok
ENSECAG00000024544	SF1	97	99.433	ENSOGAG00000016196	SF1	83	99.433	Otolemur_garnettii
ENSECAG00000024544	SF1	96	95.118	ENSOARG00000009166	SF1	97	95.118	Ovis_aries
ENSECAG00000024544	SF1	92	99.404	ENSPPAG00000002799	-	96	99.252	Pan_paniscus
ENSECAG00000024544	SF1	98	99.814	ENSPPRG00000013566	SF1	82	99.404	Panthera_pardus
ENSECAG00000024544	SF1	82	98.210	ENSPTIG00000016141	SF1	80	98.210	Panthera_tigris_altaica
ENSECAG00000024544	SF1	98	99.814	ENSPTRG00000003846	SF1	99	99.765	Pan_troglodytes
ENSECAG00000024544	SF1	100	99.818	ENSPANG00000020754	SF1	100	99.818	Papio_anubis
ENSECAG00000024544	SF1	60	79.279	ENSPKIG00000012116	sf1	88	74.212	Paramormyrops_kingsleyae
ENSECAG00000024544	SF1	64	86.895	ENSPSIG00000003610	SF1	81	81.205	Pelodiscus_sinensis
ENSECAG00000024544	SF1	97	98.866	ENSPEMG00000010463	Sf1	83	98.866	Peromyscus_maniculatus_bairdii
ENSECAG00000024544	SF1	64	69.714	ENSPMAG00000008272	sf1	53	67.209	Petromyzon_marinus
ENSECAG00000024544	SF1	97	98.110	ENSPCIG00000018173	SF1	83	98.110	Phascolarctos_cinereus
ENSECAG00000024544	SF1	69	86.016	ENSPFOG00000013683	sf1	68	81.384	Poecilia_formosa
ENSECAG00000024544	SF1	67	84.127	ENSPLAG00000018076	sf1	61	79.426	Poecilia_latipinna
ENSECAG00000024544	SF1	67	84.127	ENSPMEG00000005726	sf1	62	79.665	Poecilia_mexicana
ENSECAG00000024544	SF1	68	83.202	ENSPREG00000004155	sf1	59	78.947	Poecilia_reticulata
ENSECAG00000024544	SF1	97	99.433	ENSPPYG00000003098	-	99	99.810	Pongo_abelii
ENSECAG00000024544	SF1	98	99.071	ENSPCAG00000013631	SF1	80	99.071	Procavia_capensis
ENSECAG00000024544	SF1	97	99.433	ENSPCOG00000027546	SF1	96	99.510	Propithecus_coquereli
ENSECAG00000024544	SF1	98	99.257	ENSPVAG00000016938	SF1	81	99.257	Pteropus_vampyrus
ENSECAG00000024544	SF1	68	85.185	ENSPNAG00000013072	sf1	59	78.365	Pygocentrus_nattereri
ENSECAG00000024544	SF1	97	98.866	ENSRNOG00000021085	Sf1	97	96.708	Rattus_norvegicus
ENSECAG00000024544	SF1	90	99.593	ENSRBIG00000042818	SF1	92	99.476	Rhinopithecus_bieti
ENSECAG00000024544	SF1	95	99.808	ENSRROG00000045655	SF1	100	99.808	Rhinopithecus_roxellana
ENSECAG00000024544	SF1	53	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSECAG00000024544	SF1	86	83.617	ENSSBOG00000022267	-	99	81.490	Saimiri_boliviensis_boliviensis
ENSECAG00000024544	SF1	74	91.707	ENSSHAG00000006841	SF1	75	92.927	Sarcophilus_harrisii
ENSECAG00000024544	SF1	72	80.050	ENSSFOG00015021978	sf1	55	76.812	Scleropages_formosus
ENSECAG00000024544	SF1	75	76.347	ENSSMAG00000007549	sf1	63	76.761	Scophthalmus_maximus
ENSECAG00000024544	SF1	94	95.551	ENSSARG00000008180	SF1	100	95.551	Sorex_araneus
ENSECAG00000024544	SF1	80	85.185	ENSSPUG00000012907	SF1	86	81.190	Sphenodon_punctatus
ENSECAG00000024544	SF1	69	80.412	ENSSPAG00000019060	sf1	61	76.112	Stegastes_partitus
ENSECAG00000024544	SF1	100	99.635	ENSSSCG00000013021	SF1	100	99.635	Sus_scrofa
ENSECAG00000024544	SF1	97	61.694	ENSTNIG00000004820	sf1	80	69.555	Tetraodon_nigroviridis
ENSECAG00000024544	SF1	84	92.358	ENSTBEG00000013133	SF1	66	92.325	Tupaia_belangeri
ENSECAG00000024544	SF1	98	95.531	ENSTTRG00000008857	SF1	100	95.531	Tursiops_truncatus
ENSECAG00000024544	SF1	75	96.117	ENSUAMG00000011977	SF1	79	95.652	Ursus_americanus
ENSECAG00000024544	SF1	84	99.783	ENSUMAG00000007268	SF1	88	99.782	Ursus_maritimus
ENSECAG00000024544	SF1	65	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSECAG00000024544	SF1	100	99.818	ENSVVUG00000028585	SF1	100	99.818	Vulpes_vulpes
ENSECAG00000024544	SF1	86	75.420	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSECAG00000024544	SF1	67	85.479	ENSXCOG00000003704	sf1	75	81.188	Xiphophorus_couchianus
ENSECAG00000024544	SF1	68	83.641	ENSXMAG00000007822	sf1	61	79.665	Xiphophorus_maculatus