EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSECAG00000024681 (Gene tree)
Gene ID
100065550
Gene Symbol
PUF60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Minus strand
Length
8741 bases
Position
chr9:84595430-84604170
Accession
56322
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000030408RRM_1PF00076.223.2e-4312
ENSECAP00000030408RRM_1PF00076.223.2e-4322
ENSECAP00000028819RRM_1PF00076.223.2e-4312
ENSECAP00000028819RRM_1PF00076.223.2e-4322
ENSECAP00000027122RRM_1PF00076.223.3e-4312
ENSECAP00000027122RRM_1PF00076.223.3e-4322
ENSECAP00000022252RRM_1PF00076.223.7e-4312
ENSECAP00000022252RRM_1PF00076.223.7e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000035358-1614-ENSECAP00000030408537 (aa)--
ENSECAT00000026649-1686XM_023649146ENSECAP00000022252561 (aa)XP_023504914F6SJL8
ENSECAT00000063867-1635XM_023649148ENSECAP00000027122544 (aa)XP_023504916-
ENSECAT00000064334-1617-ENSECAP00000028819538 (aa)--
Gene Model
Click here to download ENSECAG00000024681's gene model file
Pathways
Pathway IDPathway NameSource
ecb03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000024681's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSECAG00000024681PUF606035.294ENSECAG00000010110U2AF26337.255
ENSECAG00000024681PUF605632.432ENSECAG00000020365CELF37833.684
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000024681PUF609999.277ENSG00000179950PUF6010099.612Homo_sapiens
ENSECAG00000024681PUF609885.444ENSAPOG00000001713puf60b9985.606Acanthochromis_polyacanthus
ENSECAG00000024681PUF609997.468ENSAMEG00000006406PUF609997.468Ailuropoda_melanoleuca
ENSECAG00000024681PUF609677.351ENSACIG00000003263-9977.778Amphilophus_citrinellus
ENSECAG00000024681PUF609685.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSECAG00000024681PUF609781.679ENSAOCG00000015558-9981.939Amphiprion_ocellaris
ENSECAG00000024681PUF609885.444ENSAOCG00000005395puf60b10086.372Amphiprion_ocellaris
ENSECAG00000024681PUF609672.745ENSAPEG00000001836-9976.424Amphiprion_percula
ENSECAG00000024681PUF609780.076ENSAPEG00000011923puf60b9982.779Amphiprion_percula
ENSECAG00000024681PUF609880.566ENSATEG00000006303-9981.524Anabas_testudineus
ENSECAG00000024681PUF609785.389ENSATEG00000001730puf60b9985.417Anabas_testudineus
ENSECAG00000024681PUF609798.467ENSAPLG00000010150PUF6010098.467Anas_platyrhynchos
ENSECAG00000024681PUF609796.388ENSACAG00000001645PUF609796.388Anolis_carolinensis
ENSECAG00000024681PUF609999.279ENSANAG00000018626PUF6010099.612Aotus_nancymaae
ENSECAG00000024681PUF609685.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSECAG00000024681PUF609676.449ENSAMXG00000041030puf60b10074.719Astyanax_mexicanus
ENSECAG00000024681PUF609784.299ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSECAG00000024681PUF609999.458ENSBTAG00000037493PUF609999.617Bos_taurus
ENSECAG00000024681PUF607950.162WBGene00004389rnp-68650.962Caenorhabditis_elegans
ENSECAG00000024681PUF609999.281ENSCJAG00000021485PUF609999.281Callithrix_jacchus
ENSECAG00000024681PUF609999.813ENSCAFG00000001400PUF609999.813Canis_familiaris
ENSECAG00000024681PUF609999.819ENSCAFG00020018754PUF609999.819Canis_lupus_dingo
ENSECAG00000024681PUF609999.096ENSCHIG00000001618PUF609299.096Capra_hircus
ENSECAG00000024681PUF609999.281ENSTSYG00000011912PUF60100100.000Carlito_syrichta
ENSECAG00000024681PUF609994.434ENSCPOG00000014613PUF609994.255Cavia_porcellus
ENSECAG00000024681PUF609999.279ENSCCAG00000007744PUF609999.279Cebus_capucinus
ENSECAG00000024681PUF609999.277ENSCATG00000035405PUF609999.277Cercocebus_atys
ENSECAG00000024681PUF609999.281ENSCLAG00000009154PUF609999.281Chinchilla_lanigera
ENSECAG00000024681PUF609699.612ENSCSAG00000008878PUF6010099.612Chlorocebus_sabaeus
ENSECAG00000024681PUF609898.473ENSCPBG00000005595PUF609998.473Chrysemys_picta_bellii
ENSECAG00000024681PUF609848.066ENSCING00000008436-9948.045Ciona_intestinalis
ENSECAG00000024681PUF606159.882ENSCING00000002156-8763.043Ciona_intestinalis
ENSECAG00000024681PUF609455.556ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSECAG00000024681PUF609449.605ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSECAG00000024681PUF608099.085ENSCANG00000041843PUF6010099.520Colobus_angolensis_palliatus
ENSECAG00000024681PUF609998.561ENSCGRG00001017442Puf609998.561Cricetulus_griseus_chok1gshd
ENSECAG00000024681PUF609997.662ENSCGRG00000003717Puf609997.662Cricetulus_griseus_crigri
ENSECAG00000024681PUF609784.820ENSCSEG00000019887puf60b9384.630Cynoglossus_semilaevis
ENSECAG00000024681PUF609772.106ENSCSEG00000014845-8977.273Cynoglossus_semilaevis
ENSECAG00000024681PUF609684.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSECAG00000024681PUF608880.000ENSCVAG00000001560-9879.747Cyprinodon_variegatus
ENSECAG00000024681PUF609686.932ENSDARG00000032175puf60a9994.043Danio_rerio
ENSECAG00000024681PUF609678.947ENSDARG00000001241puf60b9996.032Danio_rerio
ENSECAG00000024681PUF609981.688ENSDNOG00000043278PUF609881.688Dasypus_novemcinctus
ENSECAG00000024681PUF609999.277ENSDORG00000004585Puf6010099.277Dipodomys_ordii
ENSECAG00000024681PUF608162.034FBgn0028577hfp9951.009Drosophila_melanogaster
ENSECAG00000024681PUF609470.040ENSEBUG00000005470-8872.222Eptatretus_burgeri
ENSECAG00000024681PUF609760.672ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSECAG00000024681PUF609999.819ENSEASG00005009695PUF609999.819Equus_asinus_asinus
ENSECAG00000024681PUF609783.460ENSELUG00000006507puf60b9980.403Esox_lucius
ENSECAG00000024681PUF609785.227ENSELUG00000018443-9985.799Esox_lucius
ENSECAG00000024681PUF609999.101ENSFCAG00000001045PUF6010099.612Felis_catus
ENSECAG00000024681PUF609984.991ENSFALG00000001136PUF6010086.116Ficedula_albicollis
ENSECAG00000024681PUF609998.921ENSFDAG00000017177PUF609998.921Fukomys_damarensis
ENSECAG00000024681PUF609884.121ENSFHEG00000020046puf60b10086.180Fundulus_heteroclitus
ENSECAG00000024681PUF609279.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSECAG00000024681PUF609771.805ENSGMOG00000006392puf60b10071.053Gadus_morhua
ENSECAG00000024681PUF606498.547ENSGALG00000039901PUF609498.547Gallus_gallus
ENSECAG00000024681PUF609679.537ENSGAFG00000004334-9979.042Gambusia_affinis
ENSECAG00000024681PUF609883.365ENSGAFG00000021040puf60b10085.605Gambusia_affinis
ENSECAG00000024681PUF609869.962ENSGACG00000001484-10069.423Gasterosteus_aculeatus
ENSECAG00000024681PUF609773.396ENSGACG00000004717puf60b9972.727Gasterosteus_aculeatus
ENSECAG00000024681PUF609898.473ENSGAGG00000013289PUF609298.473Gopherus_agassizii
ENSECAG00000024681PUF609999.277ENSGGOG00000004646PUF6010098.679Gorilla_gorilla
ENSECAG00000024681PUF609881.203ENSHBUG00000009634-10082.738Haplochromis_burtoni
ENSECAG00000024681PUF609884.499ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSECAG00000024681PUF609998.921ENSHGLG00000006111PUF609998.921Heterocephalus_glaber_female
ENSECAG00000024681PUF609998.921ENSHGLG00100012362PUF609998.921Heterocephalus_glaber_male
ENSECAG00000024681PUF609682.440ENSHCOG00000015541puf60b10081.734Hippocampus_comes
ENSECAG00000024681PUF609466.798ENSHCOG00000000378-10064.564Hippocampus_comes
ENSECAG00000024681PUF609682.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSECAG00000024681PUF609678.759ENSIPUG00000004660puf60b9978.531Ictalurus_punctatus
ENSECAG00000024681PUF609999.277ENSSTOG00000025037PUF609999.277Ictidomys_tridecemlineatus
ENSECAG00000024681PUF609999.278ENSJJAG00000001076Puf609999.278Jaculus_jaculus
ENSECAG00000024681PUF609678.450ENSKMAG00000010106-10075.933Kryptolebias_marmoratus
ENSECAG00000024681PUF609685.029ENSKMAG00000016745puf60b10086.180Kryptolebias_marmoratus
ENSECAG00000024681PUF609783.117ENSLBEG00000012505puf60b10083.493Labrus_bergylta
ENSECAG00000024681PUF606790.909ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSECAG00000024681PUF609890.323ENSLOCG00000010106puf60b9989.544Lepisosteus_oculatus
ENSECAG00000024681PUF609997.107ENSLAFG00000022929PUF609997.107Loxodonta_africana
ENSECAG00000024681PUF609999.277ENSMFAG00000043373PUF609999.617Macaca_fascicularis
ENSECAG00000024681PUF609999.458ENSMMUG00000013558PUF6010098.679Macaca_mulatta
ENSECAG00000024681PUF609999.277ENSMNEG00000031099PUF609999.277Macaca_nemestrina
ENSECAG00000024681PUF609699.612ENSMLEG00000040009PUF6010099.612Mandrillus_leucophaeus
ENSECAG00000024681PUF609882.143ENSMAMG00000019476-9982.163Mastacembelus_armatus
ENSECAG00000024681PUF609785.199ENSMAMG00000010394puf60b10083.738Mastacembelus_armatus
ENSECAG00000024681PUF609881.391ENSMZEG00005019425-9981.973Maylandia_zebra
ENSECAG00000024681PUF609685.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSECAG00000024681PUF609798.467ENSMGAG00000013070PUF609898.467Meleagris_gallopavo
ENSECAG00000024681PUF609280.361ENSMAUG00000018549-9583.437Mesocricetus_auratus
ENSECAG00000024681PUF607198.500ENSMAUG00000014267-9898.500Mesocricetus_auratus
ENSECAG00000024681PUF609999.277ENSMICG00000012226PUF6099100.000Microcebus_murinus
ENSECAG00000024681PUF609998.741ENSMOCG00000018780Puf609998.741Microtus_ochrogaster
ENSECAG00000024681PUF609773.129ENSMMOG00000018059-9976.712Mola_mola
ENSECAG00000024681PUF609685.797ENSMMOG00000004217puf60b10085.797Mola_mola
ENSECAG00000024681PUF609997.932ENSMODG00000009161PUF609997.761Monodelphis_domestica
ENSECAG00000024681PUF609880.075ENSMALG00000000200-9979.245Monopterus_albus
ENSECAG00000024681PUF609777.799ENSMALG00000006797puf60b9977.841Monopterus_albus
ENSECAG00000024681PUF609998.561MGP_CAROLIEiJ_G0019910Puf609998.561Mus_caroli
ENSECAG00000024681PUF609998.561ENSMUSG00000002524Puf609998.561Mus_musculus
ENSECAG00000024681PUF609998.561MGP_PahariEiJ_G0019920Puf609998.561Mus_pahari
ENSECAG00000024681PUF609998.561MGP_SPRETEiJ_G0020812Puf609998.561Mus_spretus
ENSECAG00000024681PUF609998.211ENSMPUG00000008137PUF609898.211Mustela_putorius_furo
ENSECAG00000024681PUF609998.373ENSMLUG00000000238-9898.373Myotis_lucifugus
ENSECAG00000024681PUF609792.352ENSMLUG00000013032-9895.446Myotis_lucifugus
ENSECAG00000024681PUF609998.921ENSNGAG00000000712Puf6010099.419Nannospalax_galili
ENSECAG00000024681PUF608181.737ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSECAG00000024681PUF609881.579ENSNBRG00000017223-9982.129Neolamprologus_brichardi
ENSECAG00000024681PUF609999.277ENSNLEG00000002156PUF6010098.679Nomascus_leucogenys
ENSECAG00000024681PUF607299.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSECAG00000024681PUF609474.162ENSODEG00000015513-9971.429Octodon_degus
ENSECAG00000024681PUF6073100.000ENSODEG00000014024-98100.000Octodon_degus
ENSECAG00000024681PUF609881.955ENSONIG00000014030-9981.955Oreochromis_niloticus
ENSECAG00000024681PUF609784.630ENSONIG00000006247puf60b9984.659Oreochromis_niloticus
ENSECAG00000024681PUF609578.669ENSOANG00000006962PUF609978.516Ornithorhynchus_anatinus
ENSECAG00000024681PUF609884.688ENSORLG00000012279puf60b10085.029Oryzias_latipes
ENSECAG00000024681PUF609678.788ENSORLG00000028655-9978.897Oryzias_latipes
ENSECAG00000024681PUF609884.688ENSORLG00020007333puf6010085.029Oryzias_latipes_hni
ENSECAG00000024681PUF609878.131ENSORLG00020018144-9978.236Oryzias_latipes_hni
ENSECAG00000024681PUF609883.804ENSORLG00015007718puf60b10084.895Oryzias_latipes_hsok
ENSECAG00000024681PUF609678.977ENSORLG00015016833-9879.087Oryzias_latipes_hsok
ENSECAG00000024681PUF609879.135ENSOMEG00000022185-9979.135Oryzias_melastigma
ENSECAG00000024681PUF609882.407ENSOMEG00000001643puf60b9983.232Oryzias_melastigma
ENSECAG00000024681PUF609999.458ENSOGAG00000006259PUF609999.458Otolemur_garnettii
ENSECAG00000024681PUF609896.212ENSOARG00000016235PUF609997.132Ovis_aries
ENSECAG00000024681PUF609999.277ENSPPAG00000029933PUF609999.277Pan_paniscus
ENSECAG00000024681PUF609999.101ENSPPRG00000003257PUF6010099.612Panthera_pardus
ENSECAG00000024681PUF609998.881ENSPTIG00000009795PUF609997.318Panthera_tigris_altaica
ENSECAG00000024681PUF609999.096ENSPTRG00000043963-10098.491Pan_troglodytes
ENSECAG00000024681PUF609999.096ENSPTRG00000020670PUF609999.096Pan_troglodytes
ENSECAG00000024681PUF609999.277ENSPANG00000021936PUF609999.277Papio_anubis
ENSECAG00000024681PUF609885.876ENSPKIG00000004295puf60a9992.647Paramormyrops_kingsleyae
ENSECAG00000024681PUF609787.262ENSPKIG00000012204puf60b10088.077Paramormyrops_kingsleyae
ENSECAG00000024681PUF609798.276ENSPSIG00000004679PUF609998.279Pelodiscus_sinensis
ENSECAG00000024681PUF609684.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSECAG00000024681PUF609998.741ENSPEMG00000008820Puf609998.741Peromyscus_maniculatus_bairdii
ENSECAG00000024681PUF609899.429ENSPCIG00000020270PUF609999.616Phascolarctos_cinereus
ENSECAG00000024681PUF609884.121ENSPFOG00000019217puf60b10084.825Poecilia_formosa
ENSECAG00000024681PUF609879.623ENSPFOG00000011118-9979.962Poecilia_formosa
ENSECAG00000024681PUF609879.623ENSPLAG00000017025-9279.584Poecilia_latipinna
ENSECAG00000024681PUF609685.029ENSPLAG00000010754puf60b10086.180Poecilia_latipinna
ENSECAG00000024681PUF609879.623ENSPMEG00000009767-9279.962Poecilia_mexicana
ENSECAG00000024681PUF609884.121ENSPMEG00000000838puf60b10086.180Poecilia_mexicana
ENSECAG00000024681PUF609881.400ENSPREG00000005440puf60b10083.929Poecilia_reticulata
ENSECAG00000024681PUF607897.842ENSPPYG00000018951-9597.842Pongo_abelii
ENSECAG00000024681PUF607899.760ENSPCAG00000014837PUF6010099.760Procavia_capensis
ENSECAG00000024681PUF609999.819ENSPCOG00000027981PUF609999.819Propithecus_coquereli
ENSECAG00000024681PUF6096100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSECAG00000024681PUF609881.391ENSPNYG00000004273-9981.973Pundamilia_nyererei
ENSECAG00000024681PUF609685.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSECAG00000024681PUF609976.111ENSPNAG00000019415puf60b9176.699Pygocentrus_nattereri
ENSECAG00000024681PUF609683.365ENSPNAG00000019909puf60a9984.961Pygocentrus_nattereri
ENSECAG00000024681PUF609998.516ENSRNOG00000009960Puf609998.559Rattus_norvegicus
ENSECAG00000024681PUF609999.277ENSRBIG00000035274PUF6010098.679Rhinopithecus_bieti
ENSECAG00000024681PUF609999.277ENSRROG00000029360PUF609999.617Rhinopithecus_roxellana
ENSECAG00000024681PUF609898.286ENSSBOG00000027089PUF609998.286Saimiri_boliviensis_boliviensis
ENSECAG00000024681PUF608997.708ENSSHAG00000006668PUF609597.006Sarcophilus_harrisii
ENSECAG00000024681PUF609286.437ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSECAG00000024681PUF609881.408ENSSFOG00015019371puf60a9887.324Scleropages_formosus
ENSECAG00000024681PUF607094.224ENSSMAG00000016381puf60b7294.224Scophthalmus_maximus
ENSECAG00000024681PUF609779.773ENSSDUG00000007048-9979.962Seriola_dumerili
ENSECAG00000024681PUF609783.488ENSSDUG00000009935puf60b10083.488Seriola_dumerili
ENSECAG00000024681PUF609785.551ENSSLDG00000024011puf60b10083.925Seriola_lalandi_dorsalis
ENSECAG00000024681PUF609680.455ENSSLDG00000007366-9980.835Seriola_lalandi_dorsalis
ENSECAG00000024681PUF606386.431ENSSPUG00000013518PUF609485.260Sphenodon_punctatus
ENSECAG00000024681PUF609682.061ENSSPAG00000020285-10082.634Stegastes_partitus
ENSECAG00000024681PUF609882.689ENSSPAG00000012144puf60b10084.112Stegastes_partitus
ENSECAG00000024681PUF609998.032ENSSSCG00000038800PUF609899.208Sus_scrofa
ENSECAG00000024681PUF609795.211ENSTGUG00000012797-10095.211Taeniopygia_guttata
ENSECAG00000024681PUF609784.250ENSTRUG00000005420puf60b10082.804Takifugu_rubripes
ENSECAG00000024681PUF609677.713ENSTRUG00000008843-10080.361Takifugu_rubripes
ENSECAG00000024681PUF609778.269ENSTNIG00000003069-10078.011Tetraodon_nigroviridis
ENSECAG00000024681PUF609784.250ENSTNIG00000013675puf60b10084.091Tetraodon_nigroviridis
ENSECAG00000024681PUF606096.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSECAG00000024681PUF607881.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSECAG00000024681PUF609699.031ENSTTRG00000017088PUF6010099.031Tursiops_truncatus
ENSECAG00000024681PUF609999.458ENSUAMG00000024917PUF609999.458Ursus_americanus
ENSECAG00000024681PUF609795.211ENSUMAG00000000272PUF609994.213Ursus_maritimus
ENSECAG00000024681PUF609999.458ENSVVUG00000022527PUF60100100.000Vulpes_vulpes
ENSECAG00000024681PUF609893.524ENSXETG00000012469puf609994.643Xenopus_tropicalis
ENSECAG00000024681PUF609681.766ENSXCOG00000012355puf60b10085.714Xiphophorus_couchianus
ENSECAG00000024681PUF609778.161ENSXMAG00000010507-9979.724Xiphophorus_maculatus
ENSECAG00000024681PUF609884.121ENSXMAG00000001862puf60b10086.180Xiphophorus_maculatus

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