EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000025030 (Gene tree)
Gene ID: 100058375
Gene Symbol: PATZ1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 16437 bases
Position: chr8:7833610-7850046
Accession: 21175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000030786	zf-C2H2	PF00096.26	3.2e-26	1	5
ENSECAP00000030786	zf-C2H2	PF00096.26	3.2e-26	2	5
ENSECAP00000030786	zf-C2H2	PF00096.26	3.2e-26	3	5
ENSECAP00000030786	zf-C2H2	PF00096.26	3.2e-26	4	5
ENSECAP00000030786	zf-C2H2	PF00096.26	3.2e-26	5	5
ENSECAP00000026810	zf-C2H2	PF00096.26	6.4e-20	1	4
ENSECAP00000026810	zf-C2H2	PF00096.26	6.4e-20	2	4
ENSECAP00000026810	zf-C2H2	PF00096.26	6.4e-20	3	4
ENSECAP00000026810	zf-C2H2	PF00096.26	6.4e-20	4	4
ENSECAP00000022604	zf-C2H2	PF00096.26	1.8e-15	1	3
ENSECAP00000022604	zf-C2H2	PF00096.26	1.8e-15	2	3
ENSECAP00000022604	zf-C2H2	PF00096.26	1.8e-15	3	3
ENSECAP00000044168	zf-C2H2	PF00096.26	2.1e-15	1	3
ENSECAP00000044168	zf-C2H2	PF00096.26	2.1e-15	2	3
ENSECAP00000044168	zf-C2H2	PF00096.26	2.1e-15	3	3
ENSECAP00000030786	zf-met	PF12874.7	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000055522	-	1926	-	ENSECAP00000026810	641 (aa)	XP_001497029	UPI000155ED29
ENSECAT00000050752	-	2064	-	ENSECAP00000030786	687 (aa)	XP_003365498	UPI000155ED08
ENSECAT00000027023	-	1599	-	ENSECAP00000022604	516 (aa)	-	F6QU89
ENSECAT00000038632	-	1614	-	ENSECAP00000044168	537 (aa)	XP_003365497	UPI000214B5CB

Gene Model

Click here to download ENSECAG00000025030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000025030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000025030	PATZ1	79	31.288	ENSECAG00000020244	ZBTB47	55	31.481
ENSECAG00000025030	PATZ1	56	31.381	ENSECAG00000011516	PRDM5	57	43.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000025030	PATZ1	100	99.220	ENSG00000100105	PATZ1	100	99.220	Homo_sapiens
ENSECAG00000025030	PATZ1	99	60.038	ENSAPOG00000018447	patz1	100	57.478	Acanthochromis_polyacanthus
ENSECAG00000025030	PATZ1	100	99.418	ENSAMEG00000007074	PATZ1	100	99.418	Ailuropoda_melanoleuca
ENSECAG00000025030	PATZ1	100	60.232	ENSACIG00000016779	patz1	100	59.961	Amphilophus_citrinellus
ENSECAG00000025030	PATZ1	100	57.703	ENSAPEG00000013354	patz1	100	57.843	Amphiprion_percula
ENSECAG00000025030	PATZ1	100	62.549	ENSATEG00000011260	patz1	100	62.353	Anabas_testudineus
ENSECAG00000025030	PATZ1	85	91.610	ENSAPLG00000003934	PATZ1	99	91.438	Anas_platyrhynchos
ENSECAG00000025030	PATZ1	100	99.220	ENSANAG00000029603	PATZ1	100	99.220	Aotus_nancymaae
ENSECAG00000025030	PATZ1	97	62.524	ENSAMXG00000002273	patz1	98	62.147	Astyanax_mexicanus
ENSECAG00000025030	PATZ1	100	99.418	ENSBTAG00000005478	PATZ1	100	99.418	Bos_taurus
ENSECAG00000025030	PATZ1	100	99.220	ENSCJAG00000010978	PATZ1	100	99.220	Callithrix_jacchus
ENSECAG00000025030	PATZ1	100	99.563	ENSCAFG00000013087	PATZ1	100	99.563	Canis_familiaris
ENSECAG00000025030	PATZ1	100	98.981	ENSCHIG00000020203	PATZ1	100	98.981	Capra_hircus
ENSECAG00000025030	PATZ1	100	99.127	ENSTSYG00000033183	PATZ1	100	99.127	Carlito_syrichta
ENSECAG00000025030	PATZ1	100	99.220	ENSCCAG00000028772	PATZ1	100	99.220	Cebus_capucinus
ENSECAG00000025030	PATZ1	100	99.220	ENSCATG00000006101	PATZ1	100	99.220	Cercocebus_atys
ENSECAG00000025030	PATZ1	100	89.275	ENSCPBG00000011277	PATZ1	100	88.986	Chrysemys_picta_bellii
ENSECAG00000025030	PATZ1	100	99.220	ENSCANG00000024972	PATZ1	100	99.220	Colobus_angolensis_palliatus
ENSECAG00000025030	PATZ1	100	96.943	ENSCGRG00001004071	Patz1	100	96.943	Cricetulus_griseus_chok1gshd
ENSECAG00000025030	PATZ1	93	97.823	ENSCGRG00000004814	Patz1	100	97.823	Cricetulus_griseus_crigri
ENSECAG00000025030	PATZ1	100	55.105	ENSCSEG00000001385	patz1	100	55.139	Cynoglossus_semilaevis
ENSECAG00000025030	PATZ1	100	58.997	ENSCVAG00000007684	patz1	100	58.936	Cyprinodon_variegatus
ENSECAG00000025030	PATZ1	97	60.679	ENSDARG00000076584	patz1	98	58.815	Danio_rerio
ENSECAG00000025030	PATZ1	90	99.031	ENSDNOG00000003183	PATZ1	100	99.031	Dasypus_novemcinctus
ENSECAG00000025030	PATZ1	100	99.272	ENSDORG00000023834	Patz1	100	99.272	Dipodomys_ordii
ENSECAG00000025030	PATZ1	99	61.887	ENSELUG00000002333	patz1	100	58.023	Esox_lucius
ENSECAG00000025030	PATZ1	100	99.563	ENSFCAG00000030253	PATZ1	100	99.563	Felis_catus
ENSECAG00000025030	PATZ1	86	91.864	ENSFALG00000007450	PATZ1	99	91.823	Ficedula_albicollis
ENSECAG00000025030	PATZ1	96	97.856	ENSFDAG00000005614	PATZ1	100	97.856	Fukomys_damarensis
ENSECAG00000025030	PATZ1	100	57.918	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSECAG00000025030	PATZ1	98	55.230	ENSGMOG00000001062	patz1	98	54.848	Gadus_morhua
ENSECAG00000025030	PATZ1	100	88.921	ENSGALG00000006934	PATZ1	100	88.921	Gallus_gallus
ENSECAG00000025030	PATZ1	100	59.029	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSECAG00000025030	PATZ1	85	91.938	ENSGAGG00000003214	PATZ1	100	91.767	Gopherus_agassizii
ENSECAG00000025030	PATZ1	100	99.376	ENSGGOG00000017171	PATZ1	100	99.376	Gorilla_gorilla
ENSECAG00000025030	PATZ1	98	62.846	ENSHCOG00000017644	patz1	93	57.988	Hippocampus_comes
ENSECAG00000025030	PATZ1	97	60.285	ENSIPUG00000017653	patz1	97	53.901	Ictalurus_punctatus
ENSECAG00000025030	PATZ1	100	99.220	ENSSTOG00000020707	PATZ1	100	99.220	Ictidomys_tridecemlineatus
ENSECAG00000025030	PATZ1	100	96.807	ENSJJAG00000015259	Patz1	100	96.807	Jaculus_jaculus
ENSECAG00000025030	PATZ1	100	57.670	ENSKMAG00000008157	patz1	100	57.627	Kryptolebias_marmoratus
ENSECAG00000025030	PATZ1	100	98.544	ENSLAFG00000002317	PATZ1	100	98.544	Loxodonta_africana
ENSECAG00000025030	PATZ1	100	99.064	ENSMFAG00000040968	PATZ1	100	99.064	Macaca_fascicularis
ENSECAG00000025030	PATZ1	100	99.064	ENSMNEG00000037588	PATZ1	100	99.064	Macaca_nemestrina
ENSECAG00000025030	PATZ1	100	99.220	ENSMLEG00000030938	PATZ1	100	99.220	Mandrillus_leucophaeus
ENSECAG00000025030	PATZ1	100	57.625	ENSMAMG00000023652	patz1	100	57.771	Mastacembelus_armatus
ENSECAG00000025030	PATZ1	85	88.034	ENSMGAG00000008439	PATZ1	100	87.863	Meleagris_gallopavo
ENSECAG00000025030	PATZ1	100	98.752	ENSMAUG00000004129	Patz1	100	98.752	Mesocricetus_auratus
ENSECAG00000025030	PATZ1	100	99.127	ENSMICG00000005430	PATZ1	100	99.127	Microcebus_murinus
ENSECAG00000025030	PATZ1	100	98.596	ENSMOCG00000014488	Patz1	100	98.596	Microtus_ochrogaster
ENSECAG00000025030	PATZ1	99	55.469	ENSMMOG00000021679	patz1	100	54.867	Mola_mola
ENSECAG00000025030	PATZ1	100	57.001	ENSMALG00000021172	patz1	100	56.719	Monopterus_albus
ENSECAG00000025030	PATZ1	100	98.596	MGP_CAROLIEiJ_G0016007	Patz1	100	98.596	Mus_caroli
ENSECAG00000025030	PATZ1	100	98.752	ENSMUSG00000020453	Patz1	100	98.752	Mus_musculus
ENSECAG00000025030	PATZ1	100	98.752	MGP_PahariEiJ_G0016884	Patz1	100	98.752	Mus_pahari
ENSECAG00000025030	PATZ1	100	98.752	MGP_SPRETEiJ_G0016846	Patz1	100	98.752	Mus_spretus
ENSECAG00000025030	PATZ1	100	99.272	ENSMLUG00000009942	PATZ1	100	99.272	Myotis_lucifugus
ENSECAG00000025030	PATZ1	100	99.064	ENSNGAG00000010268	Patz1	100	99.064	Nannospalax_galili
ENSECAG00000025030	PATZ1	100	60.039	ENSNBRG00000016032	patz1	100	59.768	Neolamprologus_brichardi
ENSECAG00000025030	PATZ1	68	93.978	ENSMEUG00000016293	PATZ1	99	93.966	Notamacropus_eugenii
ENSECAG00000025030	PATZ1	100	98.399	ENSODEG00000003589	PATZ1	100	98.399	Octodon_degus
ENSECAG00000025030	PATZ1	100	58.918	ENSONIG00000004248	patz1	100	58.712	Oreochromis_niloticus
ENSECAG00000025030	PATZ1	100	93.324	ENSOANG00000014654	PATZ1	100	93.614	Ornithorhynchus_anatinus
ENSECAG00000025030	PATZ1	100	58.779	ENSORLG00020010937	patz1	100	58.626	Oryzias_latipes_hni
ENSECAG00000025030	PATZ1	100	58.150	ENSORLG00015007396	patz1	100	58.003	Oryzias_latipes_hsok
ENSECAG00000025030	PATZ1	100	57.459	ENSOMEG00000006636	patz1	100	57.459	Oryzias_melastigma
ENSECAG00000025030	PATZ1	100	99.272	ENSOGAG00000027905	PATZ1	100	99.272	Otolemur_garnettii
ENSECAG00000025030	PATZ1	100	99.376	ENSPPAG00000033227	PATZ1	100	99.376	Pan_paniscus
ENSECAG00000025030	PATZ1	100	99.563	ENSPPRG00000001573	PATZ1	100	99.563	Panthera_pardus
ENSECAG00000025030	PATZ1	86	99.663	ENSPTIG00000007937	PATZ1	91	99.663	Panthera_tigris_altaica
ENSECAG00000025030	PATZ1	100	99.376	ENSPTRG00000014268	PATZ1	100	99.376	Pan_troglodytes
ENSECAG00000025030	PATZ1	100	99.220	ENSPANG00000006821	PATZ1	100	99.127	Papio_anubis
ENSECAG00000025030	PATZ1	100	62.313	ENSPKIG00000019584	patz1	100	61.567	Paramormyrops_kingsleyae
ENSECAG00000025030	PATZ1	58	95.707	ENSPSIG00000011562	-	100	96.000	Pelodiscus_sinensis
ENSECAG00000025030	PATZ1	60	83.535	ENSPSIG00000016553	-	91	83.293	Pelodiscus_sinensis
ENSECAG00000025030	PATZ1	100	57.022	ENSPMGG00000010196	patz1	100	57.022	Periophthalmus_magnuspinnatus
ENSECAG00000025030	PATZ1	100	98.752	ENSPEMG00000005321	Patz1	100	98.752	Peromyscus_maniculatus_bairdii
ENSECAG00000025030	PATZ1	100	57.478	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSECAG00000025030	PATZ1	100	57.562	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSECAG00000025030	PATZ1	100	57.044	ENSPREG00000002440	patz1	100	57.182	Poecilia_reticulata
ENSECAG00000025030	PATZ1	100	99.031	ENSPPYG00000011732	PATZ1	100	99.031	Pongo_abelii
ENSECAG00000025030	PATZ1	100	98.981	ENSPCOG00000019729	PATZ1	100	98.981	Propithecus_coquereli
ENSECAG00000025030	PATZ1	100	99.418	ENSPVAG00000001749	PATZ1	100	99.418	Pteropus_vampyrus
ENSECAG00000025030	PATZ1	100	59.384	ENSPNYG00000013542	patz1	100	59.046	Pundamilia_nyererei
ENSECAG00000025030	PATZ1	84	60.130	ENSPNAG00000017222	patz1	99	59.164	Pygocentrus_nattereri
ENSECAG00000025030	PATZ1	100	99.220	ENSRBIG00000044231	PATZ1	100	99.220	Rhinopithecus_bieti
ENSECAG00000025030	PATZ1	100	99.220	ENSRROG00000037155	PATZ1	100	99.220	Rhinopithecus_roxellana
ENSECAG00000025030	PATZ1	100	99.220	ENSSBOG00000003894	PATZ1	100	99.220	Saimiri_boliviensis_boliviensis
ENSECAG00000025030	PATZ1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSECAG00000025030	PATZ1	100	86.913	ENSSPUG00000015298	PATZ1	100	86.629	Sphenodon_punctatus
ENSECAG00000025030	PATZ1	85	99.141	ENSSSCG00000010027	PATZ1	100	99.141	Sus_scrofa
ENSECAG00000025030	PATZ1	100	58.379	ENSTRUG00000015366	patz1	100	57.793	Takifugu_rubripes
ENSECAG00000025030	PATZ1	100	99.418	ENSTTRG00000010279	PATZ1	100	99.418	Tursiops_truncatus
ENSECAG00000025030	PATZ1	100	99.532	ENSUAMG00000015014	PATZ1	100	99.532	Ursus_americanus
ENSECAG00000025030	PATZ1	100	72.899	ENSXETG00000004190	patz1	100	72.174	Xenopus_tropicalis
ENSECAG00000025030	PATZ1	100	57.856	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus