EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000025043 (Gene tree)
Gene ID: 100059711
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 64530 bases
Position: chr2:44607584-44672113
Accession: 16487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000035739	ResIII	PF04851.15	4.8e-08	1	1
ENSECAP00000044804	ResIII	PF04851.15	7.2e-08	1	1
ENSECAP00000022667	ResIII	PF04851.15	8.8e-08	1	1
ENSECAP00000022670	ResIII	PF04851.15	9.1e-08	1	1
ENSECAP00000008832	ResIII	PF04851.15	1.1e-07	1	1
ENSECAP00000023144	ResIII	PF04851.15	1.2e-07	1	1
ENSECAP00000044958	ResIII	PF04851.15	1.4e-07	1	1
ENSECAP00000042964	ResIII	PF04851.15	1.5e-07	1	1
ENSECAP00000043090	ResIII	PF04851.15	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000060348	-	5040	-	ENSECAP00000035739	1679 (aa)	-	-
ENSECAT00000047835	-	5133	-	ENSECAP00000043090	1710 (aa)	-	-
ENSECAT00000027099	-	5964	-	ENSECAP00000022670	1987 (aa)	-	F6Q5E6
ENSECAT00000052329	-	5208	-	ENSECAP00000044958	1735 (aa)	-	-
ENSECAT00000027096	-	5895	-	ENSECAP00000022667	1964 (aa)	-	F6Q627
ENSECAT00000039053	-	5784	-	ENSECAP00000044804	1927 (aa)	-	-
ENSECAT00000057947	-	5409	-	ENSECAP00000042964	1802 (aa)	-	-
ENSECAT00000011313	-	4968	-	ENSECAP00000008832	1655 (aa)	-	F7DG51
ENSECAT00000060308	-	5301	-	ENSECAP00000023144	1766 (aa)	-	-

Gene Model

Click here to download ENSECAG00000025043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000025043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000025043	CHD5	92	81.696	ENSECAG00000010051	CHD3	86	84.834
ENSECAG00000025043	CHD5	97	79.915	ENSECAG00000022005	CHD4	88	80.751

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000025043	CHD5	98	97.942	ENSG00000116254	CHD5	99	94.570	Homo_sapiens
ENSECAG00000025043	CHD5	98	97.610	ENSAMEG00000009880	CHD5	99	94.857	Ailuropoda_melanoleuca
ENSECAG00000025043	CHD5	95	85.772	ENSACIG00000012582	chd5	87	89.908	Amphilophus_citrinellus
ENSECAG00000025043	CHD5	93	87.137	ENSAOCG00000020356	chd5	94	77.567	Amphiprion_ocellaris
ENSECAG00000025043	CHD5	96	92.917	ENSAPLG00000015475	CHD5	90	92.917	Anas_platyrhynchos
ENSECAG00000025043	CHD5	98	90.678	ENSACAG00000002441	CHD5	98	80.987	Anolis_carolinensis
ENSECAG00000025043	CHD5	94	97.917	ENSANAG00000001078	CHD5	91	93.934	Aotus_nancymaae
ENSECAG00000025043	CHD5	96	81.577	ENSACLG00000003012	chd5	96	74.806	Astatotilapia_calliptera
ENSECAG00000025043	CHD5	93	84.553	ENSAMXG00000008921	chd5	95	86.047	Astyanax_mexicanus
ENSECAG00000025043	CHD5	95	98.750	ENSBTAG00000040477	CHD5	99	95.485	Bos_taurus
ENSECAG00000025043	CHD5	98	97.211	ENSCJAG00000000101	CHD5	99	94.416	Callithrix_jacchus
ENSECAG00000025043	CHD5	95	97.610	ENSCAFG00000019545	CHD5	99	95.702	Canis_familiaris
ENSECAG00000025043	CHD5	98	97.610	ENSCAFG00020008689	CHD5	99	95.010	Canis_lupus_dingo
ENSECAG00000025043	CHD5	99	98.354	ENSCHIG00000015027	CHD5	100	92.475	Capra_hircus
ENSECAG00000025043	CHD5	98	97.942	ENSTSYG00000033991	CHD5	99	92.025	Carlito_syrichta
ENSECAG00000025043	CHD5	98	95.618	ENSCAPG00000009294	CHD5	99	93.309	Cavia_aperea
ENSECAG00000025043	CHD5	98	95.618	ENSCPOG00000025080	CHD5	99	93.309	Cavia_porcellus
ENSECAG00000025043	CHD5	98	97.942	ENSCCAG00000024756	CHD5	99	94.467	Cebus_capucinus
ENSECAG00000025043	CHD5	98	98.008	ENSCATG00000043011	CHD5	99	93.750	Cercocebus_atys
ENSECAG00000025043	CHD5	98	97.917	ENSCLAG00000010589	CHD5	99	93.496	Chinchilla_lanigera
ENSECAG00000025043	CHD5	98	97.610	ENSCSAG00000000733	CHD5	99	94.723	Chlorocebus_sabaeus
ENSECAG00000025043	CHD5	95	92.095	ENSCPBG00000019363	CHD5	99	88.403	Chrysemys_picta_bellii
ENSECAG00000025043	CHD5	98	98.008	ENSCANG00000032302	CHD5	99	94.693	Colobus_angolensis_palliatus
ENSECAG00000025043	CHD5	62	93.631	ENSCGRG00001011042	Chd5	100	92.690	Cricetulus_griseus_chok1gshd
ENSECAG00000025043	CHD5	99	97.531	ENSCGRG00000011341	Chd5	99	93.016	Cricetulus_griseus_crigri
ENSECAG00000025043	CHD5	95	90.338	ENSDARG00000105083	chd5	86	92.093	Danio_rerio
ENSECAG00000025043	CHD5	94	76.498	ENSDARG00000025789	chd4b	85	79.091	Danio_rerio
ENSECAG00000025043	CHD5	98	96.813	ENSDNOG00000046342	CHD5	99	89.229	Dasypus_novemcinctus
ENSECAG00000025043	CHD5	99	97.119	ENSDORG00000005923	Chd5	99	93.399	Dipodomys_ordii
ENSECAG00000025043	CHD5	100	99.597	ENSEASG00005021464	CHD5	100	99.597	Equus_asinus_asinus
ENSECAG00000025043	CHD5	77	99.526	ENSEEUG00000002772	CHD5	77	99.531	Erinaceus_europaeus
ENSECAG00000025043	CHD5	92	91.626	ENSELUG00000010742	chd5	93	91.628	Esox_lucius
ENSECAG00000025043	CHD5	98	98.008	ENSFCAG00000006319	CHD5	99	95.287	Felis_catus
ENSECAG00000025043	CHD5	98	90.196	ENSFALG00000009740	CHD5	99	86.193	Ficedula_albicollis
ENSECAG00000025043	CHD5	98	95.219	ENSFDAG00000012881	CHD5	98	91.410	Fukomys_damarensis
ENSECAG00000025043	CHD5	96	90.909	ENSGALG00000000747	CHD5	99	84.987	Gallus_gallus
ENSECAG00000025043	CHD5	64	80.812	ENSGACG00000004389	chd5	99	78.268	Gasterosteus_aculeatus
ENSECAG00000025043	CHD5	98	93.200	ENSGAGG00000001590	CHD5	99	97.525	Gopherus_agassizii
ENSECAG00000025043	CHD5	98	97.610	ENSGGOG00000000708	CHD5	99	94.537	Gorilla_gorilla
ENSECAG00000025043	CHD5	96	79.185	ENSHBUG00000013453	chd5	86	89.189	Haplochromis_burtoni
ENSECAG00000025043	CHD5	98	96.016	ENSHGLG00000018184	CHD5	99	93.312	Heterocephalus_glaber_female
ENSECAG00000025043	CHD5	98	96.016	ENSHGLG00100013261	CHD5	99	85.585	Heterocephalus_glaber_male
ENSECAG00000025043	CHD5	95	86.809	ENSIPUG00000005446	chd5	88	87.619	Ictalurus_punctatus
ENSECAG00000025043	CHD5	98	97.581	ENSSTOG00000002778	CHD5	99	93.658	Ictidomys_tridecemlineatus
ENSECAG00000025043	CHD5	99	97.119	ENSJJAG00000019072	Chd5	99	92.799	Jaculus_jaculus
ENSECAG00000025043	CHD5	96	94.884	ENSLOCG00000004944	chd5	84	94.884	Lepisosteus_oculatus
ENSECAG00000025043	CHD5	99	98.765	ENSLAFG00000006348	CHD5	99	95.322	Loxodonta_africana
ENSECAG00000025043	CHD5	98	97.610	ENSMFAG00000033993	CHD5	99	94.766	Macaca_fascicularis
ENSECAG00000025043	CHD5	98	98.333	ENSMMUG00000016838	CHD5	99	94.447	Macaca_mulatta
ENSECAG00000025043	CHD5	98	97.610	ENSMNEG00000040044	CHD5	99	94.775	Macaca_nemestrina
ENSECAG00000025043	CHD5	98	93.001	ENSMLEG00000039166	CHD5	99	91.376	Mandrillus_leucophaeus
ENSECAG00000025043	CHD5	95	81.577	ENSMZEG00005000841	chd5	91	80.195	Maylandia_zebra
ENSECAG00000025043	CHD5	96	90.551	ENSMGAG00000001055	CHD5	99	85.270	Meleagris_gallopavo
ENSECAG00000025043	CHD5	98	97.211	ENSMICG00000017862	CHD5	99	95.217	Microcebus_murinus
ENSECAG00000025043	CHD5	98	97.984	ENSMOCG00000011049	Chd5	99	92.861	Microtus_ochrogaster
ENSECAG00000025043	CHD5	76	94.821	ENSMODG00000006294	CHD5	81	94.457	Monodelphis_domestica
ENSECAG00000025043	CHD5	96	86.307	ENSMALG00000002831	chd5	87	90.090	Monopterus_albus
ENSECAG00000025043	CHD5	98	97.581	MGP_CAROLIEiJ_G0026857	Chd5	99	92.748	Mus_caroli
ENSECAG00000025043	CHD5	99	96.429	ENSMUSG00000005045	Chd5	99	92.404	Mus_musculus
ENSECAG00000025043	CHD5	98	97.984	MGP_PahariEiJ_G0029205	Chd5	99	92.705	Mus_pahari
ENSECAG00000025043	CHD5	98	97.581	MGP_SPRETEiJ_G0027850	Chd5	99	92.757	Mus_spretus
ENSECAG00000025043	CHD5	98	93.120	ENSMPUG00000007122	CHD5	99	90.267	Mustela_putorius_furo
ENSECAG00000025043	CHD5	98	92.003	ENSNGAG00000019812	Chd5	97	91.939	Nannospalax_galili
ENSECAG00000025043	CHD5	98	93.026	ENSNLEG00000010320	CHD5	99	92.092	Nomascus_leucogenys
ENSECAG00000025043	CHD5	87	90.777	ENSOPRG00000004304	CHD5	86	88.194	Ochotona_princeps
ENSECAG00000025043	CHD5	98	96.414	ENSODEG00000010262	CHD5	99	93.224	Octodon_degus
ENSECAG00000025043	CHD5	92	87.855	ENSONIG00000000619	chd5	83	90.826	Oreochromis_niloticus
ENSECAG00000025043	CHD5	94	92.377	ENSOANG00000001819	CHD5	85	95.614	Ornithorhynchus_anatinus
ENSECAG00000025043	CHD5	98	96.813	ENSOGAG00000005703	CHD5	100	92.481	Otolemur_garnettii
ENSECAG00000025043	CHD5	98	98.750	ENSOARG00000013425	CHD5	97	94.433	Ovis_aries
ENSECAG00000025043	CHD5	98	97.942	ENSPPAG00000034048	CHD5	99	94.540	Pan_paniscus
ENSECAG00000025043	CHD5	98	98.008	ENSPPRG00000009453	CHD5	99	94.723	Panthera_pardus
ENSECAG00000025043	CHD5	98	87.569	ENSPTIG00000013926	CHD5	99	87.577	Panthera_tigris_altaica
ENSECAG00000025043	CHD5	98	97.942	ENSPTRG00000000075	CHD5	99	94.521	Pan_troglodytes
ENSECAG00000025043	CHD5	98	98.008	ENSPANG00000006765	CHD5	99	94.723	Papio_anubis
ENSECAG00000025043	CHD5	98	84.064	ENSPKIG00000004282	chd5	90	92.166	Paramormyrops_kingsleyae
ENSECAG00000025043	CHD5	97	86.802	ENSPSIG00000006414	CHD5	100	81.055	Pelodiscus_sinensis
ENSECAG00000025043	CHD5	74	94.835	ENSPEMG00000014799	Chd5	99	92.835	Peromyscus_maniculatus_bairdii
ENSECAG00000025043	CHD5	98	96.016	ENSPCIG00000028310	CHD5	99	88.648	Phascolarctos_cinereus
ENSECAG00000025043	CHD5	85	100.000	ENSPLAG00000005343	chd5	87	94.231	Poecilia_latipinna
ENSECAG00000025043	CHD5	96	96.562	ENSPPYG00000001952	CHD5	99	89.958	Pongo_abelii
ENSECAG00000025043	CHD5	98	97.942	ENSPCOG00000022930	CHD5	99	94.980	Propithecus_coquereli
ENSECAG00000025043	CHD5	96	85.477	ENSPNYG00000003183	chd5	89	89.450	Pundamilia_nyererei
ENSECAG00000025043	CHD5	98	97.211	ENSRNOG00000011268	Chd5	99	92.748	Rattus_norvegicus
ENSECAG00000025043	CHD5	98	98.008	ENSRBIG00000032140	CHD5	98	93.533	Rhinopithecus_bieti
ENSECAG00000025043	CHD5	98	98.008	ENSRROG00000041146	CHD5	98	94.433	Rhinopithecus_roxellana
ENSECAG00000025043	CHD5	98	96.016	ENSSBOG00000001955	CHD5	99	96.512	Saimiri_boliviensis_boliviensis
ENSECAG00000025043	CHD5	98	86.749	ENSSHAG00000018641	CHD5	100	84.341	Sarcophilus_harrisii
ENSECAG00000025043	CHD5	97	88.841	ENSSFOG00015006296	chd5	92	87.059	Scleropages_formosus
ENSECAG00000025043	CHD5	96	83.594	ENSSDUG00000017526	chd5	93	90.826	Seriola_dumerili
ENSECAG00000025043	CHD5	98	93.651	ENSSPUG00000010622	CHD5	89	94.650	Sphenodon_punctatus
ENSECAG00000025043	CHD5	98	98.790	ENSSSCG00000003366	CHD5	99	95.537	Sus_scrofa
ENSECAG00000025043	CHD5	96	91.810	ENSTGUG00000002634	-	92	91.845	Taeniopygia_guttata
ENSECAG00000025043	CHD5	60	79.061	ENSTNIG00000004346	chd5	99	79.582	Tetraodon_nigroviridis
ENSECAG00000025043	CHD5	99	97.942	ENSTTRG00000010468	CHD5	99	93.188	Tursiops_truncatus
ENSECAG00000025043	CHD5	98	98.008	ENSUAMG00000024509	CHD5	99	94.661	Ursus_americanus
ENSECAG00000025043	CHD5	97	97.260	ENSUMAG00000024173	CHD5	98	92.241	Ursus_maritimus
ENSECAG00000025043	CHD5	98	97.610	ENSVVUG00000026480	CHD5	96	98.374	Vulpes_vulpes
ENSECAG00000025043	CHD5	98	91.304	ENSXETG00000002904	chd5	89	96.847	Xenopus_tropicalis
ENSECAG00000025043	CHD5	65	83.871	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus