EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000025056 (Gene tree)
Gene ID: 100069324
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 181895 bases
Position: chr13:24011126-24193020
Accession: 24398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000023421	Ago_hook	PF10427.9	5e-19	1	1
ENSECAP00000024384	Ago_hook	PF10427.9	5e-19	1	1
ENSECAP00000042953	Ago_hook	PF10427.9	5.1e-19	1	1
ENSECAP00000022639	Ago_hook	PF10427.9	5.1e-19	1	1
ENSECAP00000025607	Ago_hook	PF10427.9	1.2e-18	1	1
ENSECAP00000029409	Ago_hook	PF10427.9	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000027062	-	5856	-	ENSECAP00000022639	1951 (aa)	XP_023471862	F6QKH3
ENSECAT00000054695	-	5823	-	ENSECAP00000025607	1940 (aa)	XP_023471863	UPI000C9EB19C
ENSECAT00000030456	-	5974	-	ENSECAP00000042953	1875 (aa)	-	-
ENSECAT00000062454	-	5463	-	ENSECAP00000024384	1820 (aa)	XP_023471867	UPI000C9E2364
ENSECAT00000048288	-	5583	-	ENSECAP00000029409	1860 (aa)	-	-
ENSECAT00000054821	-	6121	-	ENSECAP00000023421	1924 (aa)	XP_023471864	UPI0004BD7264

Gene Model

Click here to download ENSECAG00000025056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000025056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000025056	TNRC6A	95	52.083	ENSECAG00000009759	TNRC6B	99	54.404
ENSECAG00000025056	TNRC6A	98	43.005	ENSECAG00000012486	TNRC6C	96	48.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000025056	TNRC6A	100	96.944	ENSG00000090905	TNRC6A	100	96.587	Homo_sapiens
ENSECAG00000025056	TNRC6A	99	96.864	ENSAMEG00000009333	TNRC6A	100	96.864	Ailuropoda_melanoleuca
ENSECAG00000025056	TNRC6A	99	82.251	ENSAPLG00000009978	TNRC6A	100	81.937	Anas_platyrhynchos
ENSECAG00000025056	TNRC6A	100	68.966	ENSACAG00000011857	TNRC6A	97	65.413	Anolis_carolinensis
ENSECAG00000025056	TNRC6A	100	96.718	ENSANAG00000025252	TNRC6A	100	96.476	Aotus_nancymaae
ENSECAG00000025056	TNRC6A	92	61.635	ENSAMXG00000019919	tnrc6a	100	57.118	Astyanax_mexicanus
ENSECAG00000025056	TNRC6A	100	96.271	ENSBTAG00000017999	TNRC6A	99	96.314	Bos_taurus
ENSECAG00000025056	TNRC6A	100	98.182	ENSCJAG00000020677	TNRC6A	100	95.937	Callithrix_jacchus
ENSECAG00000025056	TNRC6A	100	96.739	ENSCAFG00000017531	TNRC6A	100	96.731	Canis_familiaris
ENSECAG00000025056	TNRC6A	99	94.323	ENSCAFG00020021160	TNRC6A	99	94.861	Canis_lupus_dingo
ENSECAG00000025056	TNRC6A	100	96.164	ENSCHIG00000019448	TNRC6A	99	96.164	Capra_hircus
ENSECAG00000025056	TNRC6A	100	96.661	ENSTSYG00000012711	TNRC6A	100	96.274	Carlito_syrichta
ENSECAG00000025056	TNRC6A	100	96.162	ENSCPOG00000036684	TNRC6A	99	96.162	Cavia_porcellus
ENSECAG00000025056	TNRC6A	100	96.774	ENSCCAG00000033664	TNRC6A	100	96.480	Cebus_capucinus
ENSECAG00000025056	TNRC6A	100	96.093	ENSCATG00000019284	TNRC6A	99	96.093	Cercocebus_atys
ENSECAG00000025056	TNRC6A	99	90.763	ENSCLAG00000010217	TNRC6A	100	88.821	Chinchilla_lanigera
ENSECAG00000025056	TNRC6A	100	97.001	ENSCSAG00000006561	TNRC6A	100	96.583	Chlorocebus_sabaeus
ENSECAG00000025056	TNRC6A	94	92.262	ENSCHOG00000009374	TNRC6A	95	91.088	Choloepus_hoffmanni
ENSECAG00000025056	TNRC6A	97	79.820	ENSCPBG00000001881	TNRC6A	99	81.823	Chrysemys_picta_bellii
ENSECAG00000025056	TNRC6A	100	97.057	ENSCANG00000041549	TNRC6A	100	96.682	Colobus_angolensis_palliatus
ENSECAG00000025056	TNRC6A	99	94.861	ENSCGRG00001015021	Tnrc6a	99	94.806	Cricetulus_griseus_chok1gshd
ENSECAG00000025056	TNRC6A	99	94.118	ENSCGRG00000013351	Tnrc6a	97	94.064	Cricetulus_griseus_crigri
ENSECAG00000025056	TNRC6A	97	56.424	ENSDARG00000079688	tnrc6a	99	56.846	Danio_rerio
ENSECAG00000025056	TNRC6A	99	94.025	ENSDNOG00000013989	TNRC6A	99	93.920	Dasypus_novemcinctus
ENSECAG00000025056	TNRC6A	99	87.123	ENSETEG00000014658	TNRC6A	99	87.223	Echinops_telfairi
ENSECAG00000025056	TNRC6A	100	99.897	ENSEASG00005017693	TNRC6A	100	99.897	Equus_asinus_asinus
ENSECAG00000025056	TNRC6A	99	89.034	ENSEEUG00000004530	TNRC6A	99	88.982	Erinaceus_europaeus
ENSECAG00000025056	TNRC6A	100	95.810	ENSFCAG00000025236	TNRC6A	100	95.396	Felis_catus
ENSECAG00000025056	TNRC6A	97	81.475	ENSFALG00000003757	TNRC6A	93	87.037	Ficedula_albicollis
ENSECAG00000025056	TNRC6A	97	80.416	ENSGALG00000006068	TNRC6A	99	82.488	Gallus_gallus
ENSECAG00000025056	TNRC6A	97	79.169	ENSGAGG00000023209	TNRC6A	99	81.379	Gopherus_agassizii
ENSECAG00000025056	TNRC6A	100	96.436	ENSGGOG00000005137	TNRC6A	99	96.454	Gorilla_gorilla
ENSECAG00000025056	TNRC6A	96	74.294	ENSHGLG00000007368	-	93	73.796	Heterocephalus_glaber_female
ENSECAG00000025056	TNRC6A	98	93.723	ENSHGLG00000012474	-	100	90.867	Heterocephalus_glaber_female
ENSECAG00000025056	TNRC6A	98	93.482	ENSHGLG00100012496	-	100	90.647	Heterocephalus_glaber_male
ENSECAG00000025056	TNRC6A	99	96.038	ENSSTOG00000023394	TNRC6A	99	94.758	Ictidomys_tridecemlineatus
ENSECAG00000025056	TNRC6A	99	69.845	ENSLACG00000006277	TNRC6A	100	70.415	Latimeria_chalumnae
ENSECAG00000025056	TNRC6A	100	82.561	ENSLOCG00000005517	tnrc6a	93	82.561	Lepisosteus_oculatus
ENSECAG00000025056	TNRC6A	99	95.526	ENSLAFG00000004209	TNRC6A	99	95.523	Loxodonta_africana
ENSECAG00000025056	TNRC6A	99	94.488	ENSMFAG00000003824	TNRC6A	99	94.384	Macaca_fascicularis
ENSECAG00000025056	TNRC6A	100	96.944	ENSMMUG00000020428	TNRC6A	100	96.478	Macaca_mulatta
ENSECAG00000025056	TNRC6A	100	96.887	ENSMNEG00000034854	TNRC6A	100	96.089	Macaca_nemestrina
ENSECAG00000025056	TNRC6A	99	94.243	ENSMLEG00000042737	TNRC6A	97	93.983	Mandrillus_leucophaeus
ENSECAG00000025056	TNRC6A	97	82.745	ENSMGAG00000006455	TNRC6A	93	87.037	Meleagris_gallopavo
ENSECAG00000025056	TNRC6A	99	94.717	ENSMAUG00000012750	Tnrc6a	100	92.213	Mesocricetus_auratus
ENSECAG00000025056	TNRC6A	100	97.510	ENSMICG00000030685	TNRC6A	100	96.994	Microcebus_murinus
ENSECAG00000025056	TNRC6A	99	94.555	ENSMOCG00000000152	Tnrc6a	100	92.008	Microtus_ochrogaster
ENSECAG00000025056	TNRC6A	99	82.163	ENSMODG00000016348	TNRC6A	99	82.214	Monodelphis_domestica
ENSECAG00000025056	TNRC6A	99	92.615	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	93.500	Mus_caroli
ENSECAG00000025056	TNRC6A	99	93.315	ENSMUSG00000052707	Tnrc6a	99	93.929	Mus_musculus
ENSECAG00000025056	TNRC6A	99	93.588	MGP_PahariEiJ_G0013635	Tnrc6a	100	94.357	Mus_pahari
ENSECAG00000025056	TNRC6A	100	93.391	MGP_SPRETEiJ_G0031539	Tnrc6a	100	93.786	Mus_spretus
ENSECAG00000025056	TNRC6A	99	84.727	ENSMPUG00000012324	TNRC6A	100	84.566	Mustela_putorius_furo
ENSECAG00000025056	TNRC6A	99	94.043	ENSMLUG00000002701	TNRC6A	100	93.569	Myotis_lucifugus
ENSECAG00000025056	TNRC6A	99	95.312	ENSNGAG00000020702	Tnrc6a	98	95.205	Nannospalax_galili
ENSECAG00000025056	TNRC6A	99	94.232	ENSNLEG00000011851	TNRC6A	98	93.908	Nomascus_leucogenys
ENSECAG00000025056	TNRC6A	77	88.938	ENSMEUG00000015959	-	77	88.496	Notamacropus_eugenii
ENSECAG00000025056	TNRC6A	96	98.134	ENSOPRG00000005819	TNRC6A	96	98.134	Ochotona_princeps
ENSECAG00000025056	TNRC6A	98	89.821	ENSODEG00000012802	TNRC6A	97	89.767	Octodon_degus
ENSECAG00000025056	TNRC6A	94	82.860	ENSOANG00000007672	TNRC6A	100	83.159	Ornithorhynchus_anatinus
ENSECAG00000025056	TNRC6A	99	92.733	ENSOCUG00000004325	TNRC6A	100	92.628	Oryctolagus_cuniculus
ENSECAG00000025056	TNRC6A	100	97.047	ENSOGAG00000006666	TNRC6A	100	97.062	Otolemur_garnettii
ENSECAG00000025056	TNRC6A	99	94.905	ENSOARG00000017950	TNRC6A	98	96.564	Ovis_aries
ENSECAG00000025056	TNRC6A	100	96.291	ENSPPAG00000028379	TNRC6A	100	96.287	Pan_paniscus
ENSECAG00000025056	TNRC6A	100	95.810	ENSPPRG00000005861	TNRC6A	100	95.396	Panthera_pardus
ENSECAG00000025056	TNRC6A	99	95.753	ENSPTIG00000006346	TNRC6A	99	94.034	Panthera_tigris_altaica
ENSECAG00000025056	TNRC6A	99	95.888	ENSPTRG00000007898	TNRC6A	99	95.940	Pan_troglodytes
ENSECAG00000025056	TNRC6A	100	94.454	ENSPANG00000018523	TNRC6A	100	94.151	Papio_anubis
ENSECAG00000025056	TNRC6A	93	74.877	ENSPKIG00000012859	tnrc6a	95	78.919	Paramormyrops_kingsleyae
ENSECAG00000025056	TNRC6A	83	75.098	ENSPSIG00000003965	TNRC6A	100	77.380	Pelodiscus_sinensis
ENSECAG00000025056	TNRC6A	99	94.232	ENSPEMG00000016318	Tnrc6a	98	93.854	Peromyscus_maniculatus_bairdii
ENSECAG00000025056	TNRC6A	99	83.727	ENSPCIG00000012106	TNRC6A	100	84.161	Phascolarctos_cinereus
ENSECAG00000025056	TNRC6A	100	95.872	ENSPPYG00000007202	TNRC6A	100	95.874	Pongo_abelii
ENSECAG00000025056	TNRC6A	95	98.148	ENSPCAG00000008260	TNRC6A	94	96.907	Procavia_capensis
ENSECAG00000025056	TNRC6A	100	94.963	ENSPCOG00000010134	TNRC6A	100	94.699	Propithecus_coquereli
ENSECAG00000025056	TNRC6A	88	73.650	ENSPVAG00000012066	TNRC6A	99	71.404	Pteropus_vampyrus
ENSECAG00000025056	TNRC6A	99	92.835	ENSRNOG00000024737	Tnrc6a	100	90.951	Rattus_norvegicus
ENSECAG00000025056	TNRC6A	100	96.532	ENSRBIG00000014222	TNRC6A	100	96.532	Rhinopithecus_bieti
ENSECAG00000025056	TNRC6A	100	96.829	ENSRROG00000032360	TNRC6A	100	96.829	Rhinopithecus_roxellana
ENSECAG00000025056	TNRC6A	99	95.906	ENSSBOG00000036197	TNRC6A	100	97.193	Saimiri_boliviensis_boliviensis
ENSECAG00000025056	TNRC6A	97	81.747	ENSSHAG00000008811	TNRC6A	99	83.941	Sarcophilus_harrisii
ENSECAG00000025056	TNRC6A	93	66.667	ENSSFOG00015008920	tnrc6a	99	64.662	Scleropages_formosus
ENSECAG00000025056	TNRC6A	73	84.601	ENSSARG00000002479	TNRC6A	89	83.514	Sorex_araneus
ENSECAG00000025056	TNRC6A	97	78.456	ENSSPUG00000010525	TNRC6A	100	78.829	Sphenodon_punctatus
ENSECAG00000025056	TNRC6A	100	96.559	ENSSSCG00000038870	TNRC6A	100	98.069	Sus_scrofa
ENSECAG00000025056	TNRC6A	99	80.301	ENSTGUG00000006142	TNRC6A	100	77.982	Taeniopygia_guttata
ENSECAG00000025056	TNRC6A	99	94.099	ENSTBEG00000014965	TNRC6A	100	94.099	Tupaia_belangeri
ENSECAG00000025056	TNRC6A	94	97.629	ENSTTRG00000002008	TNRC6A	93	97.629	Tursiops_truncatus
ENSECAG00000025056	TNRC6A	80	96.925	ENSUAMG00000006656	-	93	96.925	Ursus_americanus
ENSECAG00000025056	TNRC6A	99	96.737	ENSUMAG00000008274	TNRC6A	100	97.590	Ursus_maritimus
ENSECAG00000025056	TNRC6A	57	86.935	ENSVPAG00000010764	-	57	86.935	Vicugna_pacos
ENSECAG00000025056	TNRC6A	100	96.636	ENSVVUG00000005380	TNRC6A	100	96.636	Vulpes_vulpes
ENSECAG00000025056	TNRC6A	99	64.975	ENSXETG00000030437	TNRC6A	99	65.409	Xenopus_tropicalis