EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000026937 (Gene tree)
Gene ID: 100061589
Gene Symbol: SNRNP48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 16327 bases
Position: chr20:8157901-8174227
Accession: 23392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000023014	zf-U11-48K	PF05253.12	4.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000028958	-	1020	-	ENSECAP00000023014	339 (aa)	XP_023480197	F6ZV57

Gene Model

Click here to download ENSECAG00000026937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000026937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000026937	SNRNP48	100	93.215	ENSG00000168566	SNRNP48	100	93.215	Homo_sapiens
ENSECAG00000026937	SNRNP48	81	47.183	ENSAPOG00000021430	snrnp48	83	47.241	Acanthochromis_polyacanthus
ENSECAG00000026937	SNRNP48	99	91.931	ENSAMEG00000017349	SNRNP48	100	91.931	Ailuropoda_melanoleuca
ENSECAG00000026937	SNRNP48	88	45.545	ENSACIG00000002032	snrnp48	83	45.965	Amphilophus_citrinellus
ENSECAG00000026937	SNRNP48	81	47.887	ENSAOCG00000010562	snrnp48	96	42.816	Amphiprion_ocellaris
ENSECAG00000026937	SNRNP48	81	47.518	ENSAPEG00000003231	snrnp48	83	47.222	Amphiprion_percula
ENSECAG00000026937	SNRNP48	83	47.902	ENSATEG00000020210	snrnp48	87	45.574	Anabas_testudineus
ENSECAG00000026937	SNRNP48	83	63.356	ENSACAG00000002811	SNRNP48	90	63.356	Anolis_carolinensis
ENSECAG00000026937	SNRNP48	100	92.625	ENSANAG00000033538	SNRNP48	100	92.625	Aotus_nancymaae
ENSECAG00000026937	SNRNP48	94	45.231	ENSAMXG00000015309	snrnp48	85	47.569	Astyanax_mexicanus
ENSECAG00000026937	SNRNP48	100	88.235	ENSBTAG00000001123	SNRNP48	100	89.412	Bos_taurus
ENSECAG00000026937	SNRNP48	100	92.920	ENSCJAG00000021330	SNRNP48	100	92.920	Callithrix_jacchus
ENSECAG00000026937	SNRNP48	99	94.345	ENSCAFG00000009574	SNRNP48	83	94.345	Canis_familiaris
ENSECAG00000026937	SNRNP48	99	94.643	ENSCAFG00020013203	SNRNP48	99	94.643	Canis_lupus_dingo
ENSECAG00000026937	SNRNP48	100	89.706	ENSCHIG00000015216	SNRNP48	100	90.882	Capra_hircus
ENSECAG00000026937	SNRNP48	100	90.855	ENSTSYG00000000698	SNRNP48	100	90.855	Carlito_syrichta
ENSECAG00000026937	SNRNP48	91	85.714	ENSCAPG00000006768	SNRNP48	100	85.714	Cavia_aperea
ENSECAG00000026937	SNRNP48	100	89.381	ENSCPOG00000007910	SNRNP48	100	89.381	Cavia_porcellus
ENSECAG00000026937	SNRNP48	100	91.445	ENSCCAG00000035652	SNRNP48	100	91.445	Cebus_capucinus
ENSECAG00000026937	SNRNP48	100	92.625	ENSCATG00000033947	SNRNP48	100	92.625	Cercocebus_atys
ENSECAG00000026937	SNRNP48	100	89.676	ENSCLAG00000003765	SNRNP48	100	89.676	Chinchilla_lanigera
ENSECAG00000026937	SNRNP48	100	93.215	ENSCSAG00000007409	SNRNP48	100	93.215	Chlorocebus_sabaeus
ENSECAG00000026937	SNRNP48	85	63.907	ENSCPBG00000019146	SNRNP48	92	63.907	Chrysemys_picta_bellii
ENSECAG00000026937	SNRNP48	100	93.215	ENSCANG00000030017	SNRNP48	100	93.215	Colobus_angolensis_palliatus
ENSECAG00000026937	SNRNP48	99	69.552	ENSCGRG00001008805	-	95	68.955	Cricetulus_griseus_chok1gshd
ENSECAG00000026937	SNRNP48	100	88.791	ENSCGRG00001001076	-	100	88.496	Cricetulus_griseus_chok1gshd
ENSECAG00000026937	SNRNP48	100	88.791	ENSCGRG00000007781	Snrnp48	100	88.496	Cricetulus_griseus_crigri
ENSECAG00000026937	SNRNP48	77	49.049	ENSCSEG00000000722	snrnp48	72	49.049	Cynoglossus_semilaevis
ENSECAG00000026937	SNRNP48	88	44.984	ENSCVAG00000019829	snrnp48	73	45.862	Cyprinodon_variegatus
ENSECAG00000026937	SNRNP48	81	44.366	ENSDARG00000039989	snrnp48	83	44.138	Danio_rerio
ENSECAG00000026937	SNRNP48	99	92.537	ENSDNOG00000014978	SNRNP48	99	92.537	Dasypus_novemcinctus
ENSECAG00000026937	SNRNP48	99	88.791	ENSDORG00000015140	Snrnp48	100	88.529	Dipodomys_ordii
ENSECAG00000026937	SNRNP48	99	99.408	ENSEASG00005012021	SNRNP48	99	99.408	Equus_asinus_asinus
ENSECAG00000026937	SNRNP48	100	71.176	ENSEEUG00000015437	SNRNP48	99	70.882	Erinaceus_europaeus
ENSECAG00000026937	SNRNP48	87	47.525	ENSELUG00000009766	snrnp48	77	48.399	Esox_lucius
ENSECAG00000026937	SNRNP48	100	95.280	ENSFCAG00000018853	SNRNP48	100	95.280	Felis_catus
ENSECAG00000026937	SNRNP48	83	64.726	ENSFALG00000007797	SNRNP48	93	64.726	Ficedula_albicollis
ENSECAG00000026937	SNRNP48	99	89.349	ENSFDAG00000009231	SNRNP48	100	89.086	Fukomys_damarensis
ENSECAG00000026937	SNRNP48	59	54.950	ENSFHEG00000014647	snrnp48	97	45.118	Fundulus_heteroclitus
ENSECAG00000026937	SNRNP48	73	47.581	ENSGMOG00000018599	-	87	46.154	Gadus_morhua
ENSECAG00000026937	SNRNP48	82	62.718	ENSGALG00000013005	SNRNP48	85	65.737	Gallus_gallus
ENSECAG00000026937	SNRNP48	74	50.000	ENSGAFG00000021639	snrnp48	80	47.163	Gambusia_affinis
ENSECAG00000026937	SNRNP48	71	50.413	ENSGACG00000017756	-	84	47.735	Gasterosteus_aculeatus
ENSECAG00000026937	SNRNP48	84	63.667	ENSGAGG00000000865	SNRNP48	97	63.667	Gopherus_agassizii
ENSECAG00000026937	SNRNP48	100	93.215	ENSGGOG00000013220	SNRNP48	100	93.215	Gorilla_gorilla
ENSECAG00000026937	SNRNP48	97	42.773	ENSHBUG00000017066	snrnp48	95	40.286	Haplochromis_burtoni
ENSECAG00000026937	SNRNP48	99	90.828	ENSHGLG00000015241	SNRNP48	100	90.560	Heterocephalus_glaber_female
ENSECAG00000026937	SNRNP48	99	90.828	ENSHGLG00100010027	SNRNP48	100	90.560	Heterocephalus_glaber_male
ENSECAG00000026937	SNRNP48	72	47.561	ENSHCOG00000014066	snrnp48	81	45.804	Hippocampus_comes
ENSECAG00000026937	SNRNP48	100	93.805	ENSSTOG00000014635	SNRNP48	100	94.000	Ictidomys_tridecemlineatus
ENSECAG00000026937	SNRNP48	100	85.546	ENSJJAG00000011495	Snrnp48	100	85.546	Jaculus_jaculus
ENSECAG00000026937	SNRNP48	87	46.128	ENSKMAG00000016514	snrnp48	80	46.263	Kryptolebias_marmoratus
ENSECAG00000026937	SNRNP48	76	48.276	ENSLBEG00000026249	snrnp48	95	42.899	Labrus_bergylta
ENSECAG00000026937	SNRNP48	96	53.593	ENSLACG00000003958	SNRNP48	98	52.478	Latimeria_chalumnae
ENSECAG00000026937	SNRNP48	86	48.837	ENSLOCG00000004187	snrnp48	99	47.278	Lepisosteus_oculatus
ENSECAG00000026937	SNRNP48	100	89.381	ENSLAFG00000011152	SNRNP48	100	89.381	Loxodonta_africana
ENSECAG00000026937	SNRNP48	100	93.510	ENSMFAG00000045216	SNRNP48	100	93.510	Macaca_fascicularis
ENSECAG00000026937	SNRNP48	100	93.510	ENSMMUG00000014785	SNRNP48	100	93.510	Macaca_mulatta
ENSECAG00000026937	SNRNP48	100	93.215	ENSMNEG00000042269	SNRNP48	100	93.215	Macaca_nemestrina
ENSECAG00000026937	SNRNP48	100	93.510	ENSMLEG00000034004	SNRNP48	100	93.510	Mandrillus_leucophaeus
ENSECAG00000026937	SNRNP48	76	47.893	ENSMAMG00000018673	snrnp48	71	47.687	Mastacembelus_armatus
ENSECAG00000026937	SNRNP48	83	63.946	ENSMGAG00000006037	SNRNP48	99	63.699	Meleagris_gallopavo
ENSECAG00000026937	SNRNP48	100	89.381	ENSMAUG00000011944	Snrnp48	100	89.086	Mesocricetus_auratus
ENSECAG00000026937	SNRNP48	100	91.740	ENSMICG00000012497	SNRNP48	100	91.740	Microcebus_murinus
ENSECAG00000026937	SNRNP48	100	88.496	ENSMOCG00000015555	Snrnp48	100	88.201	Microtus_ochrogaster
ENSECAG00000026937	SNRNP48	54	52.432	ENSMMOG00000003072	-	58	52.432	Mola_mola
ENSECAG00000026937	SNRNP48	99	70.725	ENSMODG00000009996	SNRNP48	93	70.725	Monodelphis_domestica
ENSECAG00000026937	SNRNP48	74	50.787	ENSMALG00000005725	snrnp48	80	48.399	Monopterus_albus
ENSECAG00000026937	SNRNP48	100	88.201	MGP_CAROLIEiJ_G0018441	Snrnp48	100	88.201	Mus_caroli
ENSECAG00000026937	SNRNP48	100	87.906	ENSMUSG00000021431	Snrnp48	100	87.906	Mus_musculus
ENSECAG00000026937	SNRNP48	100	87.316	MGP_PahariEiJ_G0019509	Snrnp48	100	87.316	Mus_pahari
ENSECAG00000026937	SNRNP48	100	87.316	MGP_SPRETEiJ_G0019321	Snrnp48	100	87.316	Mus_spretus
ENSECAG00000026937	SNRNP48	99	87.870	ENSNGAG00000004849	Snrnp48	99	87.870	Nannospalax_galili
ENSECAG00000026937	SNRNP48	74	46.484	ENSNBRG00000012127	snrnp48	82	44.637	Neolamprologus_brichardi
ENSECAG00000026937	SNRNP48	100	93.510	ENSNLEG00000011667	SNRNP48	100	93.510	Nomascus_leucogenys
ENSECAG00000026937	SNRNP48	95	78.328	ENSOPRG00000015471	SNRNP48	100	78.019	Ochotona_princeps
ENSECAG00000026937	SNRNP48	95	43.558	ENSONIG00000001520	snrnp48	82	44.983	Oreochromis_niloticus
ENSECAG00000026937	SNRNP48	57	64.904	ENSOANG00000019888	-	100	65.865	Ornithorhynchus_anatinus
ENSECAG00000026937	SNRNP48	84	89.510	ENSOCUG00000005168	SNRNP48	100	88.816	Oryctolagus_cuniculus
ENSECAG00000026937	SNRNP48	89	46.602	ENSORLG00000015654	snrnp48	82	47.423	Oryzias_latipes
ENSECAG00000026937	SNRNP48	89	45.307	ENSORLG00020015976	snrnp48	70	46.392	Oryzias_latipes_hni
ENSECAG00000026937	SNRNP48	89	46.278	ENSORLG00015022379	snrnp48	71	47.423	Oryzias_latipes_hsok
ENSECAG00000026937	SNRNP48	83	46.875	ENSOMEG00000022007	snrnp48	82	46.875	Oryzias_melastigma
ENSECAG00000026937	SNRNP48	92	91.318	ENSOGAG00000005275	SNRNP48	96	91.483	Otolemur_garnettii
ENSECAG00000026937	SNRNP48	85	89.547	ENSOARG00000017319	SNRNP48	100	89.547	Ovis_aries
ENSECAG00000026937	SNRNP48	100	93.510	ENSPPAG00000032873	SNRNP48	100	93.510	Pan_paniscus
ENSECAG00000026937	SNRNP48	100	95.575	ENSPPRG00000004283	SNRNP48	100	95.575	Panthera_pardus
ENSECAG00000026937	SNRNP48	85	96.167	ENSPTIG00000013502	SNRNP48	100	96.167	Panthera_tigris_altaica
ENSECAG00000026937	SNRNP48	100	93.510	ENSPTRG00000017703	SNRNP48	100	93.510	Pan_troglodytes
ENSECAG00000026937	SNRNP48	100	93.510	ENSPANG00000000771	SNRNP48	100	93.510	Papio_anubis
ENSECAG00000026937	SNRNP48	94	45.994	ENSPKIG00000013703	snrnp48	59	49.650	Paramormyrops_kingsleyae
ENSECAG00000026937	SNRNP48	84	62.458	ENSPSIG00000002213	SNRNP48	94	62.458	Pelodiscus_sinensis
ENSECAG00000026937	SNRNP48	76	47.710	ENSPMGG00000008120	snrnp48	91	47.710	Periophthalmus_magnuspinnatus
ENSECAG00000026937	SNRNP48	100	89.086	ENSPEMG00000008872	Snrnp48	100	88.791	Peromyscus_maniculatus_bairdii
ENSECAG00000026937	SNRNP48	73	51.793	ENSPFOG00000003578	snrnp48	80	47.872	Poecilia_formosa
ENSECAG00000026937	SNRNP48	67	50.655	ENSPLAG00000002290	snrnp48	77	50.655	Poecilia_latipinna
ENSECAG00000026937	SNRNP48	73	50.996	ENSPMEG00000018033	snrnp48	80	47.163	Poecilia_mexicana
ENSECAG00000026937	SNRNP48	72	51.220	ENSPREG00000018541	snrnp48	80	48.582	Poecilia_reticulata
ENSECAG00000026937	SNRNP48	100	92.035	ENSPPYG00000016209	SNRNP48	100	92.035	Pongo_abelii
ENSECAG00000026937	SNRNP48	79	72.659	ENSPCAG00000011991	SNRNP48	99	72.659	Procavia_capensis
ENSECAG00000026937	SNRNP48	100	92.330	ENSPVAG00000002854	SNRNP48	100	92.330	Pteropus_vampyrus
ENSECAG00000026937	SNRNP48	74	47.656	ENSPNYG00000015399	snrnp48	90	45.675	Pundamilia_nyererei
ENSECAG00000026937	SNRNP48	100	88.791	ENSRNOG00000013756	Snrnp48	100	88.791	Rattus_norvegicus
ENSECAG00000026937	SNRNP48	91	92.903	ENSRBIG00000043856	SNRNP48	97	93.421	Rhinopithecus_bieti
ENSECAG00000026937	SNRNP48	100	93.215	ENSRROG00000043229	SNRNP48	100	93.215	Rhinopithecus_roxellana
ENSECAG00000026937	SNRNP48	100	92.625	ENSSBOG00000019486	SNRNP48	100	92.625	Saimiri_boliviensis_boliviensis
ENSECAG00000026937	SNRNP48	98	71.221	ENSSHAG00000014483	SNRNP48	99	71.221	Sarcophilus_harrisii
ENSECAG00000026937	SNRNP48	73	50.996	ENSSFOG00015006610	snrnp48	69	48.639	Scleropages_formosus
ENSECAG00000026937	SNRNP48	88	45.364	ENSSDUG00000014953	snrnp48	83	46.875	Seriola_dumerili
ENSECAG00000026937	SNRNP48	88	45.928	ENSSLDG00000005989	snrnp48	83	46.875	Seriola_lalandi_dorsalis
ENSECAG00000026937	SNRNP48	84	64.430	ENSSPUG00000006257	SNRNP48	85	64.430	Sphenodon_punctatus
ENSECAG00000026937	SNRNP48	78	48.175	ENSSPAG00000006454	snrnp48	80	47.857	Stegastes_partitus
ENSECAG00000026937	SNRNP48	83	63.230	ENSTGUG00000007575	SNRNP48	93	63.230	Taeniopygia_guttata
ENSECAG00000026937	SNRNP48	73	50.199	ENSTRUG00000007031	snrnp48	82	48.936	Takifugu_rubripes
ENSECAG00000026937	SNRNP48	91	41.853	ENSTNIG00000012977	-	76	45.525	Tetraodon_nigroviridis
ENSECAG00000026937	SNRNP48	100	74.336	ENSTBEG00000015620	SNRNP48	100	74.336	Tupaia_belangeri
ENSECAG00000026937	SNRNP48	100	92.625	ENSTTRG00000016715	SNRNP48	100	92.625	Tursiops_truncatus
ENSECAG00000026937	SNRNP48	100	94.985	ENSUAMG00000003690	SNRNP48	100	94.985	Ursus_americanus
ENSECAG00000026937	SNRNP48	85	90.244	ENSVPAG00000003557	SNRNP48	100	90.244	Vicugna_pacos
ENSECAG00000026937	SNRNP48	99	94.048	ENSVVUG00000004996	SNRNP48	99	94.048	Vulpes_vulpes
ENSECAG00000026937	SNRNP48	86	51.342	ENSXETG00000020447	snrnp48	97	48.817	Xenopus_tropicalis
ENSECAG00000026937	SNRNP48	67	50.000	ENSXCOG00000004478	snrnp48	69	50.000	Xiphophorus_couchianus
ENSECAG00000026937	SNRNP48	82	49.104	ENSXMAG00000013595	snrnp48	81	44.479	Xiphophorus_maculatus