EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000029496 (Gene tree)
Gene ID: 100072624
Gene Symbol: RTL3
Alias: FLJ38865|Mar3|Mart3|SIRH9|ZCCHC5|ZHC5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 1479 bases
Position: chrX:61560884-61562362
Accession: 100072624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000040384	zf-CCHC	PF00098.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000056521	RTL3-201	1479	-	ENSECAP00000040384	492 (aa)	XP_003365869	UPI000214B933

Gene Model

Click here to download ENSECAG00000029496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000029496's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000029496	RTL3	99	65.269	ENSG00000179300	RTL3	99	65.669	Homo_sapiens
ENSECAG00000029496	RTL3	100	64.634	ENSTSYG00000008776	RTL3	100	64.634	Carlito_syrichta
ENSECAG00000029496	RTL3	100	55.476	ENSCGRG00001015952	Rtl3	100	56.194	Cricetulus_griseus_chok1gshd
ENSECAG00000029496	RTL3	100	64.118	ENSDORG00000029995	Rtl3	100	64.118	Dipodomys_ordii
ENSECAG00000029496	RTL3	100	61.940	ENSSTOG00000027152	RTL3	100	61.940	Ictidomys_tridecemlineatus
ENSECAG00000029496	RTL3	100	58.789	ENSJJAG00000014790	-	100	58.789	Jaculus_jaculus
ENSECAG00000029496	RTL3	100	55.091	ENSMAUG00000011823	Rtl3	100	55.154	Mesocricetus_auratus
ENSECAG00000029496	RTL3	100	69.600	ENSMICG00000004901	RTL3	100	70.400	Microcebus_murinus
ENSECAG00000029496	RTL3	100	51.332	ENSMOCG00000017247	Rtl3	100	52.962	Microtus_ochrogaster
ENSECAG00000029496	RTL3	100	52.931	MGP_CAROLIEiJ_G0033333	Rtl3	100	53.108	Mus_caroli
ENSECAG00000029496	RTL3	100	52.827	ENSMUSG00000047686	Rtl3	100	53.004	Mus_musculus
ENSECAG00000029496	RTL3	100	51.590	MGP_PahariEiJ_G0031869	Rtl3	100	52.120	Mus_pahari
ENSECAG00000029496	RTL3	100	52.650	MGP_SPRETEiJ_G0034497	Rtl3	100	52.827	Mus_spretus
ENSECAG00000029496	RTL3	100	55.536	ENSNGAG00000002851	Rtl3	100	51.670	Nannospalax_galili
ENSECAG00000029496	RTL3	100	62.898	ENSOCUG00000025689	RTL3	100	60.601	Oryctolagus_cuniculus
ENSECAG00000029496	RTL3	100	72.200	ENSPCOG00000016711	RTL3	100	72.200	Propithecus_coquereli
ENSECAG00000029496	RTL3	100	51.318	ENSRNOG00000002429	Rtl3	100	51.494	Rattus_norvegicus
ENSECAG00000029496	RTL3	100	66.061	ENSTBEG00000002464	RTL3	100	66.061	Tupaia_belangeri