EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000035665 (Gene tree)
Gene ID: 100059831
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase DDX53
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 1875 bases
Position: chrX:18431172-18433046
Accession: 100059831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000038241	KH_1	PF00013.29	1.3e-12	1	1
ENSECAP00000038241	DEAD	PF00270.29	3.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000003712	-	1875	-	ENSECAP00000038241	624 (aa)	XP_003365797	UPI000214B78C

Gene Model

Click here to download ENSECAG00000035665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000035665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000035665	-	56	33.427	ENSECAG00000000539	DDX6	72	33.427
ENSECAG00000035665	-	63	35.732	ENSECAG00000020963	DDX27	52	35.732
ENSECAG00000035665	-	71	42.984	ENSECAG00000011132	DDX5	71	42.984
ENSECAG00000035665	-	64	41.284	ENSECAG00000016681	DDX23	52	41.284
ENSECAG00000035665	-	99	70.206	ENSECAG00000017971	DDX43	91	73.639
ENSECAG00000035665	-	58	30.270	ENSECAG00000007750	DDX39B	85	30.270
ENSECAG00000035665	-	100	99.519	ENSECAG00000037015	DDX53	100	99.519
ENSECAG00000035665	-	61	38.520	ENSECAG00000009688	DDX41	61	38.520
ENSECAG00000035665	-	59	39.896	ENSECAG00000009901	DDX3X	62	39.896
ENSECAG00000035665	-	58	33.425	ENSECAG00000021223	EIF4A2	89	33.152
ENSECAG00000035665	-	53	37.574	ENSECAG00000015740	DDX18	51	37.574
ENSECAG00000035665	-	54	37.353	ENSECAG00000023622	DDX47	73	37.353
ENSECAG00000035665	-	59	30.027	ENSECAG00000040285	DDX39A	85	30.027
ENSECAG00000035665	-	62	30.023	ENSECAG00000005146	DDX31	60	30.023
ENSECAG00000035665	-	55	34.006	ENSECAG00000021478	EIF4A1	83	34.006
ENSECAG00000035665	-	62	35.115	ENSECAG00000006958	DDX59	57	43.284
ENSECAG00000035665	-	57	31.200	ENSECAG00000017635	-	75	31.200
ENSECAG00000035665	-	61	33.760	ENSECAG00000012286	DDX52	64	33.760
ENSECAG00000035665	-	59	41.379	ENSECAG00000023616	DDX4	59	41.379
ENSECAG00000035665	-	56	34.659	ENSECAG00000015925	EIF4A3	84	34.659
ENSECAG00000035665	-	59	31.188	ENSECAG00000006451	DDX28	74	31.773
ENSECAG00000035665	-	71	44.667	ENSECAG00000025110	DDX17	88	44.444
ENSECAG00000035665	-	55	35.211	ENSECAG00000012194	DDX49	71	35.511
ENSECAG00000035665	-	61	32.346	ENSECAG00000011237	DDX55	62	32.346

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000035665	-	95	76.988	ENSAMEG00000019953	-	97	76.988	Ailuropoda_melanoleuca
ENSECAG00000035665	-	95	74.329	ENSBTAG00000046635	-	93	75.433	Bos_taurus
ENSECAG00000035665	-	61	76.903	ENSCAFG00020005312	-	82	76.702	Canis_lupus_dingo
ENSECAG00000035665	-	97	74.673	ENSCHIG00000020582	-	99	73.052	Capra_hircus
ENSECAG00000035665	-	96	69.256	ENSCPOG00000013960	-	89	70.289	Cavia_porcellus
ENSECAG00000035665	-	94	69.091	ENSCLAG00000017424	-	90	69.091	Chinchilla_lanigera
ENSECAG00000035665	-	100	99.038	ENSEASG00005001728	-	97	99.038	Equus_asinus_asinus
ENSECAG00000035665	-	80	68.813	ENSFDAG00000020660	-	97	68.813	Fukomys_damarensis
ENSECAG00000035665	-	69	67.517	ENSFDAG00000018215	-	86	70.603	Fukomys_damarensis
ENSECAG00000035665	-	96	74.080	ENSSTOG00000027719	-	78	74.787	Ictidomys_tridecemlineatus
ENSECAG00000035665	-	100	71.178	ENSLAFG00000011531	-	99	70.541	Loxodonta_africana
ENSECAG00000035665	-	95	77.909	ENSMPUG00000019441	-	97	77.909	Mustela_putorius_furo
ENSECAG00000035665	-	100	68.603	ENSMLUG00000022321	-	99	68.917	Myotis_lucifugus
ENSECAG00000035665	-	95	70.588	ENSMLUG00000022233	-	98	70.588	Myotis_lucifugus
ENSECAG00000035665	-	100	69.545	ENSOCUG00000004437	-	100	69.545	Oryctolagus_cuniculus
ENSECAG00000035665	-	94	73.083	ENSOGAG00000026282	-	91	74.171	Otolemur_garnettii
ENSECAG00000035665	-	97	74.632	ENSOARG00000016525	-	100	73.008	Ovis_aries
ENSECAG00000035665	-	99	74.299	ENSPPRG00000011327	-	89	78.966	Panthera_pardus
ENSECAG00000035665	-	99	74.415	ENSPTIG00000001243	-	89	78.966	Panthera_tigris_altaica
ENSECAG00000035665	-	100	75.318	ENSPVAG00000001484	-	99	75.478	Pteropus_vampyrus
ENSECAG00000035665	-	100	77.143	ENSSSCG00000012169	-	100	77.143	Sus_scrofa
ENSECAG00000035665	-	59	51.902	ENSTBEG00000001513	-	86	53.153	Tupaia_belangeri
ENSECAG00000035665	-	100	69.206	ENSTBEG00000014650	-	93	72.279	Tupaia_belangeri
ENSECAG00000035665	-	100	67.778	ENSTTRG00000016514	-	99	67.619	Tursiops_truncatus
ENSECAG00000035665	-	95	78.824	ENSUAMG00000000177	-	93	78.921	Ursus_americanus
ENSECAG00000035665	-	59	85.135	ENSUMAG00000011448	-	84	85.135	Ursus_maritimus
ENSECAG00000035665	-	99	75.120	ENSVPAG00000007860	-	98	74.801	Vicugna_pacos
ENSECAG00000035665	-	94	76.361	ENSVVUG00000012789	-	95	76.361	Vulpes_vulpes