EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000038706 (Gene tree)
Gene ID: 100054282
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 21115 bases
Position: chr2:18497069-18518183
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000021831	RRM_1	PF00076.22	4.4e-13	1	1
ENSECAP00000029519	RRM_1	PF00076.22	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000036557	-	753	-	ENSECAP00000029519	250 (aa)	-	-
ENSECAT00000026191	-	879	-	ENSECAP00000021831	292 (aa)	-	F6XKX6

Gene Model

Click here to download ENSECAG00000038706's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000038706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000038706	-	100	96.013	ENSECAG00000031692	-	100	96.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000038706	-	100	98.400	ENSG00000084072	PPIE	100	98.400	Homo_sapiens
ENSECAG00000038706	-	100	82.781	ENSAPOG00000001160	ppie	100	83.113	Acanthochromis_polyacanthus
ENSECAG00000038706	-	100	82.943	ENSACIG00000022599	ppie	100	82.400	Amphilophus_citrinellus
ENSECAG00000038706	-	100	82.781	ENSAOCG00000021474	ppie	100	83.113	Amphiprion_ocellaris
ENSECAG00000038706	-	100	82.781	ENSAPEG00000019253	ppie	100	83.113	Amphiprion_percula
ENSECAG00000038706	-	100	82.724	ENSATEG00000007395	ppie	100	82.724	Anabas_testudineus
ENSECAG00000038706	-	100	87.043	ENSACAG00000002688	PPIE	100	87.043	Anolis_carolinensis
ENSECAG00000038706	-	100	97.600	ENSANAG00000033595	PPIE	100	97.600	Aotus_nancymaae
ENSECAG00000038706	-	100	82.781	ENSACLG00000019518	ppie	100	83.113	Astatotilapia_calliptera
ENSECAG00000038706	-	100	83.389	ENSAMXG00000018767	ppie	100	83.389	Astyanax_mexicanus
ENSECAG00000038706	-	100	97.603	ENSBTAG00000047314	PPIE	100	97.603	Bos_taurus
ENSECAG00000038706	-	100	98.000	ENSCJAG00000002589	PPIE	100	98.000	Callithrix_jacchus
ENSECAG00000038706	-	100	96.346	ENSCAFG00000003031	PPIE	100	96.346	Canis_familiaris
ENSECAG00000038706	-	100	96.346	ENSCAFG00020004132	PPIE	100	96.346	Canis_lupus_dingo
ENSECAG00000038706	-	98	58.503	ENSCHIG00000023905	-	100	58.503	Capra_hircus
ENSECAG00000038706	-	100	97.945	ENSCHIG00000012509	-	100	97.945	Capra_hircus
ENSECAG00000038706	-	100	98.288	ENSTSYG00000000401	PPIE	100	98.288	Carlito_syrichta
ENSECAG00000038706	-	100	97.260	ENSCPOG00000007365	PPIE	100	97.260	Cavia_porcellus
ENSECAG00000038706	-	100	98.400	ENSCCAG00000024434	PPIE	100	98.400	Cebus_capucinus
ENSECAG00000038706	-	100	98.800	ENSCATG00000034495	PPIE	100	98.800	Cercocebus_atys
ENSECAG00000038706	-	100	91.096	ENSCLAG00000010288	PPIE	100	91.096	Chinchilla_lanigera
ENSECAG00000038706	-	100	94.737	ENSCSAG00000001131	PPIE	100	94.737	Chlorocebus_sabaeus
ENSECAG00000038706	-	76	64.502	ENSCHOG00000009018	-	100	64.502	Choloepus_hoffmanni
ENSECAG00000038706	-	100	91.781	ENSCPBG00000001090	PPIE	100	91.781	Chrysemys_picta_bellii
ENSECAG00000038706	-	100	98.000	ENSCANG00000029996	PPIE	100	98.000	Colobus_angolensis_palliatus
ENSECAG00000038706	-	100	94.352	ENSCGRG00001018491	Ppie	100	94.352	Cricetulus_griseus_chok1gshd
ENSECAG00000038706	-	100	97.260	ENSCGRG00000005685	Ppie	100	97.260	Cricetulus_griseus_crigri
ENSECAG00000038706	-	98	83.333	ENSCSEG00000000047	ppie	99	83.333	Cynoglossus_semilaevis
ENSECAG00000038706	-	100	83.056	ENSCVAG00000019238	ppie	100	83.056	Cyprinodon_variegatus
ENSECAG00000038706	-	100	83.444	ENSDARG00000103234	ppie	91	83.775	Danio_rerio
ENSECAG00000038706	-	99	84.142	ENSDNOG00000002404	-	99	84.142	Dasypus_novemcinctus
ENSECAG00000038706	-	99	94.000	ENSDNOG00000034942	-	99	94.000	Dasypus_novemcinctus
ENSECAG00000038706	-	100	95.681	ENSDORG00000005175	Ppie	100	95.681	Dipodomys_ordii
ENSECAG00000038706	-	100	100.000	ENSEASG00005014118	-	100	100.000	Equus_asinus_asinus
ENSECAG00000038706	-	100	81.911	ENSELUG00000003162	ppie	100	81.911	Esox_lucius
ENSECAG00000038706	-	100	99.200	ENSFCAG00000006027	-	100	99.200	Felis_catus
ENSECAG00000038706	-	99	86.288	ENSFALG00000000545	PPIE	93	86.288	Ficedula_albicollis
ENSECAG00000038706	-	97	93.151	ENSFDAG00000017337	PPIE	97	93.151	Fukomys_damarensis
ENSECAG00000038706	-	100	83.721	ENSFHEG00000007560	ppie	100	83.721	Fundulus_heteroclitus
ENSECAG00000038706	-	100	84.300	ENSGMOG00000019015	ppie	100	84.300	Gadus_morhua
ENSECAG00000038706	-	97	88.699	ENSGALG00000013383	PPIE	91	88.699	Gallus_gallus
ENSECAG00000038706	-	100	83.056	ENSGAFG00000018146	ppie	100	83.056	Gambusia_affinis
ENSECAG00000038706	-	100	80.464	ENSGACG00000007165	ppie	100	80.795	Gasterosteus_aculeatus
ENSECAG00000038706	-	76	89.655	ENSGAGG00000001882	PPIE	95	89.655	Gopherus_agassizii
ENSECAG00000038706	-	100	98.400	ENSGGOG00000015783	PPIE	100	98.400	Gorilla_gorilla
ENSECAG00000038706	-	100	82.450	ENSHBUG00000020159	ppie	100	82.781	Haplochromis_burtoni
ENSECAG00000038706	-	100	93.688	ENSHGLG00000012598	PPIE	100	93.688	Heterocephalus_glaber_female
ENSECAG00000038706	-	98	92.857	ENSHGLG00100001779	PPIE	98	93.471	Heterocephalus_glaber_male
ENSECAG00000038706	-	100	82.060	ENSHCOG00000012644	ppie	100	82.060	Hippocampus_comes
ENSECAG00000038706	-	99	85.714	ENSIPUG00000016601	ppie	99	86.047	Ictalurus_punctatus
ENSECAG00000038706	-	100	94.684	ENSSTOG00000010445	PPIE	100	94.684	Ictidomys_tridecemlineatus
ENSECAG00000038706	-	100	94.020	ENSJJAG00000022703	Ppie	100	94.020	Jaculus_jaculus
ENSECAG00000038706	-	100	82.060	ENSKMAG00000013555	ppie	100	82.060	Kryptolebias_marmoratus
ENSECAG00000038706	-	100	85.430	ENSLACG00000011207	PPIE	100	85.430	Latimeria_chalumnae
ENSECAG00000038706	-	100	94.020	ENSLAFG00000028312	-	100	94.020	Loxodonta_africana
ENSECAG00000038706	-	100	98.800	ENSMFAG00000002082	PPIE	100	98.800	Macaca_fascicularis
ENSECAG00000038706	-	100	96.013	ENSMMUG00000018869	PPIE	100	96.013	Macaca_mulatta
ENSECAG00000038706	-	100	98.800	ENSMNEG00000031362	PPIE	100	98.800	Macaca_nemestrina
ENSECAG00000038706	-	100	98.800	ENSMLEG00000040735	PPIE	100	98.800	Mandrillus_leucophaeus
ENSECAG00000038706	-	100	80.464	ENSMAMG00000010005	ppie	100	80.795	Mastacembelus_armatus
ENSECAG00000038706	-	100	82.781	ENSMZEG00005006117	ppie	100	83.113	Maylandia_zebra
ENSECAG00000038706	-	55	91.124	ENSMAUG00000020323	Ppie	100	91.124	Mesocricetus_auratus
ENSECAG00000038706	-	100	94.684	ENSMOCG00000018443	-	100	94.684	Microtus_ochrogaster
ENSECAG00000038706	-	98	91.837	ENSMOCG00000020138	-	82	91.837	Microtus_ochrogaster
ENSECAG00000038706	-	100	81.395	ENSMMOG00000002329	ppie	100	81.395	Mola_mola
ENSECAG00000038706	-	100	90.698	ENSMODG00000017659	PPIE	100	90.698	Monodelphis_domestica
ENSECAG00000038706	-	100	81.126	ENSMALG00000011041	ppie	100	80.795	Monopterus_albus
ENSECAG00000038706	-	100	94.020	MGP_CAROLIEiJ_G0026431	Ppie	100	94.020	Mus_caroli
ENSECAG00000038706	-	100	94.352	ENSMUSG00000028651	Ppie	100	94.352	Mus_musculus
ENSECAG00000038706	-	100	94.020	MGP_PahariEiJ_G0028761	Ppie	100	94.020	Mus_pahari
ENSECAG00000038706	-	100	96.800	MGP_SPRETEiJ_G0027411	Ppie	100	96.800	Mus_spretus
ENSECAG00000038706	-	100	95.364	ENSMPUG00000014345	PPIE	100	95.364	Mustela_putorius_furo
ENSECAG00000038706	-	100	93.355	ENSMLUG00000006201	-	100	93.355	Myotis_lucifugus
ENSECAG00000038706	-	76	93.103	ENSMLUG00000016233	-	100	93.103	Myotis_lucifugus
ENSECAG00000038706	-	97	51.125	ENSMLUG00000027940	-	97	53.000	Myotis_lucifugus
ENSECAG00000038706	-	100	98.800	ENSNLEG00000011979	PPIE	100	98.800	Nomascus_leucogenys
ENSECAG00000038706	-	76	89.177	ENSMEUG00000005090	PPIE	100	89.177	Notamacropus_eugenii
ENSECAG00000038706	-	89	81.852	ENSOPRG00000015178	-	99	81.852	Ochotona_princeps
ENSECAG00000038706	-	100	94.020	ENSODEG00000007670	-	100	94.020	Octodon_degus
ENSECAG00000038706	-	100	72.093	ENSODEG00000013727	-	74	72.093	Octodon_degus
ENSECAG00000038706	-	100	82.450	ENSONIG00000008165	ppie	100	82.781	Oreochromis_niloticus
ENSECAG00000038706	-	100	91.030	ENSOANG00000010003	PPIE	100	89.369	Ornithorhynchus_anatinus
ENSECAG00000038706	-	100	94.684	ENSOCUG00000007665	PPIE	100	94.684	Oryctolagus_cuniculus
ENSECAG00000038706	-	100	82.566	ENSORLG00015015095	ppie	100	82.566	Oryzias_latipes_hsok
ENSECAG00000038706	-	100	82.781	ENSOMEG00000014458	ppie	100	82.781	Oryzias_melastigma
ENSECAG00000038706	-	100	94.079	ENSOGAG00000003620	PPIE	100	94.079	Otolemur_garnettii
ENSECAG00000038706	-	100	94.079	ENSOARG00000020124	PPIE	100	94.079	Ovis_aries
ENSECAG00000038706	-	100	98.400	ENSPPAG00000042403	PPIE	100	98.400	Pan_paniscus
ENSECAG00000038706	-	100	99.200	ENSPPRG00000014232	PPIE	100	99.200	Panthera_pardus
ENSECAG00000038706	-	100	99.200	ENSPTIG00000003196	PPIE	100	99.200	Panthera_tigris_altaica
ENSECAG00000038706	-	100	98.400	ENSPTRG00000000577	PPIE	100	98.400	Pan_troglodytes
ENSECAG00000038706	-	100	98.800	ENSPANG00000000575	PPIE	100	98.800	Papio_anubis
ENSECAG00000038706	-	98	87.458	ENSPSIG00000016383	PPIE	88	87.458	Pelodiscus_sinensis
ENSECAG00000038706	-	100	82.540	ENSPMGG00000009082	ppie	100	82.540	Periophthalmus_magnuspinnatus
ENSECAG00000038706	-	55	91.716	ENSPEMG00000013681	Ppie	100	91.716	Peromyscus_maniculatus_bairdii
ENSECAG00000038706	-	100	90.033	ENSPCIG00000021413	PPIE	100	90.033	Phascolarctos_cinereus
ENSECAG00000038706	-	100	82.119	ENSPFOG00000002535	ppie	100	82.119	Poecilia_formosa
ENSECAG00000038706	-	100	82.392	ENSPLAG00000010126	ppie	100	82.392	Poecilia_latipinna
ENSECAG00000038706	-	100	82.392	ENSPMEG00000019748	ppie	100	82.392	Poecilia_mexicana
ENSECAG00000038706	-	99	82.333	ENSPREG00000001551	ppie	99	82.333	Poecilia_reticulata
ENSECAG00000038706	-	98	95.578	ENSPPYG00000001501	PPIE	98	95.578	Pongo_abelii
ENSECAG00000038706	-	92	94.982	ENSPVAG00000002120	PPIE	100	94.982	Pteropus_vampyrus
ENSECAG00000038706	-	100	83.612	ENSPNYG00000006336	ppie	100	83.946	Pundamilia_nyererei
ENSECAG00000038706	-	100	84.437	ENSPNAG00000007122	ppie	100	84.437	Pygocentrus_nattereri
ENSECAG00000038706	-	100	94.020	ENSRNOG00000014762	Ppie	100	94.020	Rattus_norvegicus
ENSECAG00000038706	-	100	98.800	ENSRBIG00000041625	PPIE	100	98.800	Rhinopithecus_bieti
ENSECAG00000038706	-	100	98.800	ENSRROG00000044935	PPIE	100	98.800	Rhinopithecus_roxellana
ENSECAG00000038706	-	100	98.400	ENSSBOG00000035061	PPIE	100	98.400	Saimiri_boliviensis_boliviensis
ENSECAG00000038706	-	100	89.701	ENSSHAG00000018113	PPIE	100	89.701	Sarcophilus_harrisii
ENSECAG00000038706	-	100	85.050	ENSSFOG00015007542	ppie	100	85.050	Scleropages_formosus
ENSECAG00000038706	-	100	82.119	ENSSMAG00000008993	ppie	100	81.788	Scophthalmus_maximus
ENSECAG00000038706	-	100	82.450	ENSSDUG00000012593	ppie	100	82.450	Seriola_dumerili
ENSECAG00000038706	-	100	82.450	ENSSLDG00000013079	ppie	100	82.450	Seriola_lalandi_dorsalis
ENSECAG00000038706	-	92	90.681	ENSSARG00000005703	PPIE	100	90.681	Sorex_araneus
ENSECAG00000038706	-	95	90.141	ENSSPUG00000003147	PPIE	100	90.141	Sphenodon_punctatus
ENSECAG00000038706	-	100	83.444	ENSSPAG00000009232	ppie	100	83.775	Stegastes_partitus
ENSECAG00000038706	-	98	93.581	ENSSSCG00000003664	-	96	94.828	Sus_scrofa
ENSECAG00000038706	-	76	80.258	ENSTGUG00000001276	PPIE	100	80.258	Taeniopygia_guttata
ENSECAG00000038706	-	100	82.724	ENSTRUG00000006308	ppie	100	82.724	Takifugu_rubripes
ENSECAG00000038706	-	100	82.450	ENSTNIG00000016901	ppie	100	82.781	Tetraodon_nigroviridis
ENSECAG00000038706	-	97	90.508	ENSTTRG00000014385	PPIE	95	90.508	Tursiops_truncatus
ENSECAG00000038706	-	100	99.315	ENSUMAG00000017319	PPIE	100	99.315	Ursus_maritimus
ENSECAG00000038706	-	74	98.370	ENSVPAG00000010049	PPIE	100	82.979	Vicugna_pacos
ENSECAG00000038706	-	100	96.013	ENSVVUG00000005268	-	92	96.013	Vulpes_vulpes
ENSECAG00000038706	-	100	85.714	ENSXETG00000010944	ppie	100	85.714	Xenopus_tropicalis
ENSECAG00000038706	-	100	83.056	ENSXMAG00000019027	ppie	100	83.056	Xiphophorus_maculatus