EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000040139 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 10555 bases
Position: chr22:34975718-34986272
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000027463	RRM_1	PF00076.22	3.1e-34	1	2
ENSECAP00000027463	RRM_1	PF00076.22	3.1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000061776	-	834	-	ENSECAP00000027463	277 (aa)	-	-

Gene Model

Click here to download ENSECAG00000040139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000040139's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000040139	-	88	41.634	ENSECAG00000038200	-	61	41.634
ENSECAG00000040139	-	61	34.615	ENSECAG00000020142	ELAVL2	82	34.615
ENSECAG00000040139	-	61	34.615	ENSECAG00000022284	ELAVL4	87	34.615
ENSECAG00000040139	-	58	30.769	ENSECAG00000009970	TIAL1	85	30.769
ENSECAG00000040139	-	58	44.262	ENSECAG00000002620	-	70	44.262
ENSECAG00000040139	-	78	68.610	ENSECAG00000009396	PABPC4	66	68.610
ENSECAG00000040139	-	69	63.429	ENSECAG00000031416	PABPC4L	91	63.429
ENSECAG00000040139	-	86	66.255	ENSECAG00000020699	PABPC1	68	66.255
ENSECAG00000040139	-	66	33.333	ENSECAG00000020594	ELAVL3	77	33.333
ENSECAG00000040139	-	58	61.935	ENSECAG00000003452	PABPC5	83	61.935

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000040139	-	82	86.957	ENSG00000101104	PABPC1L	88	88.182	Homo_sapiens
ENSECAG00000040139	-	81	68.889	ENSAPOG00000010842	pabpc1l	66	68.889	Acanthochromis_polyacanthus
ENSECAG00000040139	-	71	92.929	ENSAMEG00000004099	PABPC1L	68	77.821	Ailuropoda_melanoleuca
ENSECAG00000040139	-	81	68.000	ENSACIG00000021004	-	79	66.816	Amphilophus_citrinellus
ENSECAG00000040139	-	89	64.372	ENSAOCG00000006167	-	69	64.372	Amphiprion_ocellaris
ENSECAG00000040139	-	89	64.372	ENSAPEG00000010558	-	86	71.503	Amphiprion_percula
ENSECAG00000040139	-	84	65.236	ENSATEG00000007428	pabpc1l	67	65.236	Anabas_testudineus
ENSECAG00000040139	-	81	77.632	ENSAPLG00000008415	PABPC1L	69	77.632	Anas_platyrhynchos
ENSECAG00000040139	-	84	72.574	ENSACAG00000011841	PABPC1L	65	72.574	Anolis_carolinensis
ENSECAG00000040139	-	82	84.348	ENSANAG00000026826	PABPC1L	67	84.348	Aotus_nancymaae
ENSECAG00000040139	-	81	68.000	ENSACLG00000024791	pabpc1l	66	68.000	Astatotilapia_calliptera
ENSECAG00000040139	-	81	72.889	ENSAMXG00000013552	pabpc1l	66	72.889	Astyanax_mexicanus
ENSECAG00000040139	-	54	32.450	ENSBTAG00000055300	-	93	32.450	Bos_taurus
ENSECAG00000040139	-	72	92.000	ENSBTAG00000016849	PABPC1L	67	92.000	Bos_taurus
ENSECAG00000040139	-	58	44.000	ENSCJAG00000038506	-	86	44.000	Callithrix_jacchus
ENSECAG00000040139	-	82	84.783	ENSCJAG00000017628	PABPC1L	67	84.783	Callithrix_jacchus
ENSECAG00000040139	-	83	81.277	ENSCAFG00000009573	PABPC1L	64	81.277	Canis_familiaris
ENSECAG00000040139	-	82	88.158	ENSCAFG00020013828	PABPC1L	67	88.158	Canis_lupus_dingo
ENSECAG00000040139	-	81	90.308	ENSCHIG00000025759	PABPC1L	63	90.308	Capra_hircus
ENSECAG00000040139	-	82	83.983	ENSTSYG00000006645	PABPC1L	71	83.983	Carlito_syrichta
ENSECAG00000040139	-	83	78.879	ENSCAPG00000014519	PABPC1L	63	78.879	Cavia_aperea
ENSECAG00000040139	-	83	81.624	ENSCPOG00000013633	PABPC1L	67	81.624	Cavia_porcellus
ENSECAG00000040139	-	82	83.913	ENSCCAG00000023338	PABPC1L	67	84.783	Cebus_capucinus
ENSECAG00000040139	-	82	86.522	ENSCATG00000034065	PABPC1L	67	86.522	Cercocebus_atys
ENSECAG00000040139	-	83	79.487	ENSCLAG00000005298	PABPC1L	67	80.769	Chinchilla_lanigera
ENSECAG00000040139	-	82	86.522	ENSCSAG00000014242	PABPC1L	67	86.522	Chlorocebus_sabaeus
ENSECAG00000040139	-	58	44.068	ENSCPBG00000007810	-	80	44.068	Chrysemys_picta_bellii
ENSECAG00000040139	-	82	78.788	ENSCPBG00000017755	-	92	78.788	Chrysemys_picta_bellii
ENSECAG00000040139	-	80	55.745	ENSCING00000002796	-	58	55.745	Ciona_intestinalis
ENSECAG00000040139	-	80	59.009	ENSCSAVG00000004246	-	71	56.087	Ciona_savignyi
ENSECAG00000040139	-	85	51.822	ENSCSAVG00000003102	-	98	56.109	Ciona_savignyi
ENSECAG00000040139	-	82	86.522	ENSCANG00000037530	PABPC1L	67	86.522	Colobus_angolensis_palliatus
ENSECAG00000040139	-	89	69.721	ENSCGRG00001021938	Pabpc1l	69	69.721	Cricetulus_griseus_chok1gshd
ENSECAG00000040139	-	89	69.721	ENSCGRG00000007946	Pabpc1l	69	69.721	Cricetulus_griseus_crigri
ENSECAG00000040139	-	82	65.639	ENSCSEG00000021295	pabpc1l	71	65.639	Cynoglossus_semilaevis
ENSECAG00000040139	-	83	66.522	ENSCVAG00000015943	-	73	64.783	Cyprinodon_variegatus
ENSECAG00000040139	-	86	66.527	ENSDARG00000002597	pabpc1l	75	66.527	Danio_rerio
ENSECAG00000040139	-	81	89.520	ENSDNOG00000048450	PABPC1L	67	89.520	Dasypus_novemcinctus
ENSECAG00000040139	-	81	82.969	ENSDORG00000001067	Pabpc1l	67	82.969	Dipodomys_ordii
ENSECAG00000040139	-	54	31.788	ENSEASG00005023408	-	93	31.788	Equus_asinus_asinus
ENSECAG00000040139	-	89	80.374	ENSEASG00005023407	-	85	80.374	Equus_asinus_asinus
ENSECAG00000040139	-	81	87.719	ENSEEUG00000005978	PABPC1L	67	87.719	Erinaceus_europaeus
ENSECAG00000040139	-	84	67.373	ENSELUG00000001811	pabpc1l	72	68.919	Esox_lucius
ENSECAG00000040139	-	82	89.035	ENSFCAG00000011692	PABPC1L	67	89.035	Felis_catus
ENSECAG00000040139	-	83	77.682	ENSFALG00000005372	PABPC1L	70	77.682	Ficedula_albicollis
ENSECAG00000040139	-	87	80.972	ENSFDAG00000008291	PABPC1L	70	80.080	Fukomys_damarensis
ENSECAG00000040139	-	88	65.984	ENSFHEG00000003398	pabpc1l	75	65.984	Fundulus_heteroclitus
ENSECAG00000040139	-	85	66.807	ENSGMOG00000004437	pabpc1l	65	69.027	Gadus_morhua
ENSECAG00000040139	-	81	77.632	ENSGALG00000004123	PABPC1L	90	82.828	Gallus_gallus
ENSECAG00000040139	-	88	63.525	ENSGAFG00000021057	pabpc1l	70	63.525	Gambusia_affinis
ENSECAG00000040139	-	82	66.812	ENSGACG00000002792	pabpc1l	66	66.812	Gasterosteus_aculeatus
ENSECAG00000040139	-	81	78.070	ENSGAGG00000000589	PABPC1L	68	83.333	Gopherus_agassizii
ENSECAG00000040139	-	82	86.957	ENSGGOG00000004584	PABPC1L	67	86.957	Gorilla_gorilla
ENSECAG00000040139	-	81	68.000	ENSHBUG00000006134	pabpc1l	71	66.518	Haplochromis_burtoni
ENSECAG00000040139	-	89	80.080	ENSHGLG00000008434	PABPC1L	68	80.080	Heterocephalus_glaber_female
ENSECAG00000040139	-	89	80.080	ENSHGLG00100012151	PABPC1L	68	80.080	Heterocephalus_glaber_male
ENSECAG00000040139	-	55	33.333	ENSHGLG00100019506	-	76	33.333	Heterocephalus_glaber_male
ENSECAG00000040139	-	84	68.644	ENSHCOG00000009270	pabpc1l	65	75.258	Hippocampus_comes
ENSECAG00000040139	-	83	71.429	ENSIPUG00000012602	pabpc1l	70	73.333	Ictalurus_punctatus
ENSECAG00000040139	-	81	86.463	ENSSTOG00000003739	PABPC1L	67	86.463	Ictidomys_tridecemlineatus
ENSECAG00000040139	-	85	71.255	ENSJJAG00000022406	Pabpc1l	60	71.255	Jaculus_jaculus
ENSECAG00000040139	-	84	67.382	ENSKMAG00000016847	pabpc1l	73	67.382	Kryptolebias_marmoratus
ENSECAG00000040139	-	84	63.948	ENSLBEG00000010084	pabpc1l	66	64.977	Labrus_bergylta
ENSECAG00000040139	-	84	71.008	ENSLACG00000005762	PABPC1L	76	71.008	Latimeria_chalumnae
ENSECAG00000040139	-	83	70.513	ENSLOCG00000007519	pabpc1l	65	70.513	Lepisosteus_oculatus
ENSECAG00000040139	-	83	85.532	ENSLAFG00000003553	PABPC1L	67	85.532	Loxodonta_africana
ENSECAG00000040139	-	82	86.522	ENSMFAG00000040365	PABPC1L	67	86.522	Macaca_fascicularis
ENSECAG00000040139	-	82	86.522	ENSMNEG00000032298	PABPC1L	67	86.522	Macaca_nemestrina
ENSECAG00000040139	-	82	86.522	ENSMLEG00000043139	PABPC1L	67	86.522	Mandrillus_leucophaeus
ENSECAG00000040139	-	84	64.378	ENSMAMG00000011854	pabpc1l	67	64.378	Mastacembelus_armatus
ENSECAG00000040139	-	81	68.000	ENSMZEG00005023713	pabpc1l	66	68.000	Maylandia_zebra
ENSECAG00000040139	-	81	77.974	ENSMGAG00000003674	PABPC1L	65	77.974	Meleagris_gallopavo
ENSECAG00000040139	-	83	72.103	ENSMOCG00000013186	Pabpc1l	67	72.103	Microtus_ochrogaster
ENSECAG00000040139	-	86	63.180	ENSMMOG00000020574	-	72	64.378	Mola_mola
ENSECAG00000040139	-	81	76.371	ENSMODG00000016198	PABPC1L	70	76.695	Monodelphis_domestica
ENSECAG00000040139	-	84	64.807	ENSMALG00000021622	pabpc1l	68	64.807	Monopterus_albus
ENSECAG00000040139	-	83	75.107	MGP_CAROLIEiJ_G0024627	Pabpc1l	69	70.916	Mus_caroli
ENSECAG00000040139	-	89	70.916	ENSMUSG00000054582	Pabpc1l	69	70.916	Mus_musculus
ENSECAG00000040139	-	83	74.678	MGP_PahariEiJ_G0026071	Pabpc1l	67	74.678	Mus_pahari
ENSECAG00000040139	-	89	70.916	MGP_SPRETEiJ_G0025549	Pabpc1l	69	70.916	Mus_spretus
ENSECAG00000040139	-	82	89.035	ENSMPUG00000017646	PABPC1L	66	89.035	Mustela_putorius_furo
ENSECAG00000040139	-	90	78.175	ENSMLUG00000006324	PABPC1L	68	78.175	Myotis_lucifugus
ENSECAG00000040139	-	83	77.253	ENSNGAG00000010458	Pabpc1l	67	77.253	Nannospalax_galili
ENSECAG00000040139	-	83	66.379	ENSNBRG00000016633	pabpc1l	81	66.379	Neolamprologus_brichardi
ENSECAG00000040139	-	85	75.519	ENSMEUG00000007905	-	68	75.519	Notamacropus_eugenii
ENSECAG00000040139	-	81	83.843	ENSOPRG00000011846	PABPC1L	67	83.843	Ochotona_princeps
ENSECAG00000040139	-	78	81.395	ENSODEG00000015482	PABPC1L	70	81.395	Octodon_degus
ENSECAG00000040139	-	51	34.722	ENSODEG00000002920	-	80	34.722	Octodon_degus
ENSECAG00000040139	-	81	68.000	ENSONIG00000017314	pabpc1l	65	68.000	Oreochromis_niloticus
ENSECAG00000040139	-	81	76.531	ENSOANG00000015793	-	62	76.531	Ornithorhynchus_anatinus
ENSECAG00000040139	-	81	78.166	ENSOCUG00000003005	PABPC1L	63	78.166	Oryctolagus_cuniculus
ENSECAG00000040139	-	96	62.172	ENSORLG00000010322	pabpc1l	81	65.844	Oryzias_latipes
ENSECAG00000040139	-	96	62.406	ENSORLG00020021193	pabpc1l	81	65.844	Oryzias_latipes_hni
ENSECAG00000040139	-	96	62.406	ENSORLG00015017018	pabpc1l	81	65.844	Oryzias_latipes_hsok
ENSECAG00000040139	-	96	62.547	ENSOMEG00000010789	pabpc1l	69	62.547	Oryzias_melastigma
ENSECAG00000040139	-	81	88.646	ENSOGAG00000032999	PABPC1L	66	88.646	Otolemur_garnettii
ENSECAG00000040139	-	81	91.189	ENSOARG00000004578	PABPC1L	66	91.189	Ovis_aries
ENSECAG00000040139	-	82	86.957	ENSPPAG00000039677	PABPC1L	67	86.957	Pan_paniscus
ENSECAG00000040139	-	62	57.273	ENSPPRG00000019327	-	86	57.273	Panthera_pardus
ENSECAG00000040139	-	82	89.035	ENSPTIG00000006524	PABPC1L	68	89.035	Panthera_tigris_altaica
ENSECAG00000040139	-	62	88.182	ENSPTRG00000013531	PABPC1L	88	88.182	Pan_troglodytes
ENSECAG00000040139	-	82	86.522	ENSPANG00000018788	PABPC1L	67	86.522	Papio_anubis
ENSECAG00000040139	-	85	70.168	ENSPKIG00000007322	pabpc1l	72	70.168	Paramormyrops_kingsleyae
ENSECAG00000040139	-	71	81.818	ENSPSIG00000013289	PABPC1L	90	81.818	Pelodiscus_sinensis
ENSECAG00000040139	-	81	66.839	ENSPMGG00000023121	-	90	66.839	Periophthalmus_magnuspinnatus
ENSECAG00000040139	-	58	39.252	ENSPMGG00000023117	pabpc1l	82	39.252	Periophthalmus_magnuspinnatus
ENSECAG00000040139	-	89	70.518	ENSPEMG00000020671	Pabpc1l	69	70.518	Peromyscus_maniculatus_bairdii
ENSECAG00000040139	-	88	63.525	ENSPFOG00000013241	pabpc1l	69	63.525	Poecilia_formosa
ENSECAG00000040139	-	88	63.525	ENSPLAG00000017490	-	72	67.857	Poecilia_latipinna
ENSECAG00000040139	-	88	63.525	ENSPMEG00000007677	pabpc1l	70	63.525	Poecilia_mexicana
ENSECAG00000040139	-	70	72.917	ENSPREG00000015886	pabpc1l	91	72.917	Poecilia_reticulata
ENSECAG00000040139	-	82	86.522	ENSPPYG00000011042	PABPC1L	67	86.522	Pongo_abelii
ENSECAG00000040139	-	71	62.626	ENSPCAG00000011787	-	59	62.626	Procavia_capensis
ENSECAG00000040139	-	81	88.596	ENSPCOG00000020630	PABPC1L	67	88.596	Propithecus_coquereli
ENSECAG00000040139	-	89	78.629	ENSPVAG00000012663	PABPC1L	68	78.629	Pteropus_vampyrus
ENSECAG00000040139	-	83	66.379	ENSPNYG00000004101	pabpc1l	81	66.379	Pundamilia_nyererei
ENSECAG00000040139	-	83	53.913	ENSPNAG00000021248	pabpc1l	65	53.913	Pygocentrus_nattereri
ENSECAG00000040139	-	87	69.600	ENSRNOG00000012750	Pabpc1l	71	68.359	Rattus_norvegicus
ENSECAG00000040139	-	82	86.522	ENSRBIG00000035381	PABPC1L	67	86.522	Rhinopithecus_bieti
ENSECAG00000040139	-	82	86.522	ENSRROG00000044498	PABPC1L	67	86.522	Rhinopithecus_roxellana
ENSECAG00000040139	-	82	84.783	ENSSBOG00000009532	-	67	84.783	Saimiri_boliviensis_boliviensis
ENSECAG00000040139	-	81	77.729	ENSSHAG00000011446	PABPC1L	64	77.729	Sarcophilus_harrisii
ENSECAG00000040139	-	84	70.638	ENSSFOG00015017304	pabpc1l	66	70.638	Scleropages_formosus
ENSECAG00000040139	-	88	62.651	ENSSMAG00000010516	pabpc1l	76	62.651	Scophthalmus_maximus
ENSECAG00000040139	-	84	67.382	ENSSDUG00000014743	pabpc1l	68	67.382	Seriola_dumerili
ENSECAG00000040139	-	81	70.404	ENSSLDG00000006981	pabpc1l	77	67.965	Seriola_lalandi_dorsalis
ENSECAG00000040139	-	81	75.000	ENSSPUG00000004233	PABPC1L	64	75.000	Sphenodon_punctatus
ENSECAG00000040139	-	85	65.401	ENSSPAG00000017137	pabpc1l	75	65.401	Stegastes_partitus
ENSECAG00000040139	-	85	84.454	ENSSSCG00000007382	PABPC1L	69	84.454	Sus_scrofa
ENSECAG00000040139	-	81	75.417	ENSTGUG00000005114	PABPC1L	66	75.417	Taeniopygia_guttata
ENSECAG00000040139	-	81	66.816	ENSTRUG00000011085	pabpc1l	65	66.816	Takifugu_rubripes
ENSECAG00000040139	-	81	66.964	ENSTNIG00000017903	pabpc1l	64	66.964	Tetraodon_nigroviridis
ENSECAG00000040139	-	81	85.022	ENSTTRG00000007618	PABPC1L	69	85.022	Tursiops_truncatus
ENSECAG00000040139	-	81	89.868	ENSUAMG00000017682	PABPC1L	69	89.868	Ursus_americanus
ENSECAG00000040139	-	82	82.895	ENSUMAG00000025436	PABPC1L	85	82.895	Ursus_maritimus
ENSECAG00000040139	-	91	88.722	ENSVVUG00000018939	PABPC1L	72	85.200	Vulpes_vulpes
ENSECAG00000040139	-	81	66.228	ENSXETG00000022831	pabpc1l	64	66.228	Xenopus_tropicalis
ENSECAG00000040139	-	88	63.525	ENSXCOG00000005459	pabpc1l	80	65.517	Xiphophorus_couchianus
ENSECAG00000040139	-	88	63.525	ENSXMAG00000017135	pabpc1l	72	67.857	Xiphophorus_maculatus