EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000040564 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 8407 bases
Position: chrX:79411072-79419478
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000037252	RRM_1	PF00076.22	2.7e-27	1	2
ENSECAP00000037252	RRM_1	PF00076.22	2.7e-27	2	2
ENSECAP00000038064	RRM_1	PF00076.22	3.3e-27	1	2
ENSECAP00000038064	RRM_1	PF00076.22	3.3e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000046706	-	909	-	ENSECAP00000037252	302 (aa)	-	-
ENSECAT00000045905	-	1008	-	ENSECAP00000038064	335 (aa)	-	-

Gene Model

Click here to download ENSECAG00000040564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000040564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000040564	-	59	43.243	ENSECAG00000011435	MSI2	60	43.243
ENSECAG00000040564	-	62	33.714	ENSECAG00000023237	HNRNPA3	55	32.258
ENSECAG00000040564	-	60	42.021	ENSECAG00000017526	MSI1	50	43.169
ENSECAG00000040564	-	79	55.918	ENSECAG00000022692	HNRNPDL	76	51.316
ENSECAG00000040564	-	54	32.353	ENSECAG00000028129	-	68	32.020
ENSECAG00000040564	-	59	55.307	ENSECAG00000018242	-	88	44.863
ENSECAG00000040564	-	81	49.774	ENSECAG00000009344	HNRNPD	82	41.558
ENSECAG00000040564	-	54	44.785	ENSECAG00000037355	-	57	44.785
ENSECAG00000040564	-	54	30.588	ENSECAG00000006699	-	61	30.256
ENSECAG00000040564	-	58	30.337	ENSECAG00000008338	TARDBP	58	30.337
ENSECAG00000040564	-	62	32.353	ENSECAG00000008676	HNRNPA1	61	31.795
ENSECAG00000040564	-	54	31.765	ENSECAG00000032164	HNRNPA0	56	31.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000040564	-	78	56.067	ENSG00000152795	HNRNPDL	99	51.342	Homo_sapiens
ENSECAG00000040564	-	78	56.118	ENSAMEG00000005145	-	83	49.840	Ailuropoda_melanoleuca
ENSECAG00000040564	-	86	43.299	ENSAMEG00000007660	-	97	43.878	Ailuropoda_melanoleuca
ENSECAG00000040564	-	83	50.566	ENSAPLG00000011774	HNRNPDL	99	52.060	Anas_platyrhynchos
ENSECAG00000040564	-	86	52.055	ENSACAG00000010416	HNRNPDL	92	52.055	Anolis_carolinensis
ENSECAG00000040564	-	78	54.393	ENSANAG00000035355	-	90	54.472	Aotus_nancymaae
ENSECAG00000040564	-	86	53.061	ENSANAG00000030316	-	93	47.087	Aotus_nancymaae
ENSECAG00000040564	-	75	48.819	ENSANAG00000038001	-	99	46.488	Aotus_nancymaae
ENSECAG00000040564	-	72	41.870	ENSANAG00000035255	-	99	41.870	Aotus_nancymaae
ENSECAG00000040564	-	78	56.067	ENSANAG00000029054	HNRNPDL	78	48.795	Aotus_nancymaae
ENSECAG00000040564	-	85	49.310	ENSAMXG00000001495	hnrnpdl	96	49.667	Astyanax_mexicanus
ENSECAG00000040564	-	79	55.918	ENSBTAG00000014804	HNRNPDL	78	48.348	Bos_taurus
ENSECAG00000040564	-	79	55.918	ENSCJAG00000015197	-	78	48.657	Callithrix_jacchus
ENSECAG00000040564	-	63	62.105	ENSCJAG00000045227	-	81	55.022	Callithrix_jacchus
ENSECAG00000040564	-	72	52.066	ENSCAFG00000000776	-	99	47.887	Canis_familiaris
ENSECAG00000040564	-	79	55.918	ENSCAFG00000008940	HNRNPDL	78	48.657	Canis_familiaris
ENSECAG00000040564	-	79	55.918	ENSCAFG00020010699	-	78	48.657	Canis_lupus_dingo
ENSECAG00000040564	-	79	55.918	ENSCHIG00000010260	-	78	48.348	Capra_hircus
ENSECAG00000040564	-	83	46.753	ENSCHIG00000026667	-	63	46.753	Capra_hircus
ENSECAG00000040564	-	75	46.245	ENSTSYG00000036907	-	95	49.758	Carlito_syrichta
ENSECAG00000040564	-	81	58.411	ENSTSYG00000031074	-	100	52.941	Carlito_syrichta
ENSECAG00000040564	-	63	44.651	ENSCAPG00000015955	-	100	41.852	Cavia_aperea
ENSECAG00000040564	-	76	56.838	ENSCPOG00000015619	-	73	51.877	Cavia_porcellus
ENSECAG00000040564	-	66	63.804	ENSCCAG00000020531	-	80	61.272	Cebus_capucinus
ENSECAG00000040564	-	78	56.067	ENSCCAG00000020777	HNRNPDL	78	48.494	Cebus_capucinus
ENSECAG00000040564	-	81	58.685	ENSCATG00000038573	-	69	52.941	Cercocebus_atys
ENSECAG00000040564	-	65	60.396	ENSCATG00000030349	-	89	60.396	Cercocebus_atys
ENSECAG00000040564	-	87	52.985	ENSCLAG00000008428	HNRNPDL	77	49.235	Chinchilla_lanigera
ENSECAG00000040564	-	85	42.955	ENSCLAG00000010786	-	98	43.643	Chinchilla_lanigera
ENSECAG00000040564	-	78	56.067	ENSCSAG00000004461	HNRNPDL	78	48.494	Chlorocebus_sabaeus
ENSECAG00000040564	-	74	57.277	ENSCHOG00000002938	-	100	52.206	Choloepus_hoffmanni
ENSECAG00000040564	-	76	56.223	ENSCHOG00000000160	-	100	51.712	Choloepus_hoffmanni
ENSECAG00000040564	-	81	54.902	ENSCHOG00000009204	-	100	49.810	Choloepus_hoffmanni
ENSECAG00000040564	-	98	46.224	ENSCHOG00000003275	-	97	46.224	Choloepus_hoffmanni
ENSECAG00000040564	-	82	51.264	ENSCHOG00000010831	-	97	48.193	Choloepus_hoffmanni
ENSECAG00000040564	-	86	51.877	ENSCPBG00000008014	HNRNPDL	97	52.560	Chrysemys_picta_bellii
ENSECAG00000040564	-	81	58.685	ENSCANG00000020228	-	100	52.941	Colobus_angolensis_palliatus
ENSECAG00000040564	-	82	57.870	ENSCGRG00001010960	Hnrnpdl	87	52.555	Cricetulus_griseus_chok1gshd
ENSECAG00000040564	-	81	56.306	ENSCGRG00000011361	-	99	51.246	Cricetulus_griseus_crigri
ENSECAG00000040564	-	61	60.656	ENSDARG00000003429	hnrnpdl	96	47.782	Danio_rerio
ENSECAG00000040564	-	75	46.753	ENSDNOG00000034016	-	84	46.809	Dasypus_novemcinctus
ENSECAG00000040564	-	63	62.632	ENSDNOG00000033765	-	86	59.048	Dasypus_novemcinctus
ENSECAG00000040564	-	78	53.556	ENSDNOG00000033760	-	89	50.542	Dasypus_novemcinctus
ENSECAG00000040564	-	62	50.265	ENSDNOG00000046422	-	98	50.265	Dasypus_novemcinctus
ENSECAG00000040564	-	87	49.664	ENSDNOG00000018280	-	96	49.664	Dasypus_novemcinctus
ENSECAG00000040564	-	90	52.381	ENSDNOG00000003887	-	78	48.494	Dasypus_novemcinctus
ENSECAG00000040564	-	78	52.720	ENSDORG00000024157	-	99	49.329	Dipodomys_ordii
ENSECAG00000040564	-	78	56.067	ENSDORG00000000968	-	71	51.342	Dipodomys_ordii
ENSECAG00000040564	-	100	95.362	ENSEASG00005012961	-	100	95.362	Equus_asinus_asinus
ENSECAG00000040564	-	79	55.918	ENSEASG00005016276	-	78	48.657	Equus_asinus_asinus
ENSECAG00000040564	-	84	53.077	ENSEEUG00000004301	-	77	48.624	Erinaceus_europaeus
ENSECAG00000040564	-	85	48.454	ENSELUG00000003241	hnrnpdl	96	48.299	Esox_lucius
ENSECAG00000040564	-	78	56.067	ENSFCAG00000000455	HNRNPDL	78	48.494	Felis_catus
ENSECAG00000040564	-	85	51.195	ENSFALG00000005709	HNRNPDL	97	52.365	Ficedula_albicollis
ENSECAG00000040564	-	88	45.504	ENSFDAG00000002891	-	100	45.504	Fukomys_damarensis
ENSECAG00000040564	-	81	58.685	ENSFDAG00000000851	-	99	52.941	Fukomys_damarensis
ENSECAG00000040564	-	85	51.195	ENSGALG00000023199	HNRNPDL	96	52.542	Gallus_gallus
ENSECAG00000040564	-	86	50.853	ENSGAGG00000003646	HNRNPDL	97	51.877	Gopherus_agassizii
ENSECAG00000040564	-	78	56.067	ENSGGOG00000003714	HNRNPDL	78	48.494	Gorilla_gorilla
ENSECAG00000040564	-	63	61.053	ENSHGLG00000014427	-	95	57.009	Heterocephalus_glaber_female
ENSECAG00000040564	-	77	52.874	ENSHGLG00000013420	-	91	52.015	Heterocephalus_glaber_female
ENSECAG00000040564	-	87	53.358	ENSHGLG00000015791	HNRNPDL	77	49.541	Heterocephalus_glaber_female
ENSECAG00000040564	-	63	48.947	ENSHGLG00100016282	-	99	41.275	Heterocephalus_glaber_male
ENSECAG00000040564	-	78	48.760	ENSHGLG00100017644	-	100	45.364	Heterocephalus_glaber_male
ENSECAG00000040564	-	87	53.358	ENSHGLG00100005262	HNRNPDL	96	49.541	Heterocephalus_glaber_male
ENSECAG00000040564	-	59	60.112	ENSHGLG00100010072	-	82	53.247	Heterocephalus_glaber_male
ENSECAG00000040564	-	86	47.710	ENSHGLG00100019080	-	99	45.192	Heterocephalus_glaber_male
ENSECAG00000040564	-	61	63.388	ENSIPUG00000024951	hnrnpdl	96	49.485	Ictalurus_punctatus
ENSECAG00000040564	-	78	56.067	ENSSTOG00000013979	HNRNPDL	78	48.494	Ictidomys_tridecemlineatus
ENSECAG00000040564	-	71	56.744	ENSJJAG00000000674	-	77	54.043	Jaculus_jaculus
ENSECAG00000040564	-	84	54.118	ENSJJAG00000021673	Hnrnpdl	77	48.795	Jaculus_jaculus
ENSECAG00000040564	-	66	60.000	ENSLACG00000003613	HNRNPDL	81	57.554	Latimeria_chalumnae
ENSECAG00000040564	-	61	63.043	ENSLOCG00000010736	hnrnpdl	97	50.342	Lepisosteus_oculatus
ENSECAG00000040564	-	81	58.411	ENSLAFG00000008612	HNRNPDL	92	52.747	Loxodonta_africana
ENSECAG00000040564	-	83	52.256	ENSLAFG00000031444	-	98	54.074	Loxodonta_africana
ENSECAG00000040564	-	78	56.067	ENSMFAG00000002275	HNRNPDL	78	48.494	Macaca_fascicularis
ENSECAG00000040564	-	74	54.777	ENSMMUG00000015777	HNRNPDL	95	58.411	Macaca_mulatta
ENSECAG00000040564	-	78	56.067	ENSMNEG00000045130	HNRNPDL	78	48.494	Macaca_nemestrina
ENSECAG00000040564	-	87	47.841	ENSMLEG00000014825	-	99	48.993	Mandrillus_leucophaeus
ENSECAG00000040564	-	78	56.067	ENSMLEG00000041600	HNRNPDL	99	51.342	Mandrillus_leucophaeus
ENSECAG00000040564	-	83	52.518	ENSMGAG00000008033	HNRNPDL	100	52.899	Meleagris_gallopavo
ENSECAG00000040564	-	82	57.870	ENSMAUG00000011132	Hnrnpdl	87	52.555	Mesocricetus_auratus
ENSECAG00000040564	-	78	55.649	ENSMICG00000001445	-	78	48.494	Microcebus_murinus
ENSECAG00000040564	-	63	61.053	ENSMICG00000037040	-	86	61.053	Microcebus_murinus
ENSECAG00000040564	-	78	55.462	ENSMOCG00000015928	Hnrnpdl	78	48.358	Microtus_ochrogaster
ENSECAG00000040564	-	63	61.053	ENSMODG00000006825	-	86	57.895	Monodelphis_domestica
ENSECAG00000040564	-	87	53.731	ENSMODG00000011916	-	77	49.847	Monodelphis_domestica
ENSECAG00000040564	-	85	53.462	ENSMUSG00000029328	Hnrnpdl	99	49.226	Mus_musculus
ENSECAG00000040564	-	79	70.051	MGP_PahariEiJ_G0031916	-	53	70.051	Mus_pahari
ENSECAG00000040564	-	78	56.067	MGP_PahariEiJ_G0017226	Hnrnpdl	99	49.226	Mus_pahari
ENSECAG00000040564	-	78	56.067	MGP_SPRETEiJ_G0028445	Hnrnpdl	99	49.226	Mus_spretus
ENSECAG00000040564	-	88	50.373	ENSMPUG00000009986	-	99	47.706	Mustela_putorius_furo
ENSECAG00000040564	-	75	45.669	ENSMPUG00000006259	-	100	43.706	Mustela_putorius_furo
ENSECAG00000040564	-	81	57.353	ENSMPUG00000014753	-	99	51.711	Mustela_putorius_furo
ENSECAG00000040564	-	79	44.402	ENSMPUG00000011188	-	99	44.402	Mustela_putorius_furo
ENSECAG00000040564	-	85	56.849	ENSMLUG00000030192	-	100	56.849	Myotis_lucifugus
ENSECAG00000040564	-	81	43.590	ENSMLUG00000025989	-	88	45.091	Myotis_lucifugus
ENSECAG00000040564	-	79	55.967	ENSMLUG00000014452	-	78	48.358	Myotis_lucifugus
ENSECAG00000040564	-	88	51.661	ENSNGAG00000015740	Hnrnpdl	78	48.036	Nannospalax_galili
ENSECAG00000040564	-	78	56.067	ENSNLEG00000008636	HNRNPDL	85	62.632	Nomascus_leucogenys
ENSECAG00000040564	-	72	59.361	ENSMEUG00000011454	-	88	59.361	Notamacropus_eugenii
ENSECAG00000040564	-	86	46.591	ENSMEUG00000010033	HNRNPDL	96	43.653	Notamacropus_eugenii
ENSECAG00000040564	-	81	58.216	ENSOPRG00000007178	-	100	52.941	Ochotona_princeps
ENSECAG00000040564	-	79	51.452	ENSODEG00000004187	-	99	47.987	Octodon_degus
ENSECAG00000040564	-	78	56.067	ENSODEG00000003135	-	100	51.186	Octodon_degus
ENSECAG00000040564	-	78	56.067	ENSODEG00000002106	-	69	53.091	Octodon_degus
ENSECAG00000040564	-	99	47.024	ENSODEG00000020231	-	94	47.024	Octodon_degus
ENSECAG00000040564	-	90	52.688	ENSODEG00000000376	-	85	51.342	Octodon_degus
ENSECAG00000040564	-	81	58.491	ENSOANG00000004651	HNRNPDL	100	52.768	Ornithorhynchus_anatinus
ENSECAG00000040564	-	72	68.571	ENSOCUG00000025252	-	83	66.298	Oryctolagus_cuniculus
ENSECAG00000040564	-	87	51.119	ENSOCUG00000013805	-	79	46.646	Oryctolagus_cuniculus
ENSECAG00000040564	-	87	60.884	ENSOGAG00000024995	-	99	60.870	Otolemur_garnettii
ENSECAG00000040564	-	59	62.011	ENSOGAG00000031703	-	90	58.537	Otolemur_garnettii
ENSECAG00000040564	-	79	55.187	ENSOGAG00000002501	-	78	48.494	Otolemur_garnettii
ENSECAG00000040564	-	81	57.399	ENSOARG00000000824	-	87	52.128	Ovis_aries
ENSECAG00000040564	-	66	64.706	ENSOARG00000011472	-	67	60.526	Ovis_aries
ENSECAG00000040564	-	66	53.061	ENSOARG00000002402	-	73	50.463	Ovis_aries
ENSECAG00000040564	-	78	56.067	ENSPPAG00000043177	HNRNPDL	78	48.795	Pan_paniscus
ENSECAG00000040564	-	78	56.067	ENSPPRG00000013787	HNRNPDL	78	48.494	Panthera_pardus
ENSECAG00000040564	-	78	56.067	ENSPTIG00000018505	HNRNPDL	99	51.342	Panthera_tigris_altaica
ENSECAG00000040564	-	78	56.067	ENSPTRG00000016217	HNRNPDL	78	48.795	Pan_troglodytes
ENSECAG00000040564	-	78	56.067	ENSPANG00000004761	HNRNPDL	78	48.494	Papio_anubis
ENSECAG00000040564	-	85	49.485	ENSPKIG00000025514	hnrnpdl	96	49.485	Paramormyrops_kingsleyae
ENSECAG00000040564	-	86	51.195	ENSPSIG00000016746	HNRNPDL	87	52.218	Pelodiscus_sinensis
ENSECAG00000040564	-	82	57.674	ENSPEMG00000016545	-	92	52.381	Peromyscus_maniculatus_bairdii
ENSECAG00000040564	-	56	61.176	ENSPCIG00000008965	-	81	61.176	Phascolarctos_cinereus
ENSECAG00000040564	-	87	54.478	ENSPCIG00000003089	-	77	50.459	Phascolarctos_cinereus
ENSECAG00000040564	-	59	55.618	ENSPCIG00000009814	-	67	55.618	Phascolarctos_cinereus
ENSECAG00000040564	-	78	56.067	ENSPPYG00000014886	HNRNPDL	78	48.494	Pongo_abelii
ENSECAG00000040564	-	81	58.685	ENSPCAG00000011543	HNRNPDL	65	52.941	Procavia_capensis
ENSECAG00000040564	-	78	55.649	ENSPCOG00000019831	-	78	48.060	Propithecus_coquereli
ENSECAG00000040564	-	78	47.699	ENSPVAG00000006816	HNRNPDL	78	42.771	Pteropus_vampyrus
ENSECAG00000040564	-	61	63.388	ENSPNAG00000016380	hnrnpdl	90	52.060	Pygocentrus_nattereri
ENSECAG00000040564	-	90	51.648	ENSRNOG00000002270	Hnrnpdl	85	53.285	Rattus_norvegicus
ENSECAG00000040564	-	78	56.067	ENSRBIG00000030310	HNRNPDL	78	48.494	Rhinopithecus_bieti
ENSECAG00000040564	-	78	56.067	ENSRROG00000034174	HNRNPDL	78	48.494	Rhinopithecus_roxellana
ENSECAG00000040564	-	78	49.791	ENSSBOG00000020566	-	99	46.309	Saimiri_boliviensis_boliviensis
ENSECAG00000040564	-	62	42.246	ENSSBOG00000028904	-	99	40.244	Saimiri_boliviensis_boliviensis
ENSECAG00000040564	-	51	55.195	ENSSBOG00000022627	-	99	41.414	Saimiri_boliviensis_boliviensis
ENSECAG00000040564	-	87	53.731	ENSSHAG00000013616	-	86	49.847	Sarcophilus_harrisii
ENSECAG00000040564	-	85	50.000	ENSSFOG00015005893	hnrnpdl	96	50.167	Scleropages_formosus
ENSECAG00000040564	-	70	52.174	ENSSARG00000009961	-	98	47.325	Sorex_araneus
ENSECAG00000040564	-	86	50.853	ENSSPUG00000013700	HNRNPDL	97	52.041	Sphenodon_punctatus
ENSECAG00000040564	-	78	56.067	ENSSSCG00000037245	-	78	48.193	Sus_scrofa
ENSECAG00000040564	-	100	60.405	ENSSSCG00000012473	-	100	60.405	Sus_scrofa
ENSECAG00000040564	-	83	51.460	ENSTGUG00000002850	HNRNPDL	100	52.899	Taeniopygia_guttata
ENSECAG00000040564	-	79	55.918	ENSTBEG00000002817	-	75	50.993	Tupaia_belangeri
ENSECAG00000040564	-	79	55.918	ENSTTRG00000001793	-	72	50.658	Tursiops_truncatus
ENSECAG00000040564	-	78	56.067	ENSUAMG00000011358	HNRNPDL	78	48.494	Ursus_americanus
ENSECAG00000040564	-	78	56.067	ENSUMAG00000008681	HNRNPDL	78	48.494	Ursus_maritimus
ENSECAG00000040564	-	70	45.070	ENSVPAG00000002422	-	92	43.373	Vicugna_pacos
ENSECAG00000040564	-	70	48.023	ENSVVUG00000001421	-	92	48.023	Vulpes_vulpes
ENSECAG00000040564	-	76	55.172	ENSVVUG00000013596	-	97	51.014	Vulpes_vulpes
ENSECAG00000040564	-	78	55.649	ENSVVUG00000024653	HNRNPDL	78	48.193	Vulpes_vulpes
ENSECAG00000040564	-	87	48.322	ENSXETG00000023026	hnrnpdl	100	48.860	Xenopus_tropicalis