EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000000013 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 34545 bases
Position: chrGeneScaffold_5035:6769-41313
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000000010	DND1_DSRM	PF14709.7	1.2e-08	1	1
ENSEEUP00000000010	RRM_1	PF00076.22	7.1e-23	1	2
ENSEEUP00000000010	RRM_1	PF00076.22	7.1e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000000013	A1CF-201	1374	-	ENSEEUP00000000010	458 (aa)	-	UPI0000F633C6

Gene Model

Click here to download ENSEEUG00000000013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000000013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000000013	A1CF	100	81.441	ENSG00000148584	A1CF	61	99.187	Homo_sapiens
ENSEEUG00000000013	A1CF	97	65.848	ENSAPOG00000008259	a1cf	79	65.086	Acanthochromis_polyacanthus
ENSEEUG00000000013	A1CF	96	81.696	ENSAMEG00000000523	A1CF	78	80.472	Ailuropoda_melanoleuca
ENSEEUG00000000013	A1CF	97	67.467	ENSACIG00000008632	a1cf	78	68.211	Amphilophus_citrinellus
ENSEEUG00000000013	A1CF	97	67.105	ENSAOCG00000023744	a1cf	76	73.358	Amphiprion_ocellaris
ENSEEUG00000000013	A1CF	97	65.948	ENSAPEG00000009537	a1cf	80	66.250	Amphiprion_percula
ENSEEUG00000000013	A1CF	97	68.192	ENSATEG00000013720	a1cf	79	68.697	Anabas_testudineus
ENSEEUG00000000013	A1CF	100	76.660	ENSAPLG00000002964	A1CF	78	76.660	Anas_platyrhynchos
ENSEEUG00000000013	A1CF	98	75.388	ENSACAG00000015269	A1CF	78	75.388	Anolis_carolinensis
ENSEEUG00000000013	A1CF	100	81.878	ENSANAG00000019974	A1CF	78	81.878	Aotus_nancymaae
ENSEEUG00000000013	A1CF	97	66.594	ENSACLG00000017428	a1cf	80	68.365	Astatotilapia_calliptera
ENSEEUG00000000013	A1CF	97	70.989	ENSAMXG00000018180	a1cf	82	69.392	Astyanax_mexicanus
ENSEEUG00000000013	A1CF	97	84.163	ENSBTAG00000021195	A1CF	85	83.007	Bos_taurus
ENSEEUG00000000013	A1CF	100	80.472	ENSCJAG00000005045	A1CF	78	80.472	Callithrix_jacchus
ENSEEUG00000000013	A1CF	96	81.250	ENSCAFG00000015581	A1CF	78	80.472	Canis_familiaris
ENSEEUG00000000013	A1CF	96	81.250	ENSCAFG00020026421	A1CF	98	85.185	Canis_lupus_dingo
ENSEEUG00000000013	A1CF	97	81.778	ENSCHIG00000020411	A1CF	78	80.728	Capra_hircus
ENSEEUG00000000013	A1CF	96	82.688	ENSTSYG00000001755	A1CF	83	81.659	Carlito_syrichta
ENSEEUG00000000013	A1CF	85	81.818	ENSCAPG00000017386	A1CF	79	80.567	Cavia_aperea
ENSEEUG00000000013	A1CF	100	79.828	ENSCPOG00000009807	A1CF	78	79.828	Cavia_porcellus
ENSEEUG00000000013	A1CF	100	80.687	ENSCCAG00000018168	A1CF	78	80.687	Cebus_capucinus
ENSEEUG00000000013	A1CF	99	79.574	ENSCATG00000043715	A1CF	82	80.043	Cercocebus_atys
ENSEEUG00000000013	A1CF	99	77.801	ENSCLAG00000010424	A1CF	79	80.342	Chinchilla_lanigera
ENSEEUG00000000013	A1CF	99	78.661	ENSCSAG00000007032	A1CF	78	80.472	Chlorocebus_sabaeus
ENSEEUG00000000013	A1CF	97	82.805	ENSCHOG00000009089	A1CF	78	81.345	Choloepus_hoffmanni
ENSEEUG00000000013	A1CF	100	75.803	ENSCPBG00000026464	A1CF	78	75.803	Chrysemys_picta_bellii
ENSEEUG00000000013	A1CF	99	78.661	ENSCANG00000038032	A1CF	78	80.472	Colobus_angolensis_palliatus
ENSEEUG00000000013	A1CF	97	80.889	ENSCGRG00001017413	A1cf	78	79.657	Cricetulus_griseus_chok1gshd
ENSEEUG00000000013	A1CF	96	80.846	ENSCGRG00000017332	A1cf	78	79.654	Cricetulus_griseus_crigri
ENSEEUG00000000013	A1CF	97	66.225	ENSCSEG00000002361	a1cf	78	66.454	Cynoglossus_semilaevis
ENSEEUG00000000013	A1CF	97	66.812	ENSCVAG00000010520	a1cf	79	67.647	Cyprinodon_variegatus
ENSEEUG00000000013	A1CF	97	70.312	ENSDARG00000002968	a1cf	79	71.552	Danio_rerio
ENSEEUG00000000013	A1CF	97	80.889	ENSDNOG00000002829	A1CF	79	79.657	Dasypus_novemcinctus
ENSEEUG00000000013	A1CF	73	98.315	ENSETEG00000012527	A1CF	56	98.315	Echinops_telfairi
ENSEEUG00000000013	A1CF	97	82.889	ENSEASG00005012924	A1CF	81	82.090	Equus_asinus_asinus
ENSEEUG00000000013	A1CF	97	82.444	ENSECAG00000010424	A1CF	79	81.663	Equus_caballus
ENSEEUG00000000013	A1CF	97	68.627	ENSELUG00000003159	a1cf	81	68.487	Esox_lucius
ENSEEUG00000000013	A1CF	97	81.448	ENSFCAG00000011179	A1CF	78	81.004	Felis_catus
ENSEEUG00000000013	A1CF	100	76.906	ENSFALG00000013183	A1CF	78	76.906	Ficedula_albicollis
ENSEEUG00000000013	A1CF	99	78.436	ENSFDAG00000019371	A1CF	78	80.828	Fukomys_damarensis
ENSEEUG00000000013	A1CF	97	67.249	ENSFHEG00000019652	a1cf	82	68.067	Fundulus_heteroclitus
ENSEEUG00000000013	A1CF	100	62.815	ENSGMOG00000018943	a1cf	81	62.815	Gadus_morhua
ENSEEUG00000000013	A1CF	100	76.017	ENSGALG00000003765	A1CF	80	76.017	Gallus_gallus
ENSEEUG00000000013	A1CF	97	64.758	ENSGAFG00000014868	a1cf	77	64.968	Gambusia_affinis
ENSEEUG00000000013	A1CF	96	65.939	ENSGACG00000010241	a1cf	80	65.199	Gasterosteus_aculeatus
ENSEEUG00000000013	A1CF	100	76.445	ENSGAGG00000016508	A1CF	80	76.445	Gopherus_agassizii
ENSEEUG00000000013	A1CF	100	80.043	ENSGGOG00000009670	A1CF	78	80.043	Gorilla_gorilla
ENSEEUG00000000013	A1CF	97	66.376	ENSHBUG00000021959	a1cf	78	68.000	Haplochromis_burtoni
ENSEEUG00000000013	A1CF	99	77.131	ENSHGLG00000008955	A1CF	78	79.872	Heterocephalus_glaber_female
ENSEEUG00000000013	A1CF	99	77.755	ENSHGLG00100000518	A1CF	78	80.514	Heterocephalus_glaber_male
ENSEEUG00000000013	A1CF	100	61.570	ENSHCOG00000017669	a1cf	79	63.636	Hippocampus_comes
ENSEEUG00000000013	A1CF	97	70.524	ENSIPUG00000010367	a1cf	84	69.574	Ictalurus_punctatus
ENSEEUG00000000013	A1CF	97	67.457	ENSKMAG00000006568	a1cf	78	67.573	Kryptolebias_marmoratus
ENSEEUG00000000013	A1CF	96	64.819	ENSLBEG00000020994	a1cf	78	65.839	Labrus_bergylta
ENSEEUG00000000013	A1CF	98	74.279	ENSLACG00000008061	A1CF	77	74.279	Latimeria_chalumnae
ENSEEUG00000000013	A1CF	97	72.308	ENSLOCG00000006302	a1cf	78	71.550	Lepisosteus_oculatus
ENSEEUG00000000013	A1CF	98	81.140	ENSLAFG00000015462	A1CF	78	80.514	Loxodonta_africana
ENSEEUG00000000013	A1CF	99	80.000	ENSMFAG00000035948	A1CF	82	80.472	Macaca_fascicularis
ENSEEUG00000000013	A1CF	99	80.000	ENSMMUG00000007077	A1CF	78	81.878	Macaca_mulatta
ENSEEUG00000000013	A1CF	99	79.787	ENSMNEG00000031454	A1CF	82	80.258	Macaca_nemestrina
ENSEEUG00000000013	A1CF	97	81.195	ENSMLEG00000037223	A1CF	82	80.043	Mandrillus_leucophaeus
ENSEEUG00000000013	A1CF	97	64.396	ENSMAMG00000010402	a1cf	78	65.678	Mastacembelus_armatus
ENSEEUG00000000013	A1CF	97	67.181	ENSMZEG00005013245	a1cf	76	68.502	Maylandia_zebra
ENSEEUG00000000013	A1CF	100	76.068	ENSMGAG00000001507	A1CF	78	76.068	Meleagris_gallopavo
ENSEEUG00000000013	A1CF	99	76.605	ENSMAUG00000007422	A1cf	78	78.801	Mesocricetus_auratus
ENSEEUG00000000013	A1CF	96	82.086	ENSMICG00000003377	A1CF	78	80.303	Microcebus_murinus
ENSEEUG00000000013	A1CF	97	80.310	ENSMOCG00000021536	A1cf	78	79.443	Microtus_ochrogaster
ENSEEUG00000000013	A1CF	99	62.955	ENSMMOG00000009422	a1cf	82	64.240	Mola_mola
ENSEEUG00000000013	A1CF	97	79.148	ENSMODG00000016478	A1CF	85	78.431	Monodelphis_domestica
ENSEEUG00000000013	A1CF	99	63.816	ENSMALG00000012992	a1cf	79	63.816	Monopterus_albus
ENSEEUG00000000013	A1CF	97	80.856	MGP_CAROLIEiJ_G0022873	A1cf	78	79.739	Mus_caroli
ENSEEUG00000000013	A1CF	97	80.856	ENSMUSG00000052595	A1cf	99	83.838	Mus_musculus
ENSEEUG00000000013	A1CF	100	79.521	MGP_PahariEiJ_G0014366	A1cf	78	79.521	Mus_pahari
ENSEEUG00000000013	A1CF	97	80.856	MGP_SPRETEiJ_G0023792	A1cf	78	79.739	Mus_spretus
ENSEEUG00000000013	A1CF	96	72.294	ENSMPUG00000016971	A1CF	76	74.444	Mustela_putorius_furo
ENSEEUG00000000013	A1CF	97	81.333	ENSMLUG00000016071	A1CF	78	80.728	Myotis_lucifugus
ENSEEUG00000000013	A1CF	97	80.310	ENSNGAG00000015136	A1cf	78	79.229	Nannospalax_galili
ENSEEUG00000000013	A1CF	97	66.594	ENSNBRG00000001712	a1cf	78	68.211	Neolamprologus_brichardi
ENSEEUG00000000013	A1CF	97	81.858	ENSNLEG00000012028	A1CF	81	78.914	Nomascus_leucogenys
ENSEEUG00000000013	A1CF	97	79.821	ENSMEUG00000015909	A1CF	83	78.649	Notamacropus_eugenii
ENSEEUG00000000013	A1CF	77	94.309	ENSOPRG00000010667	A1CF	69	94.309	Ochotona_princeps
ENSEEUG00000000013	A1CF	97	67.467	ENSONIG00000019105	a1cf	78	68.000	Oreochromis_niloticus
ENSEEUG00000000013	A1CF	79	83.607	ENSOANG00000007360	A1CF	79	83.607	Ornithorhynchus_anatinus
ENSEEUG00000000013	A1CF	96	82.005	ENSOCUG00000011587	A1CF	78	80.435	Oryctolagus_cuniculus
ENSEEUG00000000013	A1CF	99	65.136	ENSORLG00000013342	a1cf	81	65.136	Oryzias_latipes
ENSEEUG00000000013	A1CF	100	65.696	ENSORLG00020000586	a1cf	79	65.696	Oryzias_latipes_hni
ENSEEUG00000000013	A1CF	100	65.696	ENSORLG00015018569	a1cf	79	65.696	Oryzias_latipes_hsok
ENSEEUG00000000013	A1CF	100	68.076	ENSOMEG00000013531	a1cf	78	68.076	Oryzias_melastigma
ENSEEUG00000000013	A1CF	96	80.537	ENSOGAG00000012884	A1CF	78	79.399	Otolemur_garnettii
ENSEEUG00000000013	A1CF	97	82.000	ENSOARG00000013695	A1CF	78	80.942	Ovis_aries
ENSEEUG00000000013	A1CF	100	80.043	ENSPPAG00000028115	A1CF	84	80.529	Pan_paniscus
ENSEEUG00000000013	A1CF	97	80.444	ENSPPRG00000012180	A1CF	78	80.043	Panthera_pardus
ENSEEUG00000000013	A1CF	97	80.444	ENSPTIG00000021223	A1CF	78	80.043	Panthera_tigris_altaica
ENSEEUG00000000013	A1CF	100	81.223	ENSPTRG00000002508	A1CF	80	79.828	Pan_troglodytes
ENSEEUG00000000013	A1CF	99	80.000	ENSPANG00000021988	A1CF	82	80.472	Papio_anubis
ENSEEUG00000000013	A1CF	100	70.339	ENSPKIG00000025176	a1cf	79	70.339	Paramormyrops_kingsleyae
ENSEEUG00000000013	A1CF	100	77.996	ENSPSIG00000010318	A1CF	78	77.996	Pelodiscus_sinensis
ENSEEUG00000000013	A1CF	96	60.820	ENSPMGG00000013359	a1cf	76	62.500	Periophthalmus_magnuspinnatus
ENSEEUG00000000013	A1CF	100	78.587	ENSPEMG00000015021	A1cf	78	78.587	Peromyscus_maniculatus_bairdii
ENSEEUG00000000013	A1CF	97	79.148	ENSPCIG00000002175	A1CF	78	77.996	Phascolarctos_cinereus
ENSEEUG00000000013	A1CF	97	65.236	ENSPFOG00000007437	-	79	66.116	Poecilia_formosa
ENSEEUG00000000013	A1CF	97	65.451	ENSPFOG00000006683	a1cf	79	66.322	Poecilia_formosa
ENSEEUG00000000013	A1CF	97	66.376	ENSPLAG00000000026	a1cf	79	67.227	Poecilia_latipinna
ENSEEUG00000000013	A1CF	97	66.376	ENSPLAG00000001210	-	79	67.227	Poecilia_latipinna
ENSEEUG00000000013	A1CF	97	61.853	ENSPMEG00000015529	-	77	62.863	Poecilia_mexicana
ENSEEUG00000000013	A1CF	97	62.939	ENSPMEG00000000921	a1cf	77	63.924	Poecilia_mexicana
ENSEEUG00000000013	A1CF	97	65.310	ENSPREG00000016298	a1cf	79	66.116	Poecilia_reticulata
ENSEEUG00000000013	A1CF	97	83.333	ENSPPYG00000002819	A1CF	78	82.353	Pongo_abelii
ENSEEUG00000000013	A1CF	99	77.178	ENSPCOG00000024172	A1CF	79	79.487	Propithecus_coquereli
ENSEEUG00000000013	A1CF	97	65.451	ENSPNYG00000017944	a1cf	79	67.081	Pundamilia_nyererei
ENSEEUG00000000013	A1CF	97	72.667	ENSPNAG00000007704	a1cf	79	71.581	Pygocentrus_nattereri
ENSEEUG00000000013	A1CF	97	80.856	ENSRNOG00000033195	A1cf	78	79.739	Rattus_norvegicus
ENSEEUG00000000013	A1CF	98	78.448	ENSRBIG00000042892	A1CF	90	80.310	Rhinopithecus_bieti
ENSEEUG00000000013	A1CF	99	80.000	ENSRROG00000041398	A1CF	82	81.878	Rhinopithecus_roxellana
ENSEEUG00000000013	A1CF	98	81.538	ENSSBOG00000021930	A1CF	90	81.898	Saimiri_boliviensis_boliviensis
ENSEEUG00000000013	A1CF	97	78.475	ENSSHAG00000005096	A1CF	78	77.560	Sarcophilus_harrisii
ENSEEUG00000000013	A1CF	78	91.339	ENSSFOG00015011774	a1cf	71	91.339	Scleropages_formosus
ENSEEUG00000000013	A1CF	97	65.665	ENSSMAG00000013271	a1cf	79	65.083	Scophthalmus_maximus
ENSEEUG00000000013	A1CF	97	66.374	ENSSDUG00000013930	a1cf	79	66.808	Seriola_dumerili
ENSEEUG00000000013	A1CF	97	60.444	ENSSLDG00000004290	a1cf	78	60.897	Seriola_lalandi_dorsalis
ENSEEUG00000000013	A1CF	77	100.000	ENSSARG00000005940	A1CF	64	100.000	Sorex_araneus
ENSEEUG00000000013	A1CF	98	76.805	ENSSPUG00000006797	A1CF	77	76.805	Sphenodon_punctatus
ENSEEUG00000000013	A1CF	97	83.111	ENSSSCG00000010431	A1CF	78	82.013	Sus_scrofa
ENSEEUG00000000013	A1CF	100	76.231	ENSTGUG00000005090	A1CF	77	76.231	Taeniopygia_guttata
ENSEEUG00000000013	A1CF	100	64.803	ENSTRUG00000001982	a1cf	79	64.803	Takifugu_rubripes
ENSEEUG00000000013	A1CF	97	65.812	ENSTNIG00000003580	a1cf	79	64.948	Tetraodon_nigroviridis
ENSEEUG00000000013	A1CF	97	78.281	ENSTTRG00000013190	A1CF	77	77.342	Tursiops_truncatus
ENSEEUG00000000013	A1CF	97	83.032	ENSUAMG00000020065	A1CF	78	81.878	Ursus_americanus
ENSEEUG00000000013	A1CF	97	81.333	ENSUMAG00000011162	A1CF	81	80.043	Ursus_maritimus
ENSEEUG00000000013	A1CF	97	81.839	ENSVPAG00000006130	A1CF	75	81.839	Vicugna_pacos
ENSEEUG00000000013	A1CF	97	82.579	ENSVVUG00000002504	A1CF	84	81.659	Vulpes_vulpes
ENSEEUG00000000013	A1CF	99	70.851	ENSXETG00000006611	a1cf	80	70.851	Xenopus_tropicalis
ENSEEUG00000000013	A1CF	97	68.062	ENSXCOG00000003302	a1cf	78	68.220	Xiphophorus_couchianus
ENSEEUG00000000013	A1CF	97	66.883	ENSXMAG00000016703	a1cf	79	67.083	Xiphophorus_maculatus