EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000000180 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 94348 bases
Position: chrGeneScaffold_1454:15957-110304
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000000155	PRP1_N	PF06424.12	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000000180	PRPF6-201	2817	-	ENSEEUP00000000155	938 (aa)	-	UPI0000F637BB

Gene Model

Click here to download ENSEEUG00000000180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000000180's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000000180	PRPF6	81	100.000	ENSG00000101161	PRPF6	90	100.000	Homo_sapiens
ENSEEUG00000000180	PRPF6	81	95.833	ENSAPOG00000010395	prpf6	86	95.833	Acanthochromis_polyacanthus
ENSEEUG00000000180	PRPF6	79	96.767	ENSAMEG00000001916	PRPF6	86	96.767	Ailuropoda_melanoleuca
ENSEEUG00000000180	PRPF6	81	95.833	ENSACIG00000019862	prpf6	86	95.833	Amphilophus_citrinellus
ENSEEUG00000000180	PRPF6	81	95.833	ENSAOCG00000012988	prpf6	86	95.833	Amphiprion_ocellaris
ENSEEUG00000000180	PRPF6	81	95.833	ENSAPEG00000008301	prpf6	89	95.833	Amphiprion_percula
ENSEEUG00000000180	PRPF6	81	95.833	ENSATEG00000005581	prpf6	86	95.833	Anabas_testudineus
ENSEEUG00000000180	PRPF6	81	95.833	ENSACAG00000006464	PRPF6	86	95.833	Anolis_carolinensis
ENSEEUG00000000180	PRPF6	81	100.000	ENSANAG00000012661	PRPF6	90	100.000	Aotus_nancymaae
ENSEEUG00000000180	PRPF6	81	95.833	ENSACLG00000025875	prpf6	86	95.833	Astatotilapia_calliptera
ENSEEUG00000000180	PRPF6	81	100.000	ENSAMXG00000001929	prpf6	86	100.000	Astyanax_mexicanus
ENSEEUG00000000180	PRPF6	82	100.000	ENSBTAG00000011656	PRPF6	90	100.000	Bos_taurus
ENSEEUG00000000180	PRPF6	81	100.000	ENSCJAG00000010616	PRPF6	90	100.000	Callithrix_jacchus
ENSEEUG00000000180	PRPF6	82	100.000	ENSCAFG00000013165	PRPF6	90	100.000	Canis_familiaris
ENSEEUG00000000180	PRPF6	82	100.000	ENSCAFG00020002050	PRPF6	90	100.000	Canis_lupus_dingo
ENSEEUG00000000180	PRPF6	82	100.000	ENSCHIG00000018187	PRPF6	90	100.000	Capra_hircus
ENSEEUG00000000180	PRPF6	82	100.000	ENSTSYG00000007814	PRPF6	90	100.000	Carlito_syrichta
ENSEEUG00000000180	PRPF6	79	94.688	ENSCAPG00000015077	PRPF6	90	94.688	Cavia_aperea
ENSEEUG00000000180	PRPF6	82	100.000	ENSCPOG00000007518	PRPF6	90	100.000	Cavia_porcellus
ENSEEUG00000000180	PRPF6	81	100.000	ENSCCAG00000024564	PRPF6	90	100.000	Cebus_capucinus
ENSEEUG00000000180	PRPF6	81	100.000	ENSCATG00000037473	PRPF6	90	100.000	Cercocebus_atys
ENSEEUG00000000180	PRPF6	79	100.000	ENSCLAG00000003854	PRPF6	90	100.000	Chinchilla_lanigera
ENSEEUG00000000180	PRPF6	81	100.000	ENSCSAG00000016742	PRPF6	90	100.000	Chlorocebus_sabaeus
ENSEEUG00000000180	PRPF6	65	100.000	ENSCHOG00000003315	-	91	100.000	Choloepus_hoffmanni
ENSEEUG00000000180	PRPF6	81	100.000	ENSCPBG00000013964	PRPF6	86	100.000	Chrysemys_picta_bellii
ENSEEUG00000000180	PRPF6	72	82.051	ENSCING00000008817	-	87	82.051	Ciona_intestinalis
ENSEEUG00000000180	PRPF6	81	100.000	ENSCANG00000038230	PRPF6	90	100.000	Colobus_angolensis_palliatus
ENSEEUG00000000180	PRPF6	82	100.000	ENSCGRG00001022666	Prpf6	90	100.000	Cricetulus_griseus_chok1gshd
ENSEEUG00000000180	PRPF6	75	95.833	ENSCSEG00000018561	prpf6	90	95.833	Cynoglossus_semilaevis
ENSEEUG00000000180	PRPF6	81	95.833	ENSCVAG00000010550	prpf6	86	95.833	Cyprinodon_variegatus
ENSEEUG00000000180	PRPF6	81	95.833	ENSDARG00000091367	prpf6	89	95.833	Danio_rerio
ENSEEUG00000000180	PRPF6	81	100.000	ENSDNOG00000040544	PRPF6	90	100.000	Dasypus_novemcinctus
ENSEEUG00000000180	PRPF6	78	93.995	ENSDORG00000005406	Prpf6	96	93.995	Dipodomys_ordii
ENSEEUG00000000180	PRPF6	79	69.718	FBgn0036828	CG6841	86	69.718	Drosophila_melanogaster
ENSEEUG00000000180	PRPF6	67	100.000	ENSETEG00000004447	PRPF6	75	100.000	Echinops_telfairi
ENSEEUG00000000180	PRPF6	78	83.372	ENSEBUG00000008835	prpf6	90	91.304	Eptatretus_burgeri
ENSEEUG00000000180	PRPF6	82	100.000	ENSEASG00005023115	PRPF6	90	100.000	Equus_asinus_asinus
ENSEEUG00000000180	PRPF6	81	100.000	ENSECAG00000013983	PRPF6	89	100.000	Equus_caballus
ENSEEUG00000000180	PRPF6	81	91.667	ENSELUG00000001945	prpf6	84	91.667	Esox_lucius
ENSEEUG00000000180	PRPF6	82	100.000	ENSFCAG00000001183	PRPF6	90	100.000	Felis_catus
ENSEEUG00000000180	PRPF6	81	100.000	ENSFALG00000010326	-	87	100.000	Ficedula_albicollis
ENSEEUG00000000180	PRPF6	78	88.453	ENSFALG00000006046	-	87	88.453	Ficedula_albicollis
ENSEEUG00000000180	PRPF6	79	95.843	ENSFDAG00000006451	PRPF6	93	95.843	Fukomys_damarensis
ENSEEUG00000000180	PRPF6	81	95.833	ENSFHEG00000000560	prpf6	86	95.833	Fundulus_heteroclitus
ENSEEUG00000000180	PRPF6	81	95.833	ENSGMOG00000015622	prpf6	89	95.833	Gadus_morhua
ENSEEUG00000000180	PRPF6	81	100.000	ENSGALG00000006001	PRPF6	90	100.000	Gallus_gallus
ENSEEUG00000000180	PRPF6	81	95.833	ENSGAFG00000021109	prpf6	86	95.833	Gambusia_affinis
ENSEEUG00000000180	PRPF6	81	95.833	ENSGACG00000002576	prpf6	89	95.833	Gasterosteus_aculeatus
ENSEEUG00000000180	PRPF6	81	100.000	ENSGAGG00000008653	PRPF6	86	100.000	Gopherus_agassizii
ENSEEUG00000000180	PRPF6	81	100.000	ENSGGOG00000016876	PRPF6	90	100.000	Gorilla_gorilla
ENSEEUG00000000180	PRPF6	81	95.833	ENSHBUG00000004496	prpf6	86	95.833	Haplochromis_burtoni
ENSEEUG00000000180	PRPF6	82	100.000	ENSHGLG00000009222	PRPF6	90	100.000	Heterocephalus_glaber_female
ENSEEUG00000000180	PRPF6	79	95.612	ENSHGLG00100016600	PRPF6	90	95.612	Heterocephalus_glaber_male
ENSEEUG00000000180	PRPF6	81	95.833	ENSHCOG00000011513	prpf6	86	95.833	Hippocampus_comes
ENSEEUG00000000180	PRPF6	81	95.833	ENSIPUG00000004912	prpf6	86	95.833	Ictalurus_punctatus
ENSEEUG00000000180	PRPF6	80	100.000	ENSSTOG00000002922	PRPF6	90	100.000	Ictidomys_tridecemlineatus
ENSEEUG00000000180	PRPF6	82	100.000	ENSJJAG00000000836	Prpf6	90	100.000	Jaculus_jaculus
ENSEEUG00000000180	PRPF6	81	95.833	ENSKMAG00000017800	prpf6	86	95.833	Kryptolebias_marmoratus
ENSEEUG00000000180	PRPF6	81	95.833	ENSLBEG00000012582	prpf6	86	95.833	Labrus_bergylta
ENSEEUG00000000180	PRPF6	81	95.833	ENSLOCG00000004827	prpf6	86	95.833	Lepisosteus_oculatus
ENSEEUG00000000180	PRPF6	81	100.000	ENSLAFG00000005272	PRPF6	90	100.000	Loxodonta_africana
ENSEEUG00000000180	PRPF6	81	100.000	ENSMFAG00000037542	PRPF6	90	100.000	Macaca_fascicularis
ENSEEUG00000000180	PRPF6	81	100.000	ENSMMUG00000015558	PRPF6	89	100.000	Macaca_mulatta
ENSEEUG00000000180	PRPF6	81	100.000	ENSMNEG00000045555	PRPF6	88	100.000	Macaca_nemestrina
ENSEEUG00000000180	PRPF6	81	95.833	ENSMAMG00000010718	prpf6	86	95.833	Mastacembelus_armatus
ENSEEUG00000000180	PRPF6	78	88.684	ENSMZEG00005026539	prpf6	93	88.684	Maylandia_zebra
ENSEEUG00000000180	PRPF6	81	95.833	ENSMZEG00005015261	-	89	95.833	Maylandia_zebra
ENSEEUG00000000180	PRPF6	78	94.457	ENSMGAG00000006634	PRPF6	90	94.457	Meleagris_gallopavo
ENSEEUG00000000180	PRPF6	82	100.000	ENSMAUG00000013969	Prpf6	90	100.000	Mesocricetus_auratus
ENSEEUG00000000180	PRPF6	79	95.381	ENSMICG00000017793	PRPF6	99	95.381	Microcebus_murinus
ENSEEUG00000000180	PRPF6	82	100.000	ENSMOCG00000001701	Prpf6	90	100.000	Microtus_ochrogaster
ENSEEUG00000000180	PRPF6	81	95.833	ENSMMOG00000020419	prpf6	90	95.833	Mola_mola
ENSEEUG00000000180	PRPF6	80	100.000	ENSMODG00000017051	PRPF6	88	100.000	Monodelphis_domestica
ENSEEUG00000000180	PRPF6	78	88.453	ENSMALG00000000089	prpf6	88	88.453	Monopterus_albus
ENSEEUG00000000180	PRPF6	81	100.000	MGP_CAROLIEiJ_G0024814	Prpf6	90	100.000	Mus_caroli
ENSEEUG00000000180	PRPF6	82	100.000	ENSMUSG00000002455	Prpf6	90	100.000	Mus_musculus
ENSEEUG00000000180	PRPF6	82	100.000	MGP_PahariEiJ_G0026262	Prpf6	90	100.000	Mus_pahari
ENSEEUG00000000180	PRPF6	82	100.000	MGP_SPRETEiJ_G0025741	Prpf6	90	100.000	Mus_spretus
ENSEEUG00000000180	PRPF6	78	94.872	ENSMPUG00000008673	PRPF6	92	94.872	Mustela_putorius_furo
ENSEEUG00000000180	PRPF6	82	100.000	ENSNGAG00000003365	Prpf6	90	100.000	Nannospalax_galili
ENSEEUG00000000180	PRPF6	81	95.833	ENSNBRG00000015025	prpf6	86	95.833	Neolamprologus_brichardi
ENSEEUG00000000180	PRPF6	81	100.000	ENSNLEG00000010208	PRPF6	90	100.000	Nomascus_leucogenys
ENSEEUG00000000180	PRPF6	68	100.000	ENSMEUG00000009824	-	68	100.000	Notamacropus_eugenii
ENSEEUG00000000180	PRPF6	81	100.000	ENSODEG00000004841	PRPF6	90	100.000	Octodon_degus
ENSEEUG00000000180	PRPF6	81	95.833	ENSONIG00000017406	prpf6	86	95.833	Oreochromis_niloticus
ENSEEUG00000000180	PRPF6	81	100.000	ENSOANG00000004920	PRPF6	90	100.000	Ornithorhynchus_anatinus
ENSEEUG00000000180	PRPF6	78	94.919	ENSOCUG00000014151	PRPF6	88	94.919	Oryctolagus_cuniculus
ENSEEUG00000000180	PRPF6	81	95.833	ENSORLG00000009592	prpf6	86	95.833	Oryzias_latipes
ENSEEUG00000000180	PRPF6	81	95.833	ENSORLG00020001458	prpf6	86	95.833	Oryzias_latipes_hni
ENSEEUG00000000180	PRPF6	81	95.833	ENSORLG00015018762	prpf6	86	95.833	Oryzias_latipes_hsok
ENSEEUG00000000180	PRPF6	81	95.833	ENSOMEG00000012174	prpf6	86	95.833	Oryzias_melastigma
ENSEEUG00000000180	PRPF6	66	100.000	ENSOGAG00000007573	PRPF6	82	100.000	Otolemur_garnettii
ENSEEUG00000000180	PRPF6	79	95.843	ENSOARG00000008776	PRPF6	87	95.843	Ovis_aries
ENSEEUG00000000180	PRPF6	81	100.000	ENSPPAG00000008686	PRPF6	90	100.000	Pan_paniscus
ENSEEUG00000000180	PRPF6	82	100.000	ENSPPRG00000008497	PRPF6	90	100.000	Panthera_pardus
ENSEEUG00000000180	PRPF6	79	96.305	ENSPTIG00000011184	PRPF6	87	96.305	Panthera_tigris_altaica
ENSEEUG00000000180	PRPF6	81	100.000	ENSPTRG00000013765	PRPF6	90	100.000	Pan_troglodytes
ENSEEUG00000000180	PRPF6	81	100.000	ENSPANG00000024135	PRPF6	90	100.000	Papio_anubis
ENSEEUG00000000180	PRPF6	81	95.833	ENSPKIG00000005627	prpf6	89	95.833	Paramormyrops_kingsleyae
ENSEEUG00000000180	PRPF6	78	94.688	ENSPSIG00000007717	PRPF6	93	94.688	Pelodiscus_sinensis
ENSEEUG00000000180	PRPF6	81	91.667	ENSPMGG00000008925	prpf6	86	91.667	Periophthalmus_magnuspinnatus
ENSEEUG00000000180	PRPF6	82	100.000	ENSPEMG00000016036	Prpf6	90	100.000	Peromyscus_maniculatus_bairdii
ENSEEUG00000000180	PRPF6	81	90.909	ENSPMAG00000006144	prpf6	87	87.298	Petromyzon_marinus
ENSEEUG00000000180	PRPF6	81	100.000	ENSPCIG00000017909	PRPF6	90	100.000	Phascolarctos_cinereus
ENSEEUG00000000180	PRPF6	81	95.833	ENSPFOG00000006431	prpf6	86	95.833	Poecilia_formosa
ENSEEUG00000000180	PRPF6	81	95.833	ENSPLAG00000005974	prpf6	86	95.833	Poecilia_latipinna
ENSEEUG00000000180	PRPF6	81	95.833	ENSPMEG00000009977	prpf6	86	95.833	Poecilia_mexicana
ENSEEUG00000000180	PRPF6	81	95.833	ENSPREG00000017993	prpf6	82	95.833	Poecilia_reticulata
ENSEEUG00000000180	PRPF6	81	100.000	ENSPPYG00000011256	PRPF6	90	100.000	Pongo_abelii
ENSEEUG00000000180	PRPF6	77	96.460	ENSPCAG00000006536	PRPF6	76	96.460	Procavia_capensis
ENSEEUG00000000180	PRPF6	82	100.000	ENSPCOG00000016881	PRPF6	90	100.000	Propithecus_coquereli
ENSEEUG00000000180	PRPF6	79	100.000	ENSPVAG00000014316	PRPF6	87	100.000	Pteropus_vampyrus
ENSEEUG00000000180	PRPF6	67	95.833	ENSPNYG00000001939	prpf6	85	95.833	Pundamilia_nyererei
ENSEEUG00000000180	PRPF6	81	95.833	ENSPNAG00000015606	prpf6	86	95.833	Pygocentrus_nattereri
ENSEEUG00000000180	PRPF6	82	100.000	ENSRNOG00000051498	Prpf6	90	100.000	Rattus_norvegicus
ENSEEUG00000000180	PRPF6	81	100.000	ENSRBIG00000043613	PRPF6	90	100.000	Rhinopithecus_bieti
ENSEEUG00000000180	PRPF6	81	100.000	ENSRROG00000040969	PRPF6	90	100.000	Rhinopithecus_roxellana
ENSEEUG00000000180	PRPF6	76	80.488	ENSSBOG00000020632	PRPF6	90	76.948	Saimiri_boliviensis_boliviensis
ENSEEUG00000000180	PRPF6	81	100.000	ENSSHAG00000016810	PRPF6	90	100.000	Sarcophilus_harrisii
ENSEEUG00000000180	PRPF6	78	90.762	ENSSFOG00015020859	prpf6	88	90.762	Scleropages_formosus
ENSEEUG00000000180	PRPF6	81	95.833	ENSSMAG00000008112	prpf6	86	95.833	Scophthalmus_maximus
ENSEEUG00000000180	PRPF6	81	95.833	ENSSDUG00000016142	prpf6	86	95.833	Seriola_dumerili
ENSEEUG00000000180	PRPF6	81	95.833	ENSSLDG00000025283	prpf6	90	95.833	Seriola_lalandi_dorsalis
ENSEEUG00000000180	PRPF6	78	92.841	ENSSPUG00000018260	PRPF6	93	92.841	Sphenodon_punctatus
ENSEEUG00000000180	PRPF6	81	95.833	ENSSPAG00000015850	prpf6	86	95.833	Stegastes_partitus
ENSEEUG00000000180	PRPF6	81	100.000	ENSSSCG00000029119	PRPF6	93	95.612	Sus_scrofa
ENSEEUG00000000180	PRPF6	81	100.000	ENSTGUG00000007221	PRPF6	90	100.000	Taeniopygia_guttata
ENSEEUG00000000180	PRPF6	81	95.833	ENSTRUG00000002920	prpf6	86	95.833	Takifugu_rubripes
ENSEEUG00000000180	PRPF6	73	95.833	ENSTNIG00000017873	prpf6	82	95.833	Tetraodon_nigroviridis
ENSEEUG00000000180	PRPF6	54	97.333	ENSTBEG00000005348	PRPF6	62	96.471	Tupaia_belangeri
ENSEEUG00000000180	PRPF6	81	100.000	ENSTTRG00000013068	PRPF6	90	100.000	Tursiops_truncatus
ENSEEUG00000000180	PRPF6	79	96.709	ENSUMAG00000021631	PRPF6	87	96.709	Ursus_maritimus
ENSEEUG00000000180	PRPF6	82	100.000	ENSVVUG00000014948	PRPF6	90	100.000	Vulpes_vulpes
ENSEEUG00000000180	PRPF6	81	100.000	ENSXETG00000012054	prpf6	87	100.000	Xenopus_tropicalis
ENSEEUG00000000180	PRPF6	81	95.833	ENSXCOG00000008082	prpf6	86	95.833	Xiphophorus_couchianus
ENSEEUG00000000180	PRPF6	81	95.833	ENSXMAG00000015581	prpf6	86	95.833	Xiphophorus_maculatus