EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000000198 (Gene tree)
Gene ID: -
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 11863 bases
Position: chrscaffold_349124:72394-84256
Accession: 4237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000000171	zf-C2H2	PF00096.26	1.7e-28	1	6
ENSEEUP00000000171	zf-C2H2	PF00096.26	1.7e-28	2	6
ENSEEUP00000000171	zf-C2H2	PF00096.26	1.7e-28	3	6
ENSEEUP00000000171	zf-C2H2	PF00096.26	1.7e-28	4	6
ENSEEUP00000000171	zf-C2H2	PF00096.26	1.7e-28	5	6
ENSEEUP00000000171	zf-C2H2	PF00096.26	1.7e-28	6	6
ENSEEUP00000000171	zf-met	PF12874.7	7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000000198	GFI1-201	1248	-	ENSEEUP00000000171	415 (aa)	-	UPI0000F63235

Gene Model

Click here to download ENSEEUG00000000198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000000198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000000198	GFI1	50	42.045	ENSEEUG00000012650	ZNF81	73	42.045
ENSEEUG00000000198	GFI1	52	44.311	ENSEEUG00000008362	-	89	44.311
ENSEEUG00000000198	GFI1	52	37.415	ENSEEUG00000010943	-	73	37.415
ENSEEUG00000000198	GFI1	50	45.882	ENSEEUG00000006864	ZNF235	65	45.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000000198	GFI1	100	85.545	ENSG00000162676	GFI1	100	85.545	Homo_sapiens
ENSEEUG00000000198	GFI1	100	62.708	ENSAPOG00000015189	gfi1ab	100	62.470	Acanthochromis_polyacanthus
ENSEEUG00000000198	GFI1	100	62.530	ENSACIG00000016354	gfi1ab	100	61.098	Amphilophus_citrinellus
ENSEEUG00000000198	GFI1	100	54.087	ENSAOCG00000008339	gfi1ab	100	53.606	Amphiprion_ocellaris
ENSEEUG00000000198	GFI1	100	63.658	ENSAPEG00000023870	gfi1ab	100	63.183	Amphiprion_percula
ENSEEUG00000000198	GFI1	100	58.491	ENSATEG00000009167	gfi1ab	89	58.216	Anabas_testudineus
ENSEEUG00000000198	GFI1	87	71.117	ENSAPLG00000015700	GFI1	99	70.572	Anas_platyrhynchos
ENSEEUG00000000198	GFI1	100	69.555	ENSACAG00000004498	GFI1	100	68.998	Anolis_carolinensis
ENSEEUG00000000198	GFI1	100	83.886	ENSANAG00000019656	GFI1	100	83.886	Aotus_nancymaae
ENSEEUG00000000198	GFI1	100	63.420	ENSACLG00000026458	gfi1ab	93	62.233	Astatotilapia_calliptera
ENSEEUG00000000198	GFI1	75	60.577	ENSAMXG00000006669	GFI1	100	60.577	Astyanax_mexicanus
ENSEEUG00000000198	GFI1	100	60.140	ENSAMXG00000039600	gfi1ab	100	59.441	Astyanax_mexicanus
ENSEEUG00000000198	GFI1	100	85.476	ENSBTAG00000016723	GFI1	100	86.190	Bos_taurus
ENSEEUG00000000198	GFI1	100	84.123	ENSCJAG00000017609	GFI1	100	83.411	Callithrix_jacchus
ENSEEUG00000000198	GFI1	100	84.597	ENSCAFG00000020155	GFI1	100	85.308	Canis_familiaris
ENSEEUG00000000198	GFI1	100	84.597	ENSCAFG00020013371	GFI1	88	85.308	Canis_lupus_dingo
ENSEEUG00000000198	GFI1	100	85.952	ENSCHIG00000016135	GFI1	100	85.952	Capra_hircus
ENSEEUG00000000198	GFI1	100	84.286	ENSCPOG00000011727	GFI1	100	84.048	Cavia_porcellus
ENSEEUG00000000198	GFI1	100	83.529	ENSCCAG00000036072	GFI1	100	84.597	Cebus_capucinus
ENSEEUG00000000198	GFI1	100	85.071	ENSCATG00000037873	GFI1	100	85.071	Cercocebus_atys
ENSEEUG00000000198	GFI1	100	81.775	ENSCLAG00000005915	GFI1	100	79.446	Chinchilla_lanigera
ENSEEUG00000000198	GFI1	86	82.418	ENSCSAG00000001469	GFI1	100	82.418	Chlorocebus_sabaeus
ENSEEUG00000000198	GFI1	100	85.071	ENSCANG00000034077	GFI1	100	85.071	Colobus_angolensis_palliatus
ENSEEUG00000000198	GFI1	100	79.384	ENSCGRG00001015432	Gfi1	100	79.147	Cricetulus_griseus_chok1gshd
ENSEEUG00000000198	GFI1	100	57.576	ENSCSEG00000017729	GFI1	100	57.576	Cynoglossus_semilaevis
ENSEEUG00000000198	GFI1	100	61.085	ENSCVAG00000011828	gfi1ab	100	60.613	Cyprinodon_variegatus
ENSEEUG00000000198	GFI1	100	59.145	ENSCVAG00000004930	GFI1	100	59.620	Cyprinodon_variegatus
ENSEEUG00000000198	GFI1	100	63.679	ENSDARG00000044457	gfi1ab	100	63.208	Danio_rerio
ENSEEUG00000000198	GFI1	100	84.634	ENSDNOG00000000782	GFI1	97	84.186	Dasypus_novemcinctus
ENSEEUG00000000198	GFI1	100	83.432	ENSEBUG00000008075	gfi1ab	57	83.432	Eptatretus_burgeri
ENSEEUG00000000198	GFI1	100	85.203	ENSEASG00005015509	GFI1	86	85.203	Equus_asinus_asinus
ENSEEUG00000000198	GFI1	92	78.701	ENSECAG00000006647	GFI1	92	78.701	Equus_caballus
ENSEEUG00000000198	GFI1	100	63.615	ENSELUG00000003015	gfi1ab	99	63.146	Esox_lucius
ENSEEUG00000000198	GFI1	100	57.381	ENSELUG00000019033	GFI1	100	57.346	Esox_lucius
ENSEEUG00000000198	GFI1	100	85.308	ENSFCAG00000005914	GFI1	100	85.782	Felis_catus
ENSEEUG00000000198	GFI1	100	61.466	ENSFHEG00000010997	gfi1ab	100	61.229	Fundulus_heteroclitus
ENSEEUG00000000198	GFI1	100	57.809	ENSFHEG00000000341	GFI1	100	60.142	Fundulus_heteroclitus
ENSEEUG00000000198	GFI1	100	61.667	ENSGMOG00000007737	gfi1ab	100	60.930	Gadus_morhua
ENSEEUG00000000198	GFI1	100	69.953	ENSGALG00000043650	GFI1	100	69.953	Gallus_gallus
ENSEEUG00000000198	GFI1	100	60.798	ENSGAFG00000016637	gfi1ab	100	60.563	Gambusia_affinis
ENSEEUG00000000198	GFI1	100	58.548	ENSGAFG00000018063	GFI1	100	59.813	Gambusia_affinis
ENSEEUG00000000198	GFI1	100	63.007	ENSGACG00000004257	gfi1ab	97	62.708	Gasterosteus_aculeatus
ENSEEUG00000000198	GFI1	100	85.545	ENSGGOG00000005320	GFI1	100	85.545	Gorilla_gorilla
ENSEEUG00000000198	GFI1	100	62.919	ENSHBUG00000011969	gfi1ab	100	61.429	Haplochromis_burtoni
ENSEEUG00000000198	GFI1	100	84.524	ENSHGLG00000008020	GFI1	100	84.286	Heterocephalus_glaber_female
ENSEEUG00000000198	GFI1	100	84.524	ENSHGLG00100000610	GFI1	100	84.286	Heterocephalus_glaber_male
ENSEEUG00000000198	GFI1	100	53.047	ENSHCOG00000008590	gfi1ab	100	51.693	Hippocampus_comes
ENSEEUG00000000198	GFI1	100	56.501	ENSHCOG00000019555	GFI1	100	56.802	Hippocampus_comes
ENSEEUG00000000198	GFI1	100	60.047	ENSIPUG00000010071	gfi1ab	87	59.811	Ictalurus_punctatus
ENSEEUG00000000198	GFI1	100	57.995	ENSIPUG00000013414	GFI1	100	57.995	Ictalurus_punctatus
ENSEEUG00000000198	GFI1	100	83.886	ENSSTOG00000014583	GFI1	100	84.597	Ictidomys_tridecemlineatus
ENSEEUG00000000198	GFI1	100	62.619	ENSKMAG00000003810	gfi1ab	100	62.381	Kryptolebias_marmoratus
ENSEEUG00000000198	GFI1	100	62.763	ENSLBEG00000027776	gfi1ab	100	63.232	Labrus_bergylta
ENSEEUG00000000198	GFI1	99	77.222	ENSLACG00000017590	-	55	77.222	Latimeria_chalumnae
ENSEEUG00000000198	GFI1	100	68.779	ENSLACG00000013362	GFI1	98	68.545	Latimeria_chalumnae
ENSEEUG00000000198	GFI1	100	65.493	ENSLOCG00000004711	gfi1ab	100	64.554	Lepisosteus_oculatus
ENSEEUG00000000198	GFI1	100	79.426	ENSLAFG00000018346	GFI1	100	79.665	Loxodonta_africana
ENSEEUG00000000198	GFI1	100	85.071	ENSMFAG00000045801	GFI1	100	85.071	Macaca_fascicularis
ENSEEUG00000000198	GFI1	100	85.071	ENSMNEG00000036338	GFI1	100	85.071	Macaca_nemestrina
ENSEEUG00000000198	GFI1	100	85.071	ENSMLEG00000036181	GFI1	100	85.071	Mandrillus_leucophaeus
ENSEEUG00000000198	GFI1	100	63.270	ENSMAMG00000008125	gfi1ab	100	62.796	Mastacembelus_armatus
ENSEEUG00000000198	GFI1	100	63.658	ENSMZEG00005009895	gfi1ab	100	62.470	Maylandia_zebra
ENSEEUG00000000198	GFI1	87	71.858	ENSMGAG00000008187	GFI1	99	72.131	Meleagris_gallopavo
ENSEEUG00000000198	GFI1	100	85.308	ENSMICG00000047208	GFI1	100	85.308	Microcebus_murinus
ENSEEUG00000000198	GFI1	100	59.091	ENSMMOG00000005556	gfi1ab	100	58.711	Mola_mola
ENSEEUG00000000198	GFI1	100	76.566	ENSMODG00000011802	GFI1	100	77.752	Monodelphis_domestica
ENSEEUG00000000198	GFI1	100	61.758	ENSMALG00000014672	gfi1ab	100	61.283	Monopterus_albus
ENSEEUG00000000198	GFI1	100	80.142	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSEEUG00000000198	GFI1	100	80.615	ENSMUSG00000029275	Gfi1	100	79.905	Mus_musculus
ENSEEUG00000000198	GFI1	100	79.433	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSEEUG00000000198	GFI1	100	79.905	MGP_SPRETEiJ_G0028507	Gfi1	100	79.669	Mus_spretus
ENSEEUG00000000198	GFI1	100	78.469	ENSMPUG00000004178	GFI1	97	78.469	Mustela_putorius_furo
ENSEEUG00000000198	GFI1	100	82.381	ENSMLUG00000015191	GFI1	97	81.667	Myotis_lucifugus
ENSEEUG00000000198	GFI1	100	62.238	ENSNBRG00000015774	gfi1ab	100	61.124	Neolamprologus_brichardi
ENSEEUG00000000198	GFI1	93	83.887	ENSNLEG00000010470	GFI1	97	83.887	Nomascus_leucogenys
ENSEEUG00000000198	GFI1	100	84.360	ENSOPRG00000001473	GFI1	100	83.886	Ochotona_princeps
ENSEEUG00000000198	GFI1	100	62.945	ENSONIG00000019246	gfi1ab	100	62.233	Oreochromis_niloticus
ENSEEUG00000000198	GFI1	86	82.240	ENSOCUG00000023553	GFI1	93	82.514	Oryctolagus_cuniculus
ENSEEUG00000000198	GFI1	100	61.667	ENSORLG00000013806	gfi1ab	100	61.005	Oryzias_latipes
ENSEEUG00000000198	GFI1	100	58.962	ENSORLG00000005060	GFI1	100	57.306	Oryzias_latipes
ENSEEUG00000000198	GFI1	100	53.555	ENSORLG00020002817	GFI1	90	59.524	Oryzias_latipes_hni
ENSEEUG00000000198	GFI1	100	61.429	ENSORLG00020001602	gfi1ab	100	61.005	Oryzias_latipes_hni
ENSEEUG00000000198	GFI1	100	57.506	ENSORLG00015006070	GFI1	100	57.241	Oryzias_latipes_hsok
ENSEEUG00000000198	GFI1	100	58.711	ENSOMEG00000016722	GFI1	100	57.882	Oryzias_melastigma
ENSEEUG00000000198	GFI1	100	77.831	ENSOGAG00000027913	GFI1	100	78.313	Otolemur_garnettii
ENSEEUG00000000198	GFI1	98	97.143	ENSOARG00000016329	GFI1	94	97.143	Ovis_aries
ENSEEUG00000000198	GFI1	100	80.241	ENSPPAG00000042186	GFI1	100	80.241	Pan_paniscus
ENSEEUG00000000198	GFI1	100	85.308	ENSPPRG00000007521	GFI1	100	85.782	Panthera_pardus
ENSEEUG00000000198	GFI1	100	86.019	ENSPTRG00000043053	GFI1	100	86.019	Pan_troglodytes
ENSEEUG00000000198	GFI1	100	85.071	ENSPANG00000016433	GFI1	100	85.071	Papio_anubis
ENSEEUG00000000198	GFI1	100	63.466	ENSPKIG00000004263	GFI1	100	62.763	Paramormyrops_kingsleyae
ENSEEUG00000000198	GFI1	88	73.442	ENSPSIG00000008734	GFI1	97	73.171	Pelodiscus_sinensis
ENSEEUG00000000198	GFI1	100	58.768	ENSPMGG00000012546	gfi1ab	100	58.768	Periophthalmus_magnuspinnatus
ENSEEUG00000000198	GFI1	99	92.771	ENSPMGG00000011041	GFI1	53	92.771	Periophthalmus_magnuspinnatus
ENSEEUG00000000198	GFI1	100	77.594	ENSPCIG00000013728	GFI1	100	78.302	Phascolarctos_cinereus
ENSEEUG00000000198	GFI1	100	60.849	ENSPFOG00000023214	gfi1ab	100	60.613	Poecilia_formosa
ENSEEUG00000000198	GFI1	100	60.849	ENSPLAG00000010879	gfi1ab	98	73.529	Poecilia_latipinna
ENSEEUG00000000198	GFI1	100	60.140	ENSPLAG00000005376	GFI1	91	60.570	Poecilia_latipinna
ENSEEUG00000000198	GFI1	100	60.849	ENSPMEG00000013694	gfi1ab	100	60.613	Poecilia_mexicana
ENSEEUG00000000198	GFI1	100	59.112	ENSPMEG00000019299	GFI1	100	60.280	Poecilia_mexicana
ENSEEUG00000000198	GFI1	100	60.849	ENSPREG00000014097	gfi1ab	100	59.434	Poecilia_reticulata
ENSEEUG00000000198	GFI1	100	51.474	ENSPREG00000007997	GFI1	100	52.644	Poecilia_reticulata
ENSEEUG00000000198	GFI1	100	72.706	ENSPCAG00000011020	GFI1	100	72.706	Procavia_capensis
ENSEEUG00000000198	GFI1	100	84.360	ENSPCOG00000020540	GFI1	100	84.360	Propithecus_coquereli
ENSEEUG00000000198	GFI1	100	83.254	ENSPVAG00000006928	GFI1	100	84.450	Pteropus_vampyrus
ENSEEUG00000000198	GFI1	100	63.420	ENSPNYG00000021183	gfi1ab	100	62.233	Pundamilia_nyererei
ENSEEUG00000000198	GFI1	100	61.244	ENSPNAG00000027258	gfi1ab	100	60.526	Pygocentrus_nattereri
ENSEEUG00000000198	GFI1	100	54.567	ENSPNAG00000028014	GFI1	100	54.333	Pygocentrus_nattereri
ENSEEUG00000000198	GFI1	100	79.905	ENSRNOG00000002042	Gfi1	100	79.196	Rattus_norvegicus
ENSEEUG00000000198	GFI1	100	85.308	ENSRBIG00000036467	GFI1	100	85.308	Rhinopithecus_bieti
ENSEEUG00000000198	GFI1	100	85.308	ENSRROG00000031687	GFI1	100	85.308	Rhinopithecus_roxellana
ENSEEUG00000000198	GFI1	100	83.649	ENSSBOG00000031300	GFI1	100	84.360	Saimiri_boliviensis_boliviensis
ENSEEUG00000000198	GFI1	100	66.033	ENSSFOG00015020295	gfi1	100	66.033	Scleropages_formosus
ENSEEUG00000000198	GFI1	100	61.033	ENSSMAG00000002782	gfi1ab	100	60.613	Scophthalmus_maximus
ENSEEUG00000000198	GFI1	100	62.110	ENSSDUG00000022410	gfi1ab	100	62.110	Seriola_dumerili
ENSEEUG00000000198	GFI1	100	61.631	ENSSLDG00000020163	gfi1ab	100	61.814	Seriola_lalandi_dorsalis
ENSEEUG00000000198	GFI1	100	66.558	ENSSPAG00000009140	gfi1ab	100	67.532	Stegastes_partitus
ENSEEUG00000000198	GFI1	100	86.058	ENSSSCG00000006902	GFI1	100	86.058	Sus_scrofa
ENSEEUG00000000198	GFI1	88	71.311	ENSTGUG00000006060	GFI1	100	71.038	Taeniopygia_guttata
ENSEEUG00000000198	GFI1	100	59.390	ENSTRUG00000000415	gfi1ab	100	58.726	Takifugu_rubripes
ENSEEUG00000000198	GFI1	100	60.143	ENSTNIG00000000651	gfi1ab	97	59.189	Tetraodon_nigroviridis
ENSEEUG00000000198	GFI1	100	84.286	ENSTTRG00000000082	GFI1	100	84.762	Tursiops_truncatus
ENSEEUG00000000198	GFI1	100	82.339	ENSUAMG00000021124	GFI1	91	82.578	Ursus_americanus
ENSEEUG00000000198	GFI1	100	65.468	ENSXETG00000023006	gfi1	98	65.468	Xenopus_tropicalis
ENSEEUG00000000198	GFI1	100	60.377	ENSXMAG00000010523	gfi1ab	100	60.142	Xiphophorus_maculatus
ENSEEUG00000000198	GFI1	100	52.291	ENSXMAG00000009274	GFI1	70	53.226	Xiphophorus_maculatus
ENSEEUG00000000198	GFI1	59	48.963	ENSXMAG00000006527	-	58	55.208	Xiphophorus_maculatus