EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000000294 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 15809 bases
Position: chrGeneScaffold_3023:14423-30231
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000000259	TRM13	PF05206.14	6.7e-42	1	2
ENSEEUP00000000259	TRM13	PF05206.14	6.7e-42	2	2
ENSEEUP00000000259	zf-U11-48K	PF05253.12	2.6e-09	1	1
ENSEEUP00000000259	zf-TRM13_CCCH	PF11722.8	2.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000000294	TRMT13-201	1425	-	ENSEEUP00000000259	474 (aa)	-	UPI0000F62B3D

Gene Model

Click here to download ENSEEUG00000000294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000000294's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000000294	TRMT13	80	80.696	ENSG00000122435	TRMT13	95	86.747	Homo_sapiens
ENSEEUG00000000294	TRMT13	72	52.727	ENSAPOG00000015131	trmt13	75	52.727	Acanthochromis_polyacanthus
ENSEEUG00000000294	TRMT13	80	80.696	ENSAMEG00000008917	TRMT13	79	80.696	Ailuropoda_melanoleuca
ENSEEUG00000000294	TRMT13	71	51.852	ENSACIG00000005804	trmt13	94	46.667	Amphilophus_citrinellus
ENSEEUG00000000294	TRMT13	72	52.727	ENSAOCG00000023585	trmt13	76	52.727	Amphiprion_ocellaris
ENSEEUG00000000294	TRMT13	72	52.727	ENSAPEG00000004025	trmt13	76	52.727	Amphiprion_percula
ENSEEUG00000000294	TRMT13	76	52.381	ENSATEG00000006597	trmt13	76	52.381	Anabas_testudineus
ENSEEUG00000000294	TRMT13	67	66.038	ENSAPLG00000014924	TRMT13	76	66.038	Anas_platyrhynchos
ENSEEUG00000000294	TRMT13	74	59.649	ENSACAG00000003498	TRMT13	75	59.649	Anolis_carolinensis
ENSEEUG00000000294	TRMT13	80	80.696	ENSANAG00000019525	TRMT13	96	85.714	Aotus_nancymaae
ENSEEUG00000000294	TRMT13	73	56.667	ENSACLG00000020018	trmt13	78	56.667	Astatotilapia_calliptera
ENSEEUG00000000294	TRMT13	73	60.377	ENSAMXG00000017963	trmt13	74	60.377	Astyanax_mexicanus
ENSEEUG00000000294	TRMT13	80	79.747	ENSBTAG00000015781	TRMT13	79	79.747	Bos_taurus
ENSEEUG00000000294	TRMT13	80	79.114	ENSCJAG00000000200	TRMT13	95	85.714	Callithrix_jacchus
ENSEEUG00000000294	TRMT13	51	92.500	ENSCAFG00020011572	TRMT13	83	92.500	Canis_lupus_dingo
ENSEEUG00000000294	TRMT13	80	80.063	ENSCHIG00000015395	TRMT13	79	80.063	Capra_hircus
ENSEEUG00000000294	TRMT13	75	77.816	ENSTSYG00000010811	TRMT13	98	80.808	Carlito_syrichta
ENSEEUG00000000294	TRMT13	55	55.224	ENSCAPG00000009085	TRMT13	69	55.970	Cavia_aperea
ENSEEUG00000000294	TRMT13	80	79.430	ENSCPOG00000000694	TRMT13	79	79.430	Cavia_porcellus
ENSEEUG00000000294	TRMT13	80	81.013	ENSCCAG00000023772	TRMT13	96	85.714	Cebus_capucinus
ENSEEUG00000000294	TRMT13	80	80.696	ENSCATG00000033556	TRMT13	96	84.762	Cercocebus_atys
ENSEEUG00000000294	TRMT13	68	77.778	ENSCLAG00000008220	TRMT13	77	76.562	Chinchilla_lanigera
ENSEEUG00000000294	TRMT13	80	81.329	ENSCSAG00000001506	TRMT13	79	81.329	Chlorocebus_sabaeus
ENSEEUG00000000294	TRMT13	78	64.062	ENSCPBG00000026671	TRMT13	78	64.062	Chrysemys_picta_bellii
ENSEEUG00000000294	TRMT13	80	81.646	ENSCANG00000034659	TRMT13	96	85.714	Colobus_angolensis_palliatus
ENSEEUG00000000294	TRMT13	79	77.287	ENSCGRG00001021601	Trmt13	79	77.287	Cricetulus_griseus_chok1gshd
ENSEEUG00000000294	TRMT13	75	50.000	ENSCSEG00000000591	trmt13	81	50.000	Cynoglossus_semilaevis
ENSEEUG00000000294	TRMT13	72	56.364	ENSCVAG00000017342	trmt13	72	56.364	Cyprinodon_variegatus
ENSEEUG00000000294	TRMT13	72	57.407	ENSDARG00000102846	trmt13	73	57.407	Danio_rerio
ENSEEUG00000000294	TRMT13	51	86.235	ENSDNOG00000001710	TRMT13	75	86.235	Dasypus_novemcinctus
ENSEEUG00000000294	TRMT13	79	77.955	ENSDORG00000015808	Trmt13	78	77.955	Dipodomys_ordii
ENSEEUG00000000294	TRMT13	62	39.344	FBgn0037435	CG18048	70	39.344	Drosophila_melanogaster
ENSEEUG00000000294	TRMT13	78	75.862	ENSETEG00000005819	TRMT13	78	75.862	Echinops_telfairi
ENSEEUG00000000294	TRMT13	73	54.717	ENSEBUG00000014444	trmt13	77	54.717	Eptatretus_burgeri
ENSEEUG00000000294	TRMT13	80	82.595	ENSEASG00005015918	TRMT13	79	82.595	Equus_asinus_asinus
ENSEEUG00000000294	TRMT13	80	82.595	ENSECAG00000022626	TRMT13	79	82.595	Equus_caballus
ENSEEUG00000000294	TRMT13	74	57.143	ENSELUG00000003803	trmt13	75	57.143	Esox_lucius
ENSEEUG00000000294	TRMT13	80	81.646	ENSFCAG00000030618	TRMT13	96	86.667	Felis_catus
ENSEEUG00000000294	TRMT13	80	58.147	ENSFALG00000002424	TRMT13	79	58.147	Ficedula_albicollis
ENSEEUG00000000294	TRMT13	78	79.430	ENSFDAG00000006342	TRMT13	78	79.430	Fukomys_damarensis
ENSEEUG00000000294	TRMT13	61	46.918	ENSFHEG00000022954	trmt13	71	46.918	Fundulus_heteroclitus
ENSEEUG00000000294	TRMT13	67	60.377	ENSGMOG00000013223	trmt13	79	60.377	Gadus_morhua
ENSEEUG00000000294	TRMT13	72	65.455	ENSGALG00000005290	TRMT13	77	65.455	Gallus_gallus
ENSEEUG00000000294	TRMT13	57	46.643	ENSGAFG00000001577	trmt13	70	49.784	Gambusia_affinis
ENSEEUG00000000294	TRMT13	72	50.172	ENSGACG00000013428	trmt13	76	49.474	Gasterosteus_aculeatus
ENSEEUG00000000294	TRMT13	79	65.079	ENSGAGG00000023303	TRMT13	89	72.470	Gopherus_agassizii
ENSEEUG00000000294	TRMT13	80	80.380	ENSGGOG00000005616	TRMT13	96	82.857	Gorilla_gorilla
ENSEEUG00000000294	TRMT13	73	58.333	ENSHBUG00000007754	trmt13	78	58.333	Haplochromis_burtoni
ENSEEUG00000000294	TRMT13	78	80.063	ENSHGLG00000002164	TRMT13	78	80.063	Heterocephalus_glaber_female
ENSEEUG00000000294	TRMT13	78	80.063	ENSHGLG00100001618	TRMT13	78	80.063	Heterocephalus_glaber_male
ENSEEUG00000000294	TRMT13	59	51.724	ENSHCOG00000020553	trmt13	66	52.137	Hippocampus_comes
ENSEEUG00000000294	TRMT13	74	57.407	ENSIPUG00000024787	trmt13	80	58.120	Ictalurus_punctatus
ENSEEUG00000000294	TRMT13	80	81.962	ENSSTOG00000013483	TRMT13	79	81.962	Ictidomys_tridecemlineatus
ENSEEUG00000000294	TRMT13	78	80.952	ENSJJAG00000018012	Trmt13	78	80.952	Jaculus_jaculus
ENSEEUG00000000294	TRMT13	73	53.448	ENSLBEG00000020238	trmt13	78	53.448	Labrus_bergylta
ENSEEUG00000000294	TRMT13	78	58.621	ENSLACG00000013153	TRMT13	78	58.621	Latimeria_chalumnae
ENSEEUG00000000294	TRMT13	73	61.111	ENSLOCG00000000418	trmt13	76	61.111	Lepisosteus_oculatus
ENSEEUG00000000294	TRMT13	57	75.000	ENSLAFG00000002383	TRMT13	74	75.000	Loxodonta_africana
ENSEEUG00000000294	TRMT13	80	81.329	ENSMFAG00000034681	TRMT13	96	85.714	Macaca_fascicularis
ENSEEUG00000000294	TRMT13	80	81.329	ENSMMUG00000004243	TRMT13	96	85.714	Macaca_mulatta
ENSEEUG00000000294	TRMT13	80	81.329	ENSMNEG00000036102	TRMT13	96	85.714	Macaca_nemestrina
ENSEEUG00000000294	TRMT13	80	80.696	ENSMLEG00000034258	TRMT13	96	84.762	Mandrillus_leucophaeus
ENSEEUG00000000294	TRMT13	73	52.381	ENSMAMG00000016597	trmt13	74	52.381	Mastacembelus_armatus
ENSEEUG00000000294	TRMT13	73	56.667	ENSMZEG00005020959	trmt13	78	56.667	Maylandia_zebra
ENSEEUG00000000294	TRMT13	68	62.069	ENSMGAG00000006970	TRMT13	77	62.069	Meleagris_gallopavo
ENSEEUG00000000294	TRMT13	76	79.866	ENSMAUG00000010448	Trmt13	75	79.866	Mesocricetus_auratus
ENSEEUG00000000294	TRMT13	80	80.380	ENSMICG00000005283	TRMT13	95	84.615	Microcebus_murinus
ENSEEUG00000000294	TRMT13	75	79.195	ENSMOCG00000019914	Trmt13	74	79.195	Microtus_ochrogaster
ENSEEUG00000000294	TRMT13	77	73.052	ENSMODG00000003646	TRMT13	77	73.052	Monodelphis_domestica
ENSEEUG00000000294	TRMT13	69	59.322	ENSMALG00000020965	trmt13	90	44.526	Monopterus_albus
ENSEEUG00000000294	TRMT13	78	76.358	MGP_CAROLIEiJ_G0025568	Trmt13	94	86.905	Mus_caroli
ENSEEUG00000000294	TRMT13	78	76.271	ENSMUSG00000033439	Trmt13	94	86.905	Mus_musculus
ENSEEUG00000000294	TRMT13	78	77.586	MGP_PahariEiJ_G0027014	Trmt13	93	88.554	Mus_pahari
ENSEEUG00000000294	TRMT13	78	76.271	MGP_SPRETEiJ_G0026518	Trmt13	94	86.905	Mus_spretus
ENSEEUG00000000294	TRMT13	59	78.636	ENSMPUG00000002078	-	78	78.636	Mustela_putorius_furo
ENSEEUG00000000294	TRMT13	76	81.544	ENSMLUG00000002124	TRMT13	75	81.544	Myotis_lucifugus
ENSEEUG00000000294	TRMT13	73	58.333	ENSNBRG00000006783	trmt13	73	59.259	Neolamprologus_brichardi
ENSEEUG00000000294	TRMT13	80	80.696	ENSNLEG00000035917	TRMT13	96	84.762	Nomascus_leucogenys
ENSEEUG00000000294	TRMT13	51	72.840	ENSMEUG00000013346	-	98	72.840	Notamacropus_eugenii
ENSEEUG00000000294	TRMT13	61	88.889	ENSOPRG00000012048	TRMT13	60	88.889	Ochotona_princeps
ENSEEUG00000000294	TRMT13	73	58.333	ENSONIG00000004574	trmt13	78	58.333	Oreochromis_niloticus
ENSEEUG00000000294	TRMT13	66	70.751	ENSOANG00000012057	TRMT13	72	70.751	Ornithorhynchus_anatinus
ENSEEUG00000000294	TRMT13	80	80.317	ENSOCUG00000023095	TRMT13	79	80.317	Oryctolagus_cuniculus
ENSEEUG00000000294	TRMT13	73	55.932	ENSORLG00000003320	trmt13	75	55.932	Oryzias_latipes
ENSEEUG00000000294	TRMT13	72	55.769	ENSORLG00020005972	trmt13	73	55.769	Oryzias_latipes_hni
ENSEEUG00000000294	TRMT13	73	55.932	ENSORLG00015002270	trmt13	76	55.932	Oryzias_latipes_hsok
ENSEEUG00000000294	TRMT13	74	54.237	ENSOMEG00000006724	trmt13	74	54.237	Oryzias_melastigma
ENSEEUG00000000294	TRMT13	78	82.143	ENSOGAG00000005618	TRMT13	76	79.747	Otolemur_garnettii
ENSEEUG00000000294	TRMT13	80	80.063	ENSOARG00000017983	TRMT13	79	80.063	Ovis_aries
ENSEEUG00000000294	TRMT13	80	80.380	ENSPPAG00000043736	TRMT13	96	83.810	Pan_paniscus
ENSEEUG00000000294	TRMT13	80	81.646	ENSPPRG00000003424	TRMT13	96	86.667	Panthera_pardus
ENSEEUG00000000294	TRMT13	80	81.646	ENSPTIG00000018598	TRMT13	96	86.667	Panthera_tigris_altaica
ENSEEUG00000000294	TRMT13	80	80.380	ENSPTRG00000001001	TRMT13	96	83.810	Pan_troglodytes
ENSEEUG00000000294	TRMT13	80	81.329	ENSPANG00000007598	TRMT13	96	85.714	Papio_anubis
ENSEEUG00000000294	TRMT13	74	54.237	ENSPKIG00000001514	trmt13	78	54.237	Paramormyrops_kingsleyae
ENSEEUG00000000294	TRMT13	67	68.750	ENSPSIG00000012703	TRMT13	77	68.750	Pelodiscus_sinensis
ENSEEUG00000000294	TRMT13	72	55.556	ENSPMGG00000013298	trmt13	72	55.556	Periophthalmus_magnuspinnatus
ENSEEUG00000000294	TRMT13	77	77.451	ENSPEMG00000000275	Trmt13	76	77.451	Peromyscus_maniculatus_bairdii
ENSEEUG00000000294	TRMT13	67	48.375	ENSPMAG00000000823	trmt13	69	48.043	Petromyzon_marinus
ENSEEUG00000000294	TRMT13	79	69.401	ENSPCIG00000007699	TRMT13	79	70.032	Phascolarctos_cinereus
ENSEEUG00000000294	TRMT13	76	57.377	ENSPFOG00000008675	trmt13	78	57.377	Poecilia_formosa
ENSEEUG00000000294	TRMT13	73	60.000	ENSPLAG00000009709	trmt13	79	60.000	Poecilia_latipinna
ENSEEUG00000000294	TRMT13	73	56.364	ENSPMEG00000022954	trmt13	79	56.364	Poecilia_mexicana
ENSEEUG00000000294	TRMT13	61	45.485	ENSPREG00000005645	trmt13	80	47.967	Poecilia_reticulata
ENSEEUG00000000294	TRMT13	80	80.696	ENSPPYG00000001120	TRMT13	79	80.696	Pongo_abelii
ENSEEUG00000000294	TRMT13	79	80.328	ENSPCAG00000002340	TRMT13	78	80.328	Procavia_capensis
ENSEEUG00000000294	TRMT13	80	80.063	ENSPCOG00000017984	TRMT13	96	84.762	Propithecus_coquereli
ENSEEUG00000000294	TRMT13	79	81.470	ENSPVAG00000017430	TRMT13	78	81.470	Pteropus_vampyrus
ENSEEUG00000000294	TRMT13	73	58.333	ENSPNYG00000013690	trmt13	77	58.333	Pundamilia_nyererei
ENSEEUG00000000294	TRMT13	73	60.377	ENSPNAG00000022130	trmt13	73	60.377	Pygocentrus_nattereri
ENSEEUG00000000294	TRMT13	78	77.586	ENSRNOG00000015140	Trmt13	75	77.586	Rattus_norvegicus
ENSEEUG00000000294	TRMT13	80	81.646	ENSRBIG00000037686	TRMT13	96	85.714	Rhinopithecus_bieti
ENSEEUG00000000294	TRMT13	80	81.646	ENSRROG00000044057	TRMT13	96	85.714	Rhinopithecus_roxellana
ENSEEUG00000000294	TRMT13	80	80.380	ENSSBOG00000026541	TRMT13	96	85.714	Saimiri_boliviensis_boliviensis
ENSEEUG00000000294	TRMT13	71	71.875	ENSSHAG00000005213	TRMT13	75	71.875	Sarcophilus_harrisii
ENSEEUG00000000294	TRMT13	77	51.724	ENSSFOG00015017560	trmt13	80	51.724	Scleropages_formosus
ENSEEUG00000000294	TRMT13	74	51.667	ENSSMAG00000014592	trmt13	73	51.667	Scophthalmus_maximus
ENSEEUG00000000294	TRMT13	72	53.704	ENSSDUG00000015508	trmt13	72	54.237	Seriola_dumerili
ENSEEUG00000000294	TRMT13	73	52.727	ENSSLDG00000019060	trmt13	72	52.727	Seriola_lalandi_dorsalis
ENSEEUG00000000294	TRMT13	77	84.375	ENSSARG00000010344	TRMT13	77	84.375	Sorex_araneus
ENSEEUG00000000294	TRMT13	73	72.414	ENSSPUG00000016339	TRMT13	75	72.414	Sphenodon_punctatus
ENSEEUG00000000294	TRMT13	71	51.852	ENSSPAG00000011922	trmt13	75	50.345	Stegastes_partitus
ENSEEUG00000000294	TRMT13	80	81.329	ENSSSCG00000006869	TRMT13	79	81.329	Sus_scrofa
ENSEEUG00000000294	TRMT13	74	61.672	ENSTGUG00000005253	TRMT13	76	61.672	Taeniopygia_guttata
ENSEEUG00000000294	TRMT13	68	51.923	ENSTRUG00000008400	trmt13	73	51.667	Takifugu_rubripes
ENSEEUG00000000294	TRMT13	67	82.812	ENSTBEG00000008911	TRMT13	76	82.812	Tupaia_belangeri
ENSEEUG00000000294	TRMT13	80	79.688	ENSUAMG00000017251	TRMT13	78	79.688	Ursus_americanus
ENSEEUG00000000294	TRMT13	80	80.380	ENSUMAG00000007901	TRMT13	79	80.380	Ursus_maritimus
ENSEEUG00000000294	TRMT13	70	75.000	ENSVPAG00000001034	TRMT13	77	75.000	Vicugna_pacos
ENSEEUG00000000294	TRMT13	79	81.789	ENSVVUG00000021996	TRMT13	78	81.789	Vulpes_vulpes
ENSEEUG00000000294	TRMT13	76	68.519	ENSXETG00000013204	trmt13	77	68.519	Xenopus_tropicalis
ENSEEUG00000000294	TRMT13	74	56.364	ENSXMAG00000010765	trmt13	80	56.364	Xiphophorus_maculatus