EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000000413 (Gene tree)
Gene ID: -
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 38071 bases
Position: chrGeneScaffold_1478:9633-47703
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000000366	HAT	PF02184.16	1.5e-41	1	2
ENSEEUP00000000366	HAT	PF02184.16	1.5e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000000414	CRNKL1-201	2235	-	ENSEEUP00000000366	744 (aa)	-	UPI0000F64322

Gene Model

Click here to download ENSEEUG00000000413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000000413's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000000413	CRNKL1	100	90.604	ENSG00000101343	CRNKL1	99	93.824	Homo_sapiens
ENSEEUG00000000413	CRNKL1	92	84.088	ENSAPOG00000009705	crnkl1	97	83.582	Acanthochromis_polyacanthus
ENSEEUG00000000413	CRNKL1	99	92.982	ENSAMEG00000000270	CRNKL1	89	92.982	Ailuropoda_melanoleuca
ENSEEUG00000000413	CRNKL1	91	83.531	ENSACIG00000015267	crnkl1	89	83.408	Amphilophus_citrinellus
ENSEEUG00000000413	CRNKL1	92	84.234	ENSAOCG00000021964	crnkl1	90	84.118	Amphiprion_ocellaris
ENSEEUG00000000413	CRNKL1	92	84.088	ENSAPEG00000015041	crnkl1	90	83.971	Amphiprion_percula
ENSEEUG00000000413	CRNKL1	91	83.676	ENSATEG00000001068	crnkl1	89	83.556	Anabas_testudineus
ENSEEUG00000000413	CRNKL1	92	87.918	ENSAPLG00000013105	CRNKL1	98	89.717	Anas_platyrhynchos
ENSEEUG00000000413	CRNKL1	92	90.337	ENSACAG00000005284	CRNKL1	99	90.265	Anolis_carolinensis
ENSEEUG00000000413	CRNKL1	85	94.304	ENSANAG00000024889	CRNKL1	99	94.240	Aotus_nancymaae
ENSEEUG00000000413	CRNKL1	92	84.480	ENSACLG00000010813	crnkl1	89	84.821	Astatotilapia_calliptera
ENSEEUG00000000413	CRNKL1	89	85.241	ENSAMXG00000018334	crnkl1	92	83.235	Astyanax_mexicanus
ENSEEUG00000000413	CRNKL1	92	95.051	ENSBTAG00000008472	CRNKL1	99	95.051	Bos_taurus
ENSEEUG00000000413	CRNKL1	86	60.498	WBGene00019762	M03F8.3	91	60.000	Caenorhabditis_elegans
ENSEEUG00000000413	CRNKL1	92	93.886	ENSCJAG00000005393	CRNKL1	99	93.824	Callithrix_jacchus
ENSEEUG00000000413	CRNKL1	98	92.455	ENSCAFG00000005333	CRNKL1	100	92.455	Canis_familiaris
ENSEEUG00000000413	CRNKL1	92	96.215	ENSCAFG00020027488	CRNKL1	100	96.215	Canis_lupus_dingo
ENSEEUG00000000413	CRNKL1	92	93.886	ENSCHIG00000013171	CRNKL1	99	93.886	Capra_hircus
ENSEEUG00000000413	CRNKL1	92	94.760	ENSTSYG00000004197	CRNKL1	99	94.706	Carlito_syrichta
ENSEEUG00000000413	CRNKL1	88	92.892	ENSCAPG00000010501	CRNKL1	99	92.892	Cavia_aperea
ENSEEUG00000000413	CRNKL1	92	93.450	ENSCPOG00000004418	CRNKL1	99	93.382	Cavia_porcellus
ENSEEUG00000000413	CRNKL1	92	93.886	ENSCCAG00000027037	CRNKL1	99	93.824	Cebus_capucinus
ENSEEUG00000000413	CRNKL1	100	88.993	ENSCATG00000034247	CRNKL1	99	94.118	Cercocebus_atys
ENSEEUG00000000413	CRNKL1	92	94.178	ENSCLAG00000013859	CRNKL1	99	94.118	Chinchilla_lanigera
ENSEEUG00000000413	CRNKL1	92	94.178	ENSCSAG00000011434	CRNKL1	99	94.118	Chlorocebus_sabaeus
ENSEEUG00000000413	CRNKL1	99	90.751	ENSCHOG00000006371	CRNKL1	90	89.840	Choloepus_hoffmanni
ENSEEUG00000000413	CRNKL1	92	91.387	ENSCPBG00000023501	CRNKL1	99	91.324	Chrysemys_picta_bellii
ENSEEUG00000000413	CRNKL1	89	67.523	ENSCING00000002709	-	99	66.176	Ciona_intestinalis
ENSEEUG00000000413	CRNKL1	99	89.247	ENSCANG00000038789	CRNKL1	99	94.265	Colobus_angolensis_palliatus
ENSEEUG00000000413	CRNKL1	92	94.760	ENSCGRG00001001115	-	99	94.706	Cricetulus_griseus_chok1gshd
ENSEEUG00000000413	CRNKL1	92	94.760	ENSCGRG00001000687	-	99	94.706	Cricetulus_griseus_chok1gshd
ENSEEUG00000000413	CRNKL1	92	94.760	ENSCGRG00000007854	Crnkl1	99	94.706	Cricetulus_griseus_crigri
ENSEEUG00000000413	CRNKL1	91	84.000	ENSCSEG00000005594	crnkl1	85	83.881	Cynoglossus_semilaevis
ENSEEUG00000000413	CRNKL1	90	84.835	ENSCVAG00000015172	crnkl1	92	82.794	Cyprinodon_variegatus
ENSEEUG00000000413	CRNKL1	89	84.290	ENSDARG00000007901	crnkl1	90	82.916	Danio_rerio
ENSEEUG00000000413	CRNKL1	92	95.760	ENSDNOG00000016226	CRNKL1	94	95.716	Dasypus_novemcinctus
ENSEEUG00000000413	CRNKL1	90	84.925	ENSDORG00000030174	-	98	85.068	Dipodomys_ordii
ENSEEUG00000000413	CRNKL1	90	85.373	ENSDORG00000023724	-	98	85.822	Dipodomys_ordii
ENSEEUG00000000413	CRNKL1	92	93.362	ENSDORG00000000394	-	99	93.294	Dipodomys_ordii
ENSEEUG00000000413	CRNKL1	90	67.012	FBgn0000377	crn	95	67.568	Drosophila_melanogaster
ENSEEUG00000000413	CRNKL1	99	84.253	ENSETEG00000003711	CRNKL1	90	84.253	Echinops_telfairi
ENSEEUG00000000413	CRNKL1	91	57.371	ENSEBUG00000013461	crnkl1	95	55.817	Eptatretus_burgeri
ENSEEUG00000000413	CRNKL1	92	96.215	ENSEASG00005002072	CRNKL1	100	96.215	Equus_asinus_asinus
ENSEEUG00000000413	CRNKL1	92	96.215	ENSECAG00000022215	CRNKL1	100	96.215	Equus_caballus
ENSEEUG00000000413	CRNKL1	90	83.433	ENSELUG00000015424	crnkl1	97	82.258	Esox_lucius
ENSEEUG00000000413	CRNKL1	92	96.507	ENSFCAG00000000714	CRNKL1	100	96.507	Felis_catus
ENSEEUG00000000413	CRNKL1	90	89.137	ENSFALG00000004611	CRNKL1	100	89.137	Ficedula_albicollis
ENSEEUG00000000413	CRNKL1	92	94.178	ENSFDAG00000000604	CRNKL1	99	94.118	Fukomys_damarensis
ENSEEUG00000000413	CRNKL1	90	83.952	ENSFHEG00000013163	crnkl1	87	83.832	Fundulus_heteroclitus
ENSEEUG00000000413	CRNKL1	90	83.234	ENSGMOG00000007609	crnkl1	94	81.498	Gadus_morhua
ENSEEUG00000000413	CRNKL1	92	91.387	ENSGALG00000008429	CRNKL1	99	91.324	Gallus_gallus
ENSEEUG00000000413	CRNKL1	93	81.766	ENSGAFG00000014249	crnkl1	93	79.859	Gambusia_affinis
ENSEEUG00000000413	CRNKL1	92	82.456	ENSGACG00000011852	crnkl1	90	82.327	Gasterosteus_aculeatus
ENSEEUG00000000413	CRNKL1	88	89.634	ENSGAGG00000021233	CRNKL1	100	89.716	Gopherus_agassizii
ENSEEUG00000000413	CRNKL1	100	90.336	ENSGGOG00000014176	CRNKL1	99	93.824	Gorilla_gorilla
ENSEEUG00000000413	CRNKL1	91	84.786	ENSHBUG00000005246	crnkl1	89	84.673	Haplochromis_burtoni
ENSEEUG00000000413	CRNKL1	92	94.178	ENSHGLG00000010856	CRNKL1	99	94.118	Heterocephalus_glaber_female
ENSEEUG00000000413	CRNKL1	92	94.178	ENSHGLG00100011521	CRNKL1	99	94.118	Heterocephalus_glaber_male
ENSEEUG00000000413	CRNKL1	90	82.009	ENSHCOG00000006420	crnkl1	97	80.502	Hippocampus_comes
ENSEEUG00000000413	CRNKL1	89	73.835	ENSIPUG00000006836	-	98	73.244	Ictalurus_punctatus
ENSEEUG00000000413	CRNKL1	85	65.777	ENSIPUG00000000315	-	99	67.091	Ictalurus_punctatus
ENSEEUG00000000413	CRNKL1	87	84.438	ENSIPUG00000006751	crnkl1	93	82.687	Ictalurus_punctatus
ENSEEUG00000000413	CRNKL1	92	95.197	ENSSTOG00000014747	CRNKL1	99	95.147	Ictidomys_tridecemlineatus
ENSEEUG00000000413	CRNKL1	92	92.888	ENSJJAG00000016926	Crnkl1	99	92.816	Jaculus_jaculus
ENSEEUG00000000413	CRNKL1	92	83.871	ENSKMAG00000003620	crnkl1	86	83.752	Kryptolebias_marmoratus
ENSEEUG00000000413	CRNKL1	90	61.642	ENSLBEG00000003543	crnkl1	91	69.956	Labrus_bergylta
ENSEEUG00000000413	CRNKL1	92	85.652	ENSLACG00000001129	CRNKL1	99	85.546	Latimeria_chalumnae
ENSEEUG00000000413	CRNKL1	89	86.596	ENSLOCG00000016889	crnkl1	94	85.125	Lepisosteus_oculatus
ENSEEUG00000000413	CRNKL1	92	95.203	ENSLAFG00000004512	CRNKL1	99	95.888	Loxodonta_africana
ENSEEUG00000000413	CRNKL1	100	88.549	ENSMFAG00000039893	CRNKL1	99	94.118	Macaca_fascicularis
ENSEEUG00000000413	CRNKL1	100	88.415	ENSMMUG00000007709	CRNKL1	99	94.118	Macaca_mulatta
ENSEEUG00000000413	CRNKL1	100	88.415	ENSMNEG00000037490	CRNKL1	99	94.118	Macaca_nemestrina
ENSEEUG00000000413	CRNKL1	100	88.282	ENSMLEG00000034885	CRNKL1	99	94.118	Mandrillus_leucophaeus
ENSEEUG00000000413	CRNKL1	92	83.796	ENSMAMG00000008757	crnkl1	90	83.676	Mastacembelus_armatus
ENSEEUG00000000413	CRNKL1	91	84.934	ENSMZEG00005022345	crnkl1	89	84.821	Maylandia_zebra
ENSEEUG00000000413	CRNKL1	92	90.671	ENSMGAG00000003452	CRNKL1	93	90.602	Meleagris_gallopavo
ENSEEUG00000000413	CRNKL1	92	94.614	ENSMAUG00000020764	Crnkl1	99	94.559	Mesocricetus_auratus
ENSEEUG00000000413	CRNKL1	92	95.197	ENSMICG00000006048	CRNKL1	99	95.147	Microcebus_murinus
ENSEEUG00000000413	CRNKL1	89	66.817	ENSMOCG00000004179	-	95	67.166	Microtus_ochrogaster
ENSEEUG00000000413	CRNKL1	92	86.552	ENSMOCG00000000681	-	99	86.416	Microtus_ochrogaster
ENSEEUG00000000413	CRNKL1	85	83.201	ENSMMOG00000017601	crnkl1	96	83.067	Mola_mola
ENSEEUG00000000413	CRNKL1	92	83.988	ENSMODG00000010857	-	98	84.389	Monodelphis_domestica
ENSEEUG00000000413	CRNKL1	93	89.971	ENSMODG00000005961	-	98	89.985	Monodelphis_domestica
ENSEEUG00000000413	CRNKL1	91	60.526	ENSMALG00000011211	crnkl1	87	60.954	Monopterus_albus
ENSEEUG00000000413	CRNKL1	92	95.051	MGP_CAROLIEiJ_G0024394	Crnkl1	99	95.000	Mus_caroli
ENSEEUG00000000413	CRNKL1	92	95.197	ENSMUSG00000001767	Crnkl1	99	95.147	Mus_musculus
ENSEEUG00000000413	CRNKL1	92	93.159	MGP_PahariEiJ_G0025838	Crnkl1	99	93.088	Mus_pahari
ENSEEUG00000000413	CRNKL1	92	95.051	MGP_SPRETEiJ_G0025312	Crnkl1	99	95.000	Mus_spretus
ENSEEUG00000000413	CRNKL1	92	96.361	ENSMPUG00000001226	CRNKL1	100	96.361	Mustela_putorius_furo
ENSEEUG00000000413	CRNKL1	98	92.329	ENSMLUG00000016513	CRNKL1	94	91.507	Myotis_lucifugus
ENSEEUG00000000413	CRNKL1	92	93.143	ENSNGAG00000023097	Crnkl1	99	93.074	Nannospalax_galili
ENSEEUG00000000413	CRNKL1	91	85.081	ENSNBRG00000007867	crnkl1	89	84.970	Neolamprologus_brichardi
ENSEEUG00000000413	CRNKL1	92	90.539	ENSNLEG00000009862	CRNKL1	99	90.441	Nomascus_leucogenys
ENSEEUG00000000413	CRNKL1	92	83.430	ENSMEUG00000002361	-	99	83.407	Notamacropus_eugenii
ENSEEUG00000000413	CRNKL1	90	92.985	ENSMEUG00000012167	-	100	92.985	Notamacropus_eugenii
ENSEEUG00000000413	CRNKL1	79	64.672	ENSOPRG00000009242	-	71	64.672	Ochotona_princeps
ENSEEUG00000000413	CRNKL1	92	94.323	ENSODEG00000012175	CRNKL1	99	94.265	Octodon_degus
ENSEEUG00000000413	CRNKL1	91	85.377	ENSONIG00000018728	crnkl1	89	85.268	Oreochromis_niloticus
ENSEEUG00000000413	CRNKL1	99	90.054	ENSOCUG00000015484	CRNKL1	89	89.812	Oryctolagus_cuniculus
ENSEEUG00000000413	CRNKL1	90	83.333	ENSORLG00000017240	crnkl1	95	80.000	Oryzias_latipes
ENSEEUG00000000413	CRNKL1	90	83.483	ENSORLG00020001742	crnkl1	89	83.359	Oryzias_latipes_hni
ENSEEUG00000000413	CRNKL1	90	83.483	ENSORLG00015019564	crnkl1	88	83.359	Oryzias_latipes_hsok
ENSEEUG00000000413	CRNKL1	92	82.336	ENSOMEG00000019895	crnkl1	91	82.206	Oryzias_melastigma
ENSEEUG00000000413	CRNKL1	92	94.323	ENSOGAG00000011544	CRNKL1	99	94.265	Otolemur_garnettii
ENSEEUG00000000413	CRNKL1	99	91.363	ENSOARG00000002150	CRNKL1	96	91.363	Ovis_aries
ENSEEUG00000000413	CRNKL1	100	89.262	ENSPPAG00000027847	CRNKL1	90	89.262	Pan_paniscus
ENSEEUG00000000413	CRNKL1	92	96.507	ENSPPRG00000001955	CRNKL1	100	96.507	Panthera_pardus
ENSEEUG00000000413	CRNKL1	99	91.153	ENSPTIG00000007393	CRNKL1	100	96.507	Panthera_tigris_altaica
ENSEEUG00000000413	CRNKL1	92	93.741	ENSPTRG00000030609	CRNKL1	99	93.676	Pan_troglodytes
ENSEEUG00000000413	CRNKL1	100	89.128	ENSPANG00000017420	CRNKL1	99	94.118	Papio_anubis
ENSEEUG00000000413	CRNKL1	89	79.699	ENSPKIG00000017093	crnkl1	88	78.877	Paramormyrops_kingsleyae
ENSEEUG00000000413	CRNKL1	92	90.190	ENSPSIG00000012705	CRNKL1	99	90.441	Pelodiscus_sinensis
ENSEEUG00000000413	CRNKL1	91	77.273	ENSPMGG00000006263	crnkl1	95	76.855	Periophthalmus_magnuspinnatus
ENSEEUG00000000413	CRNKL1	92	94.760	ENSPEMG00000000073	-	98	94.706	Peromyscus_maniculatus_bairdii
ENSEEUG00000000413	CRNKL1	92	79.681	ENSPMAG00000002250	crnkl1	99	79.532	Petromyzon_marinus
ENSEEUG00000000413	CRNKL1	98	88.646	ENSPCIG00000025825	CRNKL1	100	88.646	Phascolarctos_cinereus
ENSEEUG00000000413	CRNKL1	90	84.084	ENSPFOG00000005102	crnkl1	92	82.138	Poecilia_formosa
ENSEEUG00000000413	CRNKL1	91	82.794	ENSPLAG00000007288	crnkl1	89	82.018	Poecilia_latipinna
ENSEEUG00000000413	CRNKL1	90	84.234	ENSPMEG00000008865	crnkl1	93	82.284	Poecilia_mexicana
ENSEEUG00000000413	CRNKL1	90	83.784	ENSPREG00000012615	crnkl1	91	81.885	Poecilia_reticulata
ENSEEUG00000000413	CRNKL1	100	90.604	ENSPPYG00000010747	CRNKL1	88	90.604	Pongo_abelii
ENSEEUG00000000413	CRNKL1	100	84.881	ENSPCAG00000003296	CRNKL1	92	84.350	Procavia_capensis
ENSEEUG00000000413	CRNKL1	98	90.261	ENSPCOG00000017608	CRNKL1	88	90.261	Propithecus_coquereli
ENSEEUG00000000413	CRNKL1	100	92.215	ENSPVAG00000006207	CRNKL1	89	91.678	Pteropus_vampyrus
ENSEEUG00000000413	CRNKL1	91	84.786	ENSPNYG00000001977	crnkl1	89	84.673	Pundamilia_nyererei
ENSEEUG00000000413	CRNKL1	90	85.821	ENSPNAG00000001507	crnkl1	97	83.578	Pygocentrus_nattereri
ENSEEUG00000000413	CRNKL1	92	94.760	ENSRNOG00000040045	Crnkl1	99	94.706	Rattus_norvegicus
ENSEEUG00000000413	CRNKL1	92	95.197	ENSRNOG00000010587	Crnkl1	99	95.147	Rattus_norvegicus
ENSEEUG00000000413	CRNKL1	92	94.032	ENSRBIG00000031770	CRNKL1	99	93.971	Rhinopithecus_bieti
ENSEEUG00000000413	CRNKL1	92	93.886	ENSRROG00000040450	CRNKL1	99	93.824	Rhinopithecus_roxellana
ENSEEUG00000000413	CRNKL1	87	36.957	YLR117C	CLF1	99	37.192	Saccharomyces_cerevisiae
ENSEEUG00000000413	CRNKL1	100	87.366	ENSSBOG00000029672	CRNKL1	99	93.824	Saimiri_boliviensis_boliviensis
ENSEEUG00000000413	CRNKL1	88	72.231	ENSSHAG00000011199	CRNKL1	99	72.231	Sarcophilus_harrisii
ENSEEUG00000000413	CRNKL1	89	85.045	ENSSFOG00015000946	crnkl1	88	83.358	Scleropages_formosus
ENSEEUG00000000413	CRNKL1	90	83.905	ENSSMAG00000007933	crnkl1	86	83.784	Scophthalmus_maximus
ENSEEUG00000000413	CRNKL1	91	77.467	ENSSDUG00000012625	crnkl1	86	77.300	Seriola_dumerili
ENSEEUG00000000413	CRNKL1	91	84.513	ENSSLDG00000021413	crnkl1	87	84.398	Seriola_lalandi_dorsalis
ENSEEUG00000000413	CRNKL1	100	89.853	ENSSARG00000006443	CRNKL1	89	89.052	Sorex_araneus
ENSEEUG00000000413	CRNKL1	92	90.776	ENSSPUG00000005254	CRNKL1	99	90.708	Sphenodon_punctatus
ENSEEUG00000000413	CRNKL1	90	85.435	ENSSPAG00000016150	crnkl1	85	85.325	Stegastes_partitus
ENSEEUG00000000413	CRNKL1	92	96.215	ENSSSCG00000038587	CRNKL1	99	96.215	Sus_scrofa
ENSEEUG00000000413	CRNKL1	92	89.796	ENSTGUG00000007645	CRNKL1	98	89.721	Taeniopygia_guttata
ENSEEUG00000000413	CRNKL1	90	78.209	ENSTRUG00000015417	crnkl1	89	77.448	Takifugu_rubripes
ENSEEUG00000000413	CRNKL1	90	82.909	ENSTNIG00000010710	crnkl1	99	81.498	Tetraodon_nigroviridis
ENSEEUG00000000413	CRNKL1	90	90.193	ENSTBEG00000001304	CRNKL1	89	88.970	Tupaia_belangeri
ENSEEUG00000000413	CRNKL1	92	86.647	ENSTTRG00000000484	CRNKL1	88	86.647	Tursiops_truncatus
ENSEEUG00000000413	CRNKL1	92	96.507	ENSUAMG00000018586	CRNKL1	100	96.507	Ursus_americanus
ENSEEUG00000000413	CRNKL1	92	96.507	ENSUMAG00000024957	CRNKL1	100	96.507	Ursus_maritimus
ENSEEUG00000000413	CRNKL1	99	88.874	ENSVVUG00000012559	CRNKL1	90	89.934	Vulpes_vulpes
ENSEEUG00000000413	CRNKL1	92	88.064	ENSXETG00000009698	crnkl1	99	87.977	Xenopus_tropicalis
ENSEEUG00000000413	CRNKL1	90	83.208	ENSXCOG00000000824	crnkl1	91	81.416	Xiphophorus_couchianus
ENSEEUG00000000413	CRNKL1	90	84.234	ENSXMAG00000006896	crnkl1	91	82.422	Xiphophorus_maculatus