EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000000429 (Gene tree)
Gene ID: -
Gene Symbol: GFM1
Alias: EFGM|EGF1|GFM|mtEF-G1
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 49540 bases
Position: chrGeneScaffold_2797:799-50338
Accession: 13780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000000380	GTP_EFTU	PF00009.27	3.9e-33	1	2
ENSEEUP00000000380	GTP_EFTU	PF00009.27	3.9e-33	2	2
ENSEEUP00000000380	GTP_EFTU_D2	PF03144.25	9.9e-16	1	1
ENSEEUP00000000380	EFG_IV	PF03764.18	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000000430	GFM1-201	2181	-	ENSEEUP00000000380	726 (aa)	-	UPI0000F63073

Gene Model

Click here to download ENSEEUG00000000429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000000429's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000000429	GFM1	68	48.305	ENSEEUG00000004656	GFM2	65	48.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000000429	GFM1	99	68.276	ENSG00000168827	GFM1	96	68.276	Homo_sapiens
ENSEEUG00000000429	GFM1	92	57.824	ENSAPOG00000016489	gfm1	96	57.824	Acanthochromis_polyacanthus
ENSEEUG00000000429	GFM1	99	69.931	ENSAMEG00000013542	GFM1	96	69.931	Ailuropoda_melanoleuca
ENSEEUG00000000429	GFM1	99	60.139	ENSACIG00000014465	gfm1	93	60.139	Amphilophus_citrinellus
ENSEEUG00000000429	GFM1	98	59.301	ENSAOCG00000006023	gfm1	95	59.301	Amphiprion_ocellaris
ENSEEUG00000000429	GFM1	98	59.301	ENSAPEG00000024499	gfm1	92	65.748	Amphiprion_percula
ENSEEUG00000000429	GFM1	99	60.000	ENSATEG00000013789	gfm1	96	60.000	Anabas_testudineus
ENSEEUG00000000429	GFM1	99	60.858	ENSAPLG00000005022	GFM1	99	60.858	Anas_platyrhynchos
ENSEEUG00000000429	GFM1	99	61.806	ENSACAG00000006829	GFM1	97	61.806	Anolis_carolinensis
ENSEEUG00000000429	GFM1	99	68.138	ENSANAG00000035983	GFM1	96	68.138	Aotus_nancymaae
ENSEEUG00000000429	GFM1	99	60.833	ENSACLG00000016586	gfm1	98	59.336	Astatotilapia_calliptera
ENSEEUG00000000429	GFM1	99	60.139	ENSAMXG00000013435	gfm1	96	60.139	Astyanax_mexicanus
ENSEEUG00000000429	GFM1	99	70.345	ENSBTAG00000027795	GFM1	96	70.345	Bos_taurus
ENSEEUG00000000429	GFM1	88	48.687	WBGene00009246	gfm-1	87	48.687	Caenorhabditis_elegans
ENSEEUG00000000429	GFM1	99	68.690	ENSCJAG00000000363	GFM1	96	68.690	Callithrix_jacchus
ENSEEUG00000000429	GFM1	99	69.931	ENSCAFG00000009006	GFM1	96	69.931	Canis_familiaris
ENSEEUG00000000429	GFM1	99	70.028	ENSCAFG00020005878	GFM1	99	70.028	Canis_lupus_dingo
ENSEEUG00000000429	GFM1	99	70.345	ENSCHIG00000015220	GFM1	96	70.345	Capra_hircus
ENSEEUG00000000429	GFM1	99	69.379	ENSTSYG00000002013	GFM1	96	69.379	Carlito_syrichta
ENSEEUG00000000429	GFM1	99	70.580	ENSCAPG00000005699	GFM1	98	70.580	Cavia_aperea
ENSEEUG00000000429	GFM1	99	68.646	ENSCPOG00000001194	GFM1	96	68.646	Cavia_porcellus
ENSEEUG00000000429	GFM1	99	68.138	ENSCCAG00000025561	GFM1	96	68.138	Cebus_capucinus
ENSEEUG00000000429	GFM1	99	68.414	ENSCATG00000037622	GFM1	96	68.414	Cercocebus_atys
ENSEEUG00000000429	GFM1	99	68.094	ENSCLAG00000002503	GFM1	96	68.094	Chinchilla_lanigera
ENSEEUG00000000429	GFM1	99	68.414	ENSCSAG00000012162	GFM1	96	68.414	Chlorocebus_sabaeus
ENSEEUG00000000429	GFM1	87	74.847	ENSCHOG00000004867	GFM1	85	74.847	Choloepus_hoffmanni
ENSEEUG00000000429	GFM1	99	61.250	ENSCPBG00000018367	GFM1	96	61.250	Chrysemys_picta_bellii
ENSEEUG00000000429	GFM1	92	46.377	ENSCING00000011960	-	87	46.377	Ciona_intestinalis
ENSEEUG00000000429	GFM1	99	43.983	ENSCSAVG00000008514	-	99	43.983	Ciona_savignyi
ENSEEUG00000000429	GFM1	99	68.414	ENSCANG00000031714	GFM1	96	68.414	Colobus_angolensis_palliatus
ENSEEUG00000000429	GFM1	99	69.103	ENSCGRG00001022095	GFM1	96	69.103	Cricetulus_griseus_chok1gshd
ENSEEUG00000000429	GFM1	99	69.103	ENSCGRG00000012043	GFM1	96	69.103	Cricetulus_griseus_crigri
ENSEEUG00000000429	GFM1	99	55.972	ENSCSEG00000017088	gfm1	98	55.972	Cynoglossus_semilaevis
ENSEEUG00000000429	GFM1	98	61.399	ENSCVAG00000004126	gfm1	99	59.607	Cyprinodon_variegatus
ENSEEUG00000000429	GFM1	99	59.583	ENSDARG00000063624	gfm1	96	59.583	Danio_rerio
ENSEEUG00000000429	GFM1	57	72.993	ENSDNOG00000016385	-	100	72.993	Dasypus_novemcinctus
ENSEEUG00000000429	GFM1	99	67.448	ENSDORG00000014165	Gfm1	96	67.448	Dipodomys_ordii
ENSEEUG00000000429	GFM1	98	49.157	FBgn0263133	mEFG1	95	49.157	Drosophila_melanogaster
ENSEEUG00000000429	GFM1	77	89.005	ENSETEG00000019197	GFM1	74	89.005	Echinops_telfairi
ENSEEUG00000000429	GFM1	87	50.715	ENSEBUG00000012794	gfm1	93	50.715	Eptatretus_burgeri
ENSEEUG00000000429	GFM1	99	59.028	ENSELUG00000014728	gfm1	96	59.028	Esox_lucius
ENSEEUG00000000429	GFM1	99	69.931	ENSFCAG00000013291	GFM1	96	69.931	Felis_catus
ENSEEUG00000000429	GFM1	87	64.444	ENSFALG00000007619	GFM1	93	64.444	Ficedula_albicollis
ENSEEUG00000000429	GFM1	99	68.056	ENSFDAG00000016559	GFM1	95	68.056	Fukomys_damarensis
ENSEEUG00000000429	GFM1	99	60.278	ENSFHEG00000006091	gfm1	96	60.278	Fundulus_heteroclitus
ENSEEUG00000000429	GFM1	92	65.726	ENSGMOG00000010161	gfm1	91	65.726	Gadus_morhua
ENSEEUG00000000429	GFM1	100	60.331	ENSGALG00000009634	GFM1	98	60.331	Gallus_gallus
ENSEEUG00000000429	GFM1	99	60.833	ENSGAFG00000012527	gfm1	96	60.833	Gambusia_affinis
ENSEEUG00000000429	GFM1	99	58.971	ENSGACG00000009864	gfm1	96	58.971	Gasterosteus_aculeatus
ENSEEUG00000000429	GFM1	99	68.552	ENSGGOG00000003085	GFM1	96	68.552	Gorilla_gorilla
ENSEEUG00000000429	GFM1	99	61.111	ENSHBUG00000002120	gfm1	96	61.111	Haplochromis_burtoni
ENSEEUG00000000429	GFM1	99	68.276	ENSHGLG00000016855	GFM1	96	68.276	Heterocephalus_glaber_female
ENSEEUG00000000429	GFM1	99	68.276	ENSHGLG00100013049	GFM1	96	68.276	Heterocephalus_glaber_male
ENSEEUG00000000429	GFM1	98	60.140	ENSHCOG00000007638	gfm1	95	60.140	Hippocampus_comes
ENSEEUG00000000429	GFM1	99	60.000	ENSIPUG00000005873	gfm1	96	60.000	Ictalurus_punctatus
ENSEEUG00000000429	GFM1	99	67.862	ENSSTOG00000010150	GFM1	98	67.862	Ictidomys_tridecemlineatus
ENSEEUG00000000429	GFM1	99	68.276	ENSJJAG00000016447	Gfm1	96	68.276	Jaculus_jaculus
ENSEEUG00000000429	GFM1	99	59.583	ENSKMAG00000020768	gfm1	96	59.444	Kryptolebias_marmoratus
ENSEEUG00000000429	GFM1	97	60.085	ENSLBEG00000021315	gfm1	100	60.085	Labrus_bergylta
ENSEEUG00000000429	GFM1	99	60.833	ENSLACG00000012295	GFM1	97	60.833	Latimeria_chalumnae
ENSEEUG00000000429	GFM1	99	61.111	ENSLOCG00000003778	gfm1	99	61.111	Lepisosteus_oculatus
ENSEEUG00000000429	GFM1	100	66.529	ENSLAFG00000010945	GFM1	99	66.529	Loxodonta_africana
ENSEEUG00000000429	GFM1	99	68.690	ENSMFAG00000035731	GFM1	96	68.690	Macaca_fascicularis
ENSEEUG00000000429	GFM1	99	68.828	ENSMMUG00000004961	GFM1	96	68.828	Macaca_mulatta
ENSEEUG00000000429	GFM1	99	68.690	ENSMNEG00000033245	GFM1	96	68.690	Macaca_nemestrina
ENSEEUG00000000429	GFM1	99	67.034	ENSMLEG00000030908	GFM1	99	66.935	Mandrillus_leucophaeus
ENSEEUG00000000429	GFM1	99	60.278	ENSMAMG00000011760	gfm1	96	60.278	Mastacembelus_armatus
ENSEEUG00000000429	GFM1	99	60.972	ENSMZEG00005016639	gfm1	96	60.972	Maylandia_zebra
ENSEEUG00000000429	GFM1	100	60.055	ENSMGAG00000010641	GFM1	97	60.055	Meleagris_gallopavo
ENSEEUG00000000429	GFM1	99	69.241	ENSMAUG00000000611	Gfm1	96	69.241	Mesocricetus_auratus
ENSEEUG00000000429	GFM1	99	68.828	ENSMICG00000049086	GFM1	96	68.828	Microcebus_murinus
ENSEEUG00000000429	GFM1	99	68.690	ENSMOCG00000000465	Gfm1	96	68.690	Microtus_ochrogaster
ENSEEUG00000000429	GFM1	99	59.583	ENSMMOG00000012538	gfm1	97	59.583	Mola_mola
ENSEEUG00000000429	GFM1	99	64.779	ENSMODG00000015673	GFM1	97	64.779	Monodelphis_domestica
ENSEEUG00000000429	GFM1	90	66.532	ENSMALG00000012508	gfm1	88	66.532	Monopterus_albus
ENSEEUG00000000429	GFM1	99	68.552	MGP_CAROLIEiJ_G0025052	Gfm1	95	72.638	Mus_caroli
ENSEEUG00000000429	GFM1	99	68.414	ENSMUSG00000027774	Gfm1	96	68.414	Mus_musculus
ENSEEUG00000000429	GFM1	99	68.646	MGP_PahariEiJ_G0026495	Gfm1	94	72.781	Mus_pahari
ENSEEUG00000000429	GFM1	99	68.414	MGP_SPRETEiJ_G0025994	Gfm1	95	72.244	Mus_spretus
ENSEEUG00000000429	GFM1	99	69.379	ENSMPUG00000002859	GFM1	96	69.379	Mustela_putorius_furo
ENSEEUG00000000429	GFM1	99	69.241	ENSMLUG00000000452	GFM1	96	69.241	Myotis_lucifugus
ENSEEUG00000000429	GFM1	99	67.956	ENSNGAG00000012375	Gfm1	96	67.956	Nannospalax_galili
ENSEEUG00000000429	GFM1	99	60.833	ENSNBRG00000004631	gfm1	98	60.833	Neolamprologus_brichardi
ENSEEUG00000000429	GFM1	99	68.966	ENSNLEG00000004176	GFM1	96	68.966	Nomascus_leucogenys
ENSEEUG00000000429	GFM1	84	71.845	ENSMEUG00000007784	GFM1	89	71.845	Notamacropus_eugenii
ENSEEUG00000000429	GFM1	99	67.818	ENSOPRG00000009860	GFM1	97	67.818	Ochotona_princeps
ENSEEUG00000000429	GFM1	99	68.000	ENSODEG00000004316	GFM1	96	68.000	Octodon_degus
ENSEEUG00000000429	GFM1	99	61.250	ENSONIG00000003772	gfm1	96	61.250	Oreochromis_niloticus
ENSEEUG00000000429	GFM1	100	68.733	ENSOCUG00000013561	GFM1	96	68.733	Oryctolagus_cuniculus
ENSEEUG00000000429	GFM1	98	60.759	ENSORLG00000006487	gfm1	100	60.759	Oryzias_latipes
ENSEEUG00000000429	GFM1	99	61.111	ENSORLG00020003362	gfm1	96	61.111	Oryzias_latipes_hni
ENSEEUG00000000429	GFM1	99	60.083	ENSORLG00015005829	gfm1	96	60.083	Oryzias_latipes_hsok
ENSEEUG00000000429	GFM1	99	60.972	ENSOMEG00000012894	gfm1	96	60.972	Oryzias_melastigma
ENSEEUG00000000429	GFM1	99	67.448	ENSOGAG00000008298	GFM1	96	67.448	Otolemur_garnettii
ENSEEUG00000000429	GFM1	99	70.151	ENSOARG00000002409	GFM1	99	70.151	Ovis_aries
ENSEEUG00000000429	GFM1	99	68.552	ENSPPAG00000033881	GFM1	96	68.552	Pan_paniscus
ENSEEUG00000000429	GFM1	99	69.793	ENSPPRG00000009281	GFM1	96	69.793	Panthera_pardus
ENSEEUG00000000429	GFM1	99	69.793	ENSPTIG00000012416	GFM1	96	69.793	Panthera_tigris_altaica
ENSEEUG00000000429	GFM1	99	68.552	ENSPTRG00000015570	GFM1	96	68.552	Pan_troglodytes
ENSEEUG00000000429	GFM1	99	68.690	ENSPANG00000016512	GFM1	96	68.690	Papio_anubis
ENSEEUG00000000429	GFM1	99	60.249	ENSPKIG00000004876	gfm1	96	60.249	Paramormyrops_kingsleyae
ENSEEUG00000000429	GFM1	100	60.882	ENSPSIG00000012567	GFM1	97	60.882	Pelodiscus_sinensis
ENSEEUG00000000429	GFM1	99	58.530	ENSPMGG00000014068	gfm1	99	58.530	Periophthalmus_magnuspinnatus
ENSEEUG00000000429	GFM1	99	68.690	ENSPEMG00000008942	Gfm1	96	68.690	Peromyscus_maniculatus_bairdii
ENSEEUG00000000429	GFM1	77	71.825	ENSPCIG00000020195	GFM1	87	72.470	Phascolarctos_cinereus
ENSEEUG00000000429	GFM1	99	61.111	ENSPFOG00000011022	gfm1	96	61.111	Poecilia_formosa
ENSEEUG00000000429	GFM1	99	60.833	ENSPLAG00000019585	gfm1	95	60.833	Poecilia_latipinna
ENSEEUG00000000429	GFM1	99	61.111	ENSPMEG00000012376	gfm1	96	61.111	Poecilia_mexicana
ENSEEUG00000000429	GFM1	99	60.694	ENSPREG00000001332	gfm1	91	60.694	Poecilia_reticulata
ENSEEUG00000000429	GFM1	99	68.552	ENSPPYG00000014244	GFM1	96	68.552	Pongo_abelii
ENSEEUG00000000429	GFM1	97	64.965	ENSPCAG00000008934	GFM1	100	64.965	Procavia_capensis
ENSEEUG00000000429	GFM1	99	69.241	ENSPCOG00000022259	GFM1	96	69.241	Propithecus_coquereli
ENSEEUG00000000429	GFM1	99	69.793	ENSPVAG00000013605	GFM1	96	69.793	Pteropus_vampyrus
ENSEEUG00000000429	GFM1	99	60.694	ENSPNYG00000006037	gfm1	97	60.694	Pundamilia_nyererei
ENSEEUG00000000429	GFM1	99	60.000	ENSPNAG00000001237	gfm1	97	60.000	Pygocentrus_nattereri
ENSEEUG00000000429	GFM1	91	78.528	ENSRNOG00000012873	Gfm1	87	78.528	Rattus_norvegicus
ENSEEUG00000000429	GFM1	99	68.414	ENSRBIG00000031363	GFM1	96	68.414	Rhinopithecus_bieti
ENSEEUG00000000429	GFM1	99	68.552	ENSRROG00000031081	GFM1	96	68.552	Rhinopithecus_roxellana
ENSEEUG00000000429	GFM1	87	47.967	YLR069C	-	83	47.967	Saccharomyces_cerevisiae
ENSEEUG00000000429	GFM1	99	68.552	ENSSBOG00000023252	GFM1	96	68.552	Saimiri_boliviensis_boliviensis
ENSEEUG00000000429	GFM1	99	65.746	ENSSHAG00000017772	GFM1	96	65.746	Sarcophilus_harrisii
ENSEEUG00000000429	GFM1	91	72.393	ENSSFOG00015003117	gfm1	91	72.393	Scleropages_formosus
ENSEEUG00000000429	GFM1	99	58.611	ENSSMAG00000013221	gfm1	96	58.611	Scophthalmus_maximus
ENSEEUG00000000429	GFM1	99	59.583	ENSSDUG00000018665	gfm1	96	59.583	Seriola_dumerili
ENSEEUG00000000429	GFM1	99	59.444	ENSSLDG00000020606	gfm1	96	59.444	Seriola_lalandi_dorsalis
ENSEEUG00000000429	GFM1	99	60.972	ENSSPUG00000018686	GFM1	97	60.972	Sphenodon_punctatus
ENSEEUG00000000429	GFM1	99	59.722	ENSSPAG00000008800	gfm1	96	59.722	Stegastes_partitus
ENSEEUG00000000429	GFM1	99	69.793	ENSSSCG00000025651	GFM1	96	69.793	Sus_scrofa
ENSEEUG00000000429	GFM1	99	60.000	ENSTRUG00000009244	gfm1	96	60.000	Takifugu_rubripes
ENSEEUG00000000429	GFM1	99	60.694	ENSTNIG00000007729	gfm1	96	60.694	Tetraodon_nigroviridis
ENSEEUG00000000429	GFM1	73	93.458	ENSTBEG00000017404	GFM1	70	93.458	Tupaia_belangeri
ENSEEUG00000000429	GFM1	99	69.379	ENSTTRG00000001735	GFM1	95	69.379	Tursiops_truncatus
ENSEEUG00000000429	GFM1	99	69.793	ENSUAMG00000026381	GFM1	96	69.793	Ursus_americanus
ENSEEUG00000000429	GFM1	99	69.793	ENSUMAG00000011268	GFM1	96	69.793	Ursus_maritimus
ENSEEUG00000000429	GFM1	89	78.175	ENSVPAG00000009444	GFM1	85	78.175	Vicugna_pacos
ENSEEUG00000000429	GFM1	99	70.069	ENSVVUG00000020091	GFM1	99	69.848	Vulpes_vulpes
ENSEEUG00000000429	GFM1	99	64.722	ENSXETG00000032551	GFM1	95	64.722	Xenopus_tropicalis
ENSEEUG00000000429	GFM1	52	60.428	ENSXCOG00000012590	gfm1	86	60.428	Xiphophorus_couchianus
ENSEEUG00000000429	GFM1	99	60.972	ENSXMAG00000000261	gfm1	96	60.972	Xiphophorus_maculatus