EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000000676 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 151984 bases
Position: chrGeneScaffold_8581:18621-170604
Accession: 17264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000000598	RNA_pol_Rpb1_5	PF04998.17	2.6e-90	1	2
ENSEEUP00000000598	RNA_pol_Rpb1_5	PF04998.17	2.6e-90	2	2
ENSEEUP00000000598	RNA_pol_Rpb1_4	PF05000.17	1.6e-25	1	1
ENSEEUP00000000598	RNA_pol_Rpb1_2	PF00623.20	2.5e-70	1	1
ENSEEUP00000000598	RNA_pol_Rpb1_3	PF04983.18	4.1e-36	1	1
ENSEEUP00000000598	RNA_pol_Rpb1_1	PF04997.12	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000000678	POLR1A-201	5151	-	ENSEEUP00000000598	1716 (aa)	-	UPI0000F640AF

Gene Model

Click here to download ENSEEUG00000000676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000000676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000000676	POLR1A	59	38.889	ENSEEUG00000001154	-	60	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000000676	POLR1A	85	95.556	ENSG00000068654	POLR1A	81	95.745	Homo_sapiens
ENSEEUG00000000676	POLR1A	54	77.389	ENSAPOG00000017945	polr1a	79	77.389	Acanthochromis_polyacanthus
ENSEEUG00000000676	POLR1A	85	94.940	ENSAMEG00000005807	POLR1A	85	94.940	Ailuropoda_melanoleuca
ENSEEUG00000000676	POLR1A	79	76.744	ENSACIG00000022147	polr1a	82	76.744	Amphilophus_citrinellus
ENSEEUG00000000676	POLR1A	85	77.389	ENSAOCG00000017336	polr1a	86	77.389	Amphiprion_ocellaris
ENSEEUG00000000676	POLR1A	85	77.389	ENSAPEG00000016105	polr1a	85	77.389	Amphiprion_percula
ENSEEUG00000000676	POLR1A	80	84.252	ENSATEG00000016773	polr1a	85	76.653	Anabas_testudineus
ENSEEUG00000000676	POLR1A	70	85.714	ENSAPLG00000013871	POLR1A	82	85.714	Anas_platyrhynchos
ENSEEUG00000000676	POLR1A	80	80.315	ENSACAG00000012141	POLR1A	81	80.315	Anolis_carolinensis
ENSEEUG00000000676	POLR1A	85	92.410	ENSANAG00000033927	POLR1A	85	92.553	Aotus_nancymaae
ENSEEUG00000000676	POLR1A	78	76.364	ENSACLG00000020541	polr1a	83	76.364	Astatotilapia_calliptera
ENSEEUG00000000676	POLR1A	85	95.556	ENSBTAG00000006481	POLR1A	85	95.745	Bos_taurus
ENSEEUG00000000676	POLR1A	71	50.820	WBGene00012999	rpoa-1	77	55.435	Caenorhabditis_elegans
ENSEEUG00000000676	POLR1A	85	91.467	ENSCJAG00000019547	POLR1A	85	91.489	Callithrix_jacchus
ENSEEUG00000000676	POLR1A	85	95.556	ENSCAFG00000007613	POLR1A	85	95.745	Canis_familiaris
ENSEEUG00000000676	POLR1A	85	95.556	ENSCAFG00020014752	POLR1A	85	95.745	Canis_lupus_dingo
ENSEEUG00000000676	POLR1A	81	95.556	ENSCHIG00000018204	POLR1A	81	95.745	Capra_hircus
ENSEEUG00000000676	POLR1A	85	92.222	ENSTSYG00000002761	POLR1A	85	92.553	Carlito_syrichta
ENSEEUG00000000676	POLR1A	81	97.619	ENSCAPG00000010132	POLR1A	83	97.826	Cavia_aperea
ENSEEUG00000000676	POLR1A	85	93.333	ENSCPOG00000012350	POLR1A	85	93.617	Cavia_porcellus
ENSEEUG00000000676	POLR1A	85	92.410	ENSCCAG00000019839	POLR1A	85	92.553	Cebus_capucinus
ENSEEUG00000000676	POLR1A	81	94.444	ENSCATG00000029786	POLR1A	81	94.681	Cercocebus_atys
ENSEEUG00000000676	POLR1A	85	94.681	ENSCLAG00000005187	POLR1A	85	94.681	Chinchilla_lanigera
ENSEEUG00000000676	POLR1A	81	94.444	ENSCSAG00000016251	POLR1A	81	94.681	Chlorocebus_sabaeus
ENSEEUG00000000676	POLR1A	81	88.095	ENSCPBG00000001115	POLR1A	81	88.095	Chrysemys_picta_bellii
ENSEEUG00000000676	POLR1A	77	64.000	ENSCSAVG00000007184	-	78	64.000	Ciona_savignyi
ENSEEUG00000000676	POLR1A	81	95.556	ENSCANG00000031785	POLR1A	81	95.745	Colobus_angolensis_palliatus
ENSEEUG00000000676	POLR1A	85	96.667	ENSCGRG00001006651	Polr1a	85	96.809	Cricetulus_griseus_chok1gshd
ENSEEUG00000000676	POLR1A	52	92.126	ENSCGRG00000010834	Polr1a	86	92.126	Cricetulus_griseus_crigri
ENSEEUG00000000676	POLR1A	84	74.897	ENSCSEG00000020190	polr1a	84	74.897	Cynoglossus_semilaevis
ENSEEUG00000000676	POLR1A	79	81.102	ENSCVAG00000020941	polr1a	81	81.102	Cyprinodon_variegatus
ENSEEUG00000000676	POLR1A	84	79.400	ENSDARG00000098375	polr1a	84	79.400	Danio_rerio
ENSEEUG00000000676	POLR1A	84	92.222	ENSDNOG00000010829	POLR1A	85	92.553	Dasypus_novemcinctus
ENSEEUG00000000676	POLR1A	85	96.667	ENSDORG00000008298	Polr1a	85	96.809	Dipodomys_ordii
ENSEEUG00000000676	POLR1A	55	65.574	FBgn0019938	RpI1	74	65.574	Drosophila_melanogaster
ENSEEUG00000000676	POLR1A	62	96.875	ENSETEG00000000412	-	61	96.875	Echinops_telfairi
ENSEEUG00000000676	POLR1A	67	66.667	ENSEBUG00000005667	-	81	66.667	Eptatretus_burgeri
ENSEEUG00000000676	POLR1A	81	96.667	ENSEASG00005001625	POLR1A	85	96.809	Equus_asinus_asinus
ENSEEUG00000000676	POLR1A	85	96.809	ENSECAG00000030510	-	88	96.809	Equus_caballus
ENSEEUG00000000676	POLR1A	85	96.809	ENSECAG00000010092	POLR1A	88	96.809	Equus_caballus
ENSEEUG00000000676	POLR1A	85	96.667	ENSECAG00000036306	-	85	96.809	Equus_caballus
ENSEEUG00000000676	POLR1A	80	81.102	ENSELUG00000012769	polr1a	83	78.125	Esox_lucius
ENSEEUG00000000676	POLR1A	85	94.541	ENSFCAG00000008966	POLR1A	85	94.541	Felis_catus
ENSEEUG00000000676	POLR1A	84	80.537	ENSFALG00000010082	POLR1A	85	80.537	Ficedula_albicollis
ENSEEUG00000000676	POLR1A	85	94.444	ENSFDAG00000013726	POLR1A	85	94.681	Fukomys_damarensis
ENSEEUG00000000676	POLR1A	78	82.677	ENSFHEG00000005996	polr1a	80	82.677	Fundulus_heteroclitus
ENSEEUG00000000676	POLR1A	80	83.465	ENSGMOG00000002230	polr1a	85	83.465	Gadus_morhua
ENSEEUG00000000676	POLR1A	73	79.973	ENSGALG00000038160	-	81	79.973	Gallus_gallus
ENSEEUG00000000676	POLR1A	80	83.465	ENSGAFG00000015266	polr1a	83	83.465	Gambusia_affinis
ENSEEUG00000000676	POLR1A	80	81.102	ENSGACG00000018791	polr1a	80	81.102	Gasterosteus_aculeatus
ENSEEUG00000000676	POLR1A	75	87.302	ENSGAGG00000004984	-	84	87.302	Gopherus_agassizii
ENSEEUG00000000676	POLR1A	85	95.556	ENSGGOG00000001788	POLR1A	81	95.745	Gorilla_gorilla
ENSEEUG00000000676	POLR1A	67	87.097	ENSHBUG00000020021	polr1a	77	87.097	Haplochromis_burtoni
ENSEEUG00000000676	POLR1A	85	95.556	ENSHGLG00000006334	POLR1A	85	94.681	Heterocephalus_glaber_female
ENSEEUG00000000676	POLR1A	85	95.556	ENSHGLG00100006614	POLR1A	85	94.681	Heterocephalus_glaber_male
ENSEEUG00000000676	POLR1A	80	75.597	ENSHCOG00000003345	polr1a	84	75.597	Hippocampus_comes
ENSEEUG00000000676	POLR1A	84	78.718	ENSIPUG00000013174	polr1a	84	78.718	Ictalurus_punctatus
ENSEEUG00000000676	POLR1A	85	91.111	ENSSTOG00000012580	POLR1A	85	91.489	Ictidomys_tridecemlineatus
ENSEEUG00000000676	POLR1A	85	92.165	ENSJJAG00000013113	Polr1a	85	92.165	Jaculus_jaculus
ENSEEUG00000000676	POLR1A	85	76.280	ENSKMAG00000007399	polr1a	85	76.280	Kryptolebias_marmoratus
ENSEEUG00000000676	POLR1A	79	78.249	ENSLBEG00000015401	polr1a	84	77.328	Labrus_bergylta
ENSEEUG00000000676	POLR1A	85	80.081	ENSLOCG00000010881	polr1a	85	80.081	Lepisosteus_oculatus
ENSEEUG00000000676	POLR1A	85	96.667	ENSLAFG00000014948	POLR1A	85	96.809	Loxodonta_africana
ENSEEUG00000000676	POLR1A	81	94.444	ENSMFAG00000046097	POLR1A	81	94.681	Macaca_fascicularis
ENSEEUG00000000676	POLR1A	81	94.444	ENSMMUG00000015815	POLR1A	81	94.681	Macaca_mulatta
ENSEEUG00000000676	POLR1A	81	94.444	ENSMNEG00000043313	POLR1A	81	94.681	Macaca_nemestrina
ENSEEUG00000000676	POLR1A	81	94.444	ENSMLEG00000042428	POLR1A	81	94.681	Mandrillus_leucophaeus
ENSEEUG00000000676	POLR1A	84	77.899	ENSMAMG00000016565	polr1a	85	77.899	Mastacembelus_armatus
ENSEEUG00000000676	POLR1A	84	76.975	ENSMZEG00005004915	polr1a	85	76.975	Maylandia_zebra
ENSEEUG00000000676	POLR1A	81	84.921	ENSMGAG00000013111	POLR1A	81	84.921	Meleagris_gallopavo
ENSEEUG00000000676	POLR1A	80	93.076	ENSMAUG00000008497	Polr1a	87	93.076	Mesocricetus_auratus
ENSEEUG00000000676	POLR1A	85	95.556	ENSMICG00000000757	POLR1A	85	95.745	Microcebus_murinus
ENSEEUG00000000676	POLR1A	85	95.556	ENSMOCG00000000122	Polr1a	85	95.745	Microtus_ochrogaster
ENSEEUG00000000676	POLR1A	83	78.754	ENSMMOG00000010216	polr1a	85	78.754	Mola_mola
ENSEEUG00000000676	POLR1A	81	92.126	ENSMODG00000009335	POLR1A	73	92.126	Monodelphis_domestica
ENSEEUG00000000676	POLR1A	84	77.428	ENSMALG00000013363	polr1a	85	76.725	Monopterus_albus
ENSEEUG00000000676	POLR1A	85	92.553	MGP_CAROLIEiJ_G0028494	Polr1a	85	92.553	Mus_caroli
ENSEEUG00000000676	POLR1A	85	91.489	ENSMUSG00000049553	Polr1a	85	91.489	Mus_musculus
ENSEEUG00000000676	POLR1A	85	93.333	MGP_PahariEiJ_G0022230	Polr1a	85	93.617	Mus_pahari
ENSEEUG00000000676	POLR1A	85	91.489	MGP_SPRETEiJ_G0029499	Polr1a	85	91.489	Mus_spretus
ENSEEUG00000000676	POLR1A	85	95.556	ENSMPUG00000009135	POLR1A	85	95.745	Mustela_putorius_furo
ENSEEUG00000000676	POLR1A	85	96.667	ENSMLUG00000015723	POLR1A	85	96.809	Myotis_lucifugus
ENSEEUG00000000676	POLR1A	85	93.333	ENSNGAG00000017907	Polr1a	85	93.617	Nannospalax_galili
ENSEEUG00000000676	POLR1A	84	76.975	ENSNBRG00000000519	polr1a	85	76.975	Neolamprologus_brichardi
ENSEEUG00000000676	POLR1A	81	95.556	ENSNLEG00000002264	POLR1A	81	95.745	Nomascus_leucogenys
ENSEEUG00000000676	POLR1A	61	94.545	ENSMEUG00000011665	-	61	94.545	Notamacropus_eugenii
ENSEEUG00000000676	POLR1A	84	93.617	ENSOPRG00000008269	POLR1A	85	93.617	Ochotona_princeps
ENSEEUG00000000676	POLR1A	85	92.810	ENSODEG00000003542	POLR1A	85	92.810	Octodon_degus
ENSEEUG00000000676	POLR1A	85	76.851	ENSONIG00000015895	polr1a	85	76.851	Oreochromis_niloticus
ENSEEUG00000000676	POLR1A	85	95.556	ENSOCUG00000010138	POLR1A	85	95.745	Oryctolagus_cuniculus
ENSEEUG00000000676	POLR1A	85	76.210	ENSORLG00000008753	polr1a	85	76.210	Oryzias_latipes
ENSEEUG00000000676	POLR1A	85	76.344	ENSORLG00020020726	polr1a	86	76.344	Oryzias_latipes_hni
ENSEEUG00000000676	POLR1A	82	76.078	ENSORLG00015016071	polr1a	86	76.078	Oryzias_latipes_hsok
ENSEEUG00000000676	POLR1A	81	96.667	ENSOGAG00000004031	POLR1A	81	96.809	Otolemur_garnettii
ENSEEUG00000000676	POLR1A	85	95.556	ENSOARG00000020601	POLR1A	85	95.745	Ovis_aries
ENSEEUG00000000676	POLR1A	85	95.556	ENSPPAG00000042450	POLR1A	85	95.745	Pan_paniscus
ENSEEUG00000000676	POLR1A	85	94.407	ENSPPRG00000006702	POLR1A	85	94.407	Panthera_pardus
ENSEEUG00000000676	POLR1A	85	93.263	ENSPTIG00000018783	POLR1A	85	93.263	Panthera_tigris_altaica
ENSEEUG00000000676	POLR1A	85	95.556	ENSPTRG00000012147	POLR1A	81	95.745	Pan_troglodytes
ENSEEUG00000000676	POLR1A	81	94.444	ENSPANG00000025908	POLR1A	81	94.681	Papio_anubis
ENSEEUG00000000676	POLR1A	85	77.389	ENSPKIG00000005468	polr1a	85	77.389	Paramormyrops_kingsleyae
ENSEEUG00000000676	POLR1A	55	87.302	ENSPSIG00000009321	-	86	87.302	Pelodiscus_sinensis
ENSEEUG00000000676	POLR1A	85	95.556	ENSPEMG00000022224	Polr1a	85	95.745	Peromyscus_maniculatus_bairdii
ENSEEUG00000000676	POLR1A	76	87.500	ENSPCIG00000004222	POLR1A	79	87.500	Phascolarctos_cinereus
ENSEEUG00000000676	POLR1A	84	76.881	ENSPFOG00000005025	polr1a	84	76.671	Poecilia_formosa
ENSEEUG00000000676	POLR1A	84	77.018	ENSPLAG00000021389	polr1a	84	76.808	Poecilia_latipinna
ENSEEUG00000000676	POLR1A	82	75.951	ENSPMEG00000006463	polr1a	84	75.745	Poecilia_mexicana
ENSEEUG00000000676	POLR1A	79	85.039	ENSPREG00000002389	polr1a	82	85.039	Poecilia_reticulata
ENSEEUG00000000676	POLR1A	85	94.444	ENSPPYG00000012217	POLR1A	81	94.681	Pongo_abelii
ENSEEUG00000000676	POLR1A	72	96.000	ENSPCAG00000011582	POLR1A	72	96.000	Procavia_capensis
ENSEEUG00000000676	POLR1A	85	95.556	ENSPCOG00000026987	POLR1A	85	95.745	Propithecus_coquereli
ENSEEUG00000000676	POLR1A	85	95.556	ENSPVAG00000012674	POLR1A	85	95.745	Pteropus_vampyrus
ENSEEUG00000000676	POLR1A	84	76.975	ENSPNYG00000000026	polr1a	85	76.975	Pundamilia_nyererei
ENSEEUG00000000676	POLR1A	85	77.837	ENSPNAG00000019223	polr1a	85	77.837	Pygocentrus_nattereri
ENSEEUG00000000676	POLR1A	85	93.333	ENSRNOG00000009545	Polr1a	85	93.617	Rattus_norvegicus
ENSEEUG00000000676	POLR1A	81	94.444	ENSRBIG00000028335	POLR1A	81	94.681	Rhinopithecus_bieti
ENSEEUG00000000676	POLR1A	81	94.444	ENSRROG00000031473	POLR1A	85	92.913	Rhinopithecus_roxellana
ENSEEUG00000000676	POLR1A	72	51.807	YOR341W	RPA190	72	51.807	Saccharomyces_cerevisiae
ENSEEUG00000000676	POLR1A	85	92.543	ENSSBOG00000030262	POLR1A	85	92.553	Saimiri_boliviensis_boliviensis
ENSEEUG00000000676	POLR1A	81	90.551	ENSSHAG00000014739	POLR1A	81	90.551	Sarcophilus_harrisii
ENSEEUG00000000676	POLR1A	84	79.724	ENSSFOG00015019716	polr1a	84	79.724	Scleropages_formosus
ENSEEUG00000000676	POLR1A	85	76.622	ENSSMAG00000014342	polr1a	86	76.622	Scophthalmus_maximus
ENSEEUG00000000676	POLR1A	84	78.035	ENSSDUG00000014631	polr1a	85	77.328	Seriola_dumerili
ENSEEUG00000000676	POLR1A	79	78.035	ENSSLDG00000024095	polr1a	83	78.035	Seriola_lalandi_dorsalis
ENSEEUG00000000676	POLR1A	55	97.561	ENSSARG00000003136	-	56	97.561	Sorex_araneus
ENSEEUG00000000676	POLR1A	81	82.282	ENSSPUG00000004215	POLR1A	81	82.282	Sphenodon_punctatus
ENSEEUG00000000676	POLR1A	68	93.333	ENSSSCG00000008226	POLR1A	82	93.617	Sus_scrofa
ENSEEUG00000000676	POLR1A	83	80.295	ENSTGUG00000010704	POLR1A	84	80.295	Taeniopygia_guttata
ENSEEUG00000000676	POLR1A	85	73.762	ENSTRUG00000002210	polr1a	86	73.762	Takifugu_rubripes
ENSEEUG00000000676	POLR1A	80	81.102	ENSTNIG00000010116	polr1a	81	81.102	Tetraodon_nigroviridis
ENSEEUG00000000676	POLR1A	59	95.575	ENSTBEG00000008646	POLR1A	60	95.575	Tupaia_belangeri
ENSEEUG00000000676	POLR1A	85	97.778	ENSTTRG00000008597	POLR1A	85	96.809	Tursiops_truncatus
ENSEEUG00000000676	POLR1A	64	95.312	ENSUAMG00000012158	-	88	95.312	Ursus_americanus
ENSEEUG00000000676	POLR1A	85	96.667	ENSUMAG00000006700	POLR1A	87	96.809	Ursus_maritimus
ENSEEUG00000000676	POLR1A	85	95.556	ENSVVUG00000001245	POLR1A	85	95.745	Vulpes_vulpes
ENSEEUG00000000676	POLR1A	84	79.787	ENSXETG00000001952	polr1a	81	79.787	Xenopus_tropicalis
ENSEEUG00000000676	POLR1A	84	76.744	ENSXMAG00000004032	polr1a	85	76.744	Xiphophorus_maculatus