EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000000836 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 101332 bases
Position: chrGeneScaffold_2556:10286-111617
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000000745	SF3b1	PF08920.10	1.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000000836	SF3B1-201	3900	-	ENSEEUP00000000745	1299 (aa)	-	UPI0000F63435

Gene Model

Click here to download ENSEEUG00000000836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000000836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000000836	SF3B1	81	100.000	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSEEUG00000000836	SF3B1	81	100.000	ENSAPOG00000011894	sf3b1	87	100.000	Acanthochromis_polyacanthus
ENSEEUG00000000836	SF3B1	81	100.000	ENSAMEG00000013809	SF3B1	86	100.000	Ailuropoda_melanoleuca
ENSEEUG00000000836	SF3B1	81	100.000	ENSACIG00000020910	sf3b1	79	100.000	Amphilophus_citrinellus
ENSEEUG00000000836	SF3B1	81	100.000	ENSAOCG00000004478	sf3b1	87	100.000	Amphiprion_ocellaris
ENSEEUG00000000836	SF3B1	81	100.000	ENSAPEG00000012937	sf3b1	87	100.000	Amphiprion_percula
ENSEEUG00000000836	SF3B1	81	100.000	ENSATEG00000020435	sf3b1	87	100.000	Anabas_testudineus
ENSEEUG00000000836	SF3B1	81	100.000	ENSAPLG00000003993	SF3B1	86	100.000	Anas_platyrhynchos
ENSEEUG00000000836	SF3B1	81	100.000	ENSACAG00000009612	SF3B1	87	100.000	Anolis_carolinensis
ENSEEUG00000000836	SF3B1	81	100.000	ENSANAG00000021577	SF3B1	87	100.000	Aotus_nancymaae
ENSEEUG00000000836	SF3B1	81	100.000	ENSACLG00000023470	sf3b1	81	100.000	Astatotilapia_calliptera
ENSEEUG00000000836	SF3B1	81	100.000	ENSAMXG00000002219	sf3b1	87	100.000	Astyanax_mexicanus
ENSEEUG00000000836	SF3B1	81	100.000	ENSBTAG00000008915	SF3B1	87	100.000	Bos_taurus
ENSEEUG00000000836	SF3B1	73	88.688	WBGene00011605	sftb-1	75	88.688	Caenorhabditis_elegans
ENSEEUG00000000836	SF3B1	81	100.000	ENSCJAG00000003902	SF3B1	87	100.000	Callithrix_jacchus
ENSEEUG00000000836	SF3B1	81	100.000	ENSCAFG00000010826	SF3B1	87	100.000	Canis_familiaris
ENSEEUG00000000836	SF3B1	81	100.000	ENSCAFG00020004750	SF3B1	87	100.000	Canis_lupus_dingo
ENSEEUG00000000836	SF3B1	81	100.000	ENSCHIG00000015226	SF3B1	87	100.000	Capra_hircus
ENSEEUG00000000836	SF3B1	81	100.000	ENSTSYG00000009214	SF3B1	87	100.000	Carlito_syrichta
ENSEEUG00000000836	SF3B1	81	100.000	ENSCAPG00000006547	SF3B1	86	100.000	Cavia_aperea
ENSEEUG00000000836	SF3B1	81	100.000	ENSCPOG00000009353	SF3B1	87	100.000	Cavia_porcellus
ENSEEUG00000000836	SF3B1	81	100.000	ENSCCAG00000020506	SF3B1	90	100.000	Cebus_capucinus
ENSEEUG00000000836	SF3B1	81	100.000	ENSCATG00000035735	SF3B1	87	100.000	Cercocebus_atys
ENSEEUG00000000836	SF3B1	81	100.000	ENSCLAG00000014767	SF3B1	86	100.000	Chinchilla_lanigera
ENSEEUG00000000836	SF3B1	81	100.000	ENSCSAG00000011505	SF3B1	87	100.000	Chlorocebus_sabaeus
ENSEEUG00000000836	SF3B1	63	98.462	ENSCHOG00000009860	SF3B1	63	98.462	Choloepus_hoffmanni
ENSEEUG00000000836	SF3B1	81	100.000	ENSCPBG00000021902	SF3B1	90	100.000	Chrysemys_picta_bellii
ENSEEUG00000000836	SF3B1	55	86.992	ENSCING00000002558	-	80	86.992	Ciona_intestinalis
ENSEEUG00000000836	SF3B1	81	92.219	ENSCSAVG00000002559	-	87	92.219	Ciona_savignyi
ENSEEUG00000000836	SF3B1	81	100.000	ENSCANG00000029415	SF3B1	87	100.000	Colobus_angolensis_palliatus
ENSEEUG00000000836	SF3B1	81	100.000	ENSCGRG00001016990	Sf3b1	87	100.000	Cricetulus_griseus_chok1gshd
ENSEEUG00000000836	SF3B1	81	100.000	ENSCGRG00000005301	Sf3b1	87	100.000	Cricetulus_griseus_crigri
ENSEEUG00000000836	SF3B1	81	100.000	ENSCSEG00000003860	sf3b1	88	100.000	Cynoglossus_semilaevis
ENSEEUG00000000836	SF3B1	77	100.000	ENSCVAG00000003680	sf3b1	86	100.000	Cyprinodon_variegatus
ENSEEUG00000000836	SF3B1	81	100.000	ENSDARG00000056138	sf3b1	87	100.000	Danio_rerio
ENSEEUG00000000836	SF3B1	81	100.000	ENSDNOG00000011754	SF3B1	87	100.000	Dasypus_novemcinctus
ENSEEUG00000000836	SF3B1	81	100.000	ENSDORG00000002399	Sf3b1	86	100.000	Dipodomys_ordii
ENSEEUG00000000836	SF3B1	76	96.380	FBgn0031266	Sf3b1	74	96.380	Drosophila_melanogaster
ENSEEUG00000000836	SF3B1	70	98.828	ENSETEG00000009188	SF3B1	91	98.828	Echinops_telfairi
ENSEEUG00000000836	SF3B1	81	98.271	ENSEBUG00000004325	sf3b1	80	98.271	Eptatretus_burgeri
ENSEEUG00000000836	SF3B1	81	100.000	ENSEASG00005020159	SF3B1	85	100.000	Equus_asinus_asinus
ENSEEUG00000000836	SF3B1	81	100.000	ENSECAG00000021657	SF3B1	85	100.000	Equus_caballus
ENSEEUG00000000836	SF3B1	81	100.000	ENSELUG00000005977	sf3b1	85	100.000	Esox_lucius
ENSEEUG00000000836	SF3B1	81	100.000	ENSFCAG00000005038	SF3B1	87	100.000	Felis_catus
ENSEEUG00000000836	SF3B1	81	100.000	ENSFALG00000004281	SF3B1	86	100.000	Ficedula_albicollis
ENSEEUG00000000836	SF3B1	81	100.000	ENSFDAG00000017510	SF3B1	87	100.000	Fukomys_damarensis
ENSEEUG00000000836	SF3B1	81	100.000	ENSFHEG00000014333	sf3b1	87	100.000	Fundulus_heteroclitus
ENSEEUG00000000836	SF3B1	81	100.000	ENSGMOG00000006773	sf3b1	87	100.000	Gadus_morhua
ENSEEUG00000000836	SF3B1	81	100.000	ENSGALG00000008038	SF3B1	87	100.000	Gallus_gallus
ENSEEUG00000000836	SF3B1	81	100.000	ENSGAFG00000000704	sf3b1	87	100.000	Gambusia_affinis
ENSEEUG00000000836	SF3B1	81	100.000	ENSGACG00000008839	sf3b1	87	100.000	Gasterosteus_aculeatus
ENSEEUG00000000836	SF3B1	81	100.000	ENSGAGG00000017478	SF3B1	87	100.000	Gopherus_agassizii
ENSEEUG00000000836	SF3B1	81	100.000	ENSGGOG00000009264	SF3B1	84	100.000	Gorilla_gorilla
ENSEEUG00000000836	SF3B1	81	100.000	ENSHBUG00000007705	sf3b1	81	100.000	Haplochromis_burtoni
ENSEEUG00000000836	SF3B1	81	100.000	ENSHGLG00000008285	-	86	100.000	Heterocephalus_glaber_female
ENSEEUG00000000836	SF3B1	81	100.000	ENSHGLG00100005535	-	88	100.000	Heterocephalus_glaber_male
ENSEEUG00000000836	SF3B1	81	100.000	ENSHCOG00000016775	sf3b1	87	100.000	Hippocampus_comes
ENSEEUG00000000836	SF3B1	81	100.000	ENSIPUG00000013171	sf3b1	87	100.000	Ictalurus_punctatus
ENSEEUG00000000836	SF3B1	81	100.000	ENSSTOG00000011034	SF3B1	87	100.000	Ictidomys_tridecemlineatus
ENSEEUG00000000836	SF3B1	80	100.000	ENSJJAG00000010903	Sf3b1	86	100.000	Jaculus_jaculus
ENSEEUG00000000836	SF3B1	81	100.000	ENSKMAG00000004009	sf3b1	87	100.000	Kryptolebias_marmoratus
ENSEEUG00000000836	SF3B1	81	100.000	ENSLBEG00000022208	sf3b1	87	100.000	Labrus_bergylta
ENSEEUG00000000836	SF3B1	81	99.713	ENSLACG00000014832	SF3B1	87	99.713	Latimeria_chalumnae
ENSEEUG00000000836	SF3B1	81	100.000	ENSLOCG00000003899	sf3b1	87	100.000	Lepisosteus_oculatus
ENSEEUG00000000836	SF3B1	81	100.000	ENSLAFG00000001956	SF3B1	87	100.000	Loxodonta_africana
ENSEEUG00000000836	SF3B1	81	100.000	ENSMMUG00000022430	SF3B1	86	100.000	Macaca_mulatta
ENSEEUG00000000836	SF3B1	81	100.000	ENSMNEG00000042333	SF3B1	87	100.000	Macaca_nemestrina
ENSEEUG00000000836	SF3B1	75	100.000	ENSMLEG00000026141	SF3B1	82	100.000	Mandrillus_leucophaeus
ENSEEUG00000000836	SF3B1	81	100.000	ENSMAMG00000010241	sf3b1	87	100.000	Mastacembelus_armatus
ENSEEUG00000000836	SF3B1	81	100.000	ENSMZEG00005021254	sf3b1	81	100.000	Maylandia_zebra
ENSEEUG00000000836	SF3B1	81	100.000	ENSMGAG00000007017	SF3B1	86	100.000	Meleagris_gallopavo
ENSEEUG00000000836	SF3B1	81	100.000	ENSMAUG00000009071	Sf3b1	86	100.000	Mesocricetus_auratus
ENSEEUG00000000836	SF3B1	81	100.000	ENSMICG00000013879	SF3B1	87	100.000	Microcebus_murinus
ENSEEUG00000000836	SF3B1	72	100.000	ENSMOCG00000000455	Sf3b1	80	100.000	Microtus_ochrogaster
ENSEEUG00000000836	SF3B1	70	100.000	ENSMMOG00000000475	sf3b1	91	100.000	Mola_mola
ENSEEUG00000000836	SF3B1	81	100.000	ENSMODG00000012275	SF3B1	87	100.000	Monodelphis_domestica
ENSEEUG00000000836	SF3B1	81	100.000	ENSMALG00000017211	sf3b1	87	100.000	Monopterus_albus
ENSEEUG00000000836	SF3B1	81	100.000	MGP_CAROLIEiJ_G0014141	Sf3b1	87	100.000	Mus_caroli
ENSEEUG00000000836	SF3B1	81	100.000	ENSMUSG00000025982	Sf3b1	87	100.000	Mus_musculus
ENSEEUG00000000836	SF3B1	81	100.000	MGP_SPRETEiJ_G0014947	Sf3b1	87	100.000	Mus_spretus
ENSEEUG00000000836	SF3B1	81	100.000	ENSMPUG00000007799	SF3B1	87	100.000	Mustela_putorius_furo
ENSEEUG00000000836	SF3B1	81	100.000	ENSMLUG00000000840	SF3B1	87	100.000	Myotis_lucifugus
ENSEEUG00000000836	SF3B1	81	100.000	ENSNGAG00000021884	-	87	100.000	Nannospalax_galili
ENSEEUG00000000836	SF3B1	81	100.000	ENSNBRG00000015816	sf3b1	81	100.000	Neolamprologus_brichardi
ENSEEUG00000000836	SF3B1	81	100.000	ENSNLEG00000006861	SF3B1	87	100.000	Nomascus_leucogenys
ENSEEUG00000000836	SF3B1	81	100.000	ENSOPRG00000008596	SF3B1	85	100.000	Ochotona_princeps
ENSEEUG00000000836	SF3B1	81	100.000	ENSODEG00000011153	-	87	100.000	Octodon_degus
ENSEEUG00000000836	SF3B1	81	100.000	ENSONIG00000013758	sf3b1	81	100.000	Oreochromis_niloticus
ENSEEUG00000000836	SF3B1	67	100.000	ENSOCUG00000012722	-	81	100.000	Oryctolagus_cuniculus
ENSEEUG00000000836	SF3B1	81	100.000	ENSORLG00000020219	sf3b1	87	100.000	Oryzias_latipes
ENSEEUG00000000836	SF3B1	81	100.000	ENSORLG00020001746	sf3b1	87	100.000	Oryzias_latipes_hni
ENSEEUG00000000836	SF3B1	51	80.886	ENSORLG00015001759	sf3b1	78	80.886	Oryzias_latipes_hsok
ENSEEUG00000000836	SF3B1	81	100.000	ENSOMEG00000019231	sf3b1	87	100.000	Oryzias_melastigma
ENSEEUG00000000836	SF3B1	81	100.000	ENSOARG00000015374	SF3B1	87	100.000	Ovis_aries
ENSEEUG00000000836	SF3B1	81	100.000	ENSPPAG00000035007	SF3B1	87	100.000	Pan_paniscus
ENSEEUG00000000836	SF3B1	81	100.000	ENSPPRG00000009090	SF3B1	87	100.000	Panthera_pardus
ENSEEUG00000000836	SF3B1	81	100.000	ENSPTIG00000021557	SF3B1	87	100.000	Panthera_tigris_altaica
ENSEEUG00000000836	SF3B1	80	100.000	ENSPTRG00000012771	SF3B1	81	100.000	Pan_troglodytes
ENSEEUG00000000836	SF3B1	81	100.000	ENSPANG00000013417	SF3B1	87	100.000	Papio_anubis
ENSEEUG00000000836	SF3B1	81	99.712	ENSPKIG00000000784	sf3b1	87	99.712	Paramormyrops_kingsleyae
ENSEEUG00000000836	SF3B1	80	100.000	ENSPSIG00000017222	SF3B1	85	100.000	Pelodiscus_sinensis
ENSEEUG00000000836	SF3B1	77	99.712	ENSPMGG00000004330	sf3b1	91	99.712	Periophthalmus_magnuspinnatus
ENSEEUG00000000836	SF3B1	81	100.000	ENSPEMG00000010699	Sf3b1	87	100.000	Peromyscus_maniculatus_bairdii
ENSEEUG00000000836	SF3B1	81	98.559	ENSPMAG00000001311	sf3b1	87	98.559	Petromyzon_marinus
ENSEEUG00000000836	SF3B1	81	100.000	ENSPCIG00000010642	SF3B1	89	98.077	Phascolarctos_cinereus
ENSEEUG00000000836	SF3B1	81	100.000	ENSPFOG00000000073	sf3b1	87	100.000	Poecilia_formosa
ENSEEUG00000000836	SF3B1	81	100.000	ENSPLAG00000002293	sf3b1	87	100.000	Poecilia_latipinna
ENSEEUG00000000836	SF3B1	81	100.000	ENSPMEG00000000446	sf3b1	85	100.000	Poecilia_mexicana
ENSEEUG00000000836	SF3B1	81	100.000	ENSPREG00000019652	sf3b1	87	100.000	Poecilia_reticulata
ENSEEUG00000000836	SF3B1	81	100.000	ENSPPYG00000013044	SF3B1	85	100.000	Pongo_abelii
ENSEEUG00000000836	SF3B1	81	100.000	ENSPCAG00000009292	SF3B1	87	100.000	Procavia_capensis
ENSEEUG00000000836	SF3B1	81	100.000	ENSPCOG00000024074	SF3B1	87	100.000	Propithecus_coquereli
ENSEEUG00000000836	SF3B1	81	100.000	ENSPVAG00000008302	SF3B1	87	100.000	Pteropus_vampyrus
ENSEEUG00000000836	SF3B1	81	100.000	ENSPNYG00000014939	sf3b1	81	100.000	Pundamilia_nyererei
ENSEEUG00000000836	SF3B1	81	100.000	ENSPNAG00000008288	sf3b1	87	100.000	Pygocentrus_nattereri
ENSEEUG00000000836	SF3B1	81	100.000	ENSRNOG00000013516	Sf3b1	87	100.000	Rattus_norvegicus
ENSEEUG00000000836	SF3B1	76	100.000	ENSRBIG00000026096	SF3B1	84	100.000	Rhinopithecus_bieti
ENSEEUG00000000836	SF3B1	81	100.000	ENSRROG00000031308	SF3B1	87	100.000	Rhinopithecus_roxellana
ENSEEUG00000000836	SF3B1	81	100.000	ENSSBOG00000020080	SF3B1	87	100.000	Saimiri_boliviensis_boliviensis
ENSEEUG00000000836	SF3B1	81	100.000	ENSSHAG00000017564	SF3B1	87	100.000	Sarcophilus_harrisii
ENSEEUG00000000836	SF3B1	81	99.712	ENSSFOG00015021535	sf3b1	87	99.712	Scleropages_formosus
ENSEEUG00000000836	SF3B1	81	100.000	ENSSMAG00000013977	sf3b1	86	100.000	Scophthalmus_maximus
ENSEEUG00000000836	SF3B1	81	100.000	ENSSDUG00000017422	sf3b1	87	100.000	Seriola_dumerili
ENSEEUG00000000836	SF3B1	81	100.000	ENSSLDG00000019495	sf3b1	87	100.000	Seriola_lalandi_dorsalis
ENSEEUG00000000836	SF3B1	54	100.000	ENSSARG00000007016	SF3B1	54	100.000	Sorex_araneus
ENSEEUG00000000836	SF3B1	81	99.712	ENSSPUG00000000410	SF3B1	81	99.712	Sphenodon_punctatus
ENSEEUG00000000836	SF3B1	81	100.000	ENSSPAG00000010451	sf3b1	86	100.000	Stegastes_partitus
ENSEEUG00000000836	SF3B1	77	100.000	ENSSSCG00000016075	SF3B1	91	100.000	Sus_scrofa
ENSEEUG00000000836	SF3B1	81	100.000	ENSTGUG00000010553	SF3B1	87	100.000	Taeniopygia_guttata
ENSEEUG00000000836	SF3B1	81	100.000	ENSTRUG00000015534	sf3b1	87	100.000	Takifugu_rubripes
ENSEEUG00000000836	SF3B1	74	100.000	ENSTBEG00000008714	SF3B1	84	100.000	Tupaia_belangeri
ENSEEUG00000000836	SF3B1	74	100.000	ENSTTRG00000003414	SF3B1	79	100.000	Tursiops_truncatus
ENSEEUG00000000836	SF3B1	72	100.000	ENSUAMG00000018506	SF3B1	88	100.000	Ursus_americanus
ENSEEUG00000000836	SF3B1	81	100.000	ENSUMAG00000020945	SF3B1	87	100.000	Ursus_maritimus
ENSEEUG00000000836	SF3B1	81	100.000	ENSVPAG00000005798	SF3B1	81	100.000	Vicugna_pacos
ENSEEUG00000000836	SF3B1	81	100.000	ENSVVUG00000025948	SF3B1	82	100.000	Vulpes_vulpes
ENSEEUG00000000836	SF3B1	81	100.000	ENSXETG00000013339	sf3b1	87	100.000	Xenopus_tropicalis
ENSEEUG00000000836	SF3B1	81	100.000	ENSXCOG00000018086	sf3b1	81	100.000	Xiphophorus_couchianus
ENSEEUG00000000836	SF3B1	81	100.000	ENSXMAG00000007369	sf3b1	87	100.000	Xiphophorus_maculatus