EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000001058 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 6256 bases
Position: chrGeneScaffold_641:42907-49162
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000000946	KH_1	PF00013.29	6.4e-08	1	1
ENSEEUP00000000946	zf-CCHC	PF00098.23	4.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000001057	SF1-201	1179	-	ENSEEUP00000000946	393 (aa)	-	UPI0000F627B8

Gene Model

Click here to download ENSEEUG00000001058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000001058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000001058	SF1	83	82.635	ENSAPOG00000012341	sf1	53	77.005	Acanthochromis_polyacanthus
ENSEEUG00000001058	SF1	100	99.237	ENSAMEG00000017828	SF1	61	99.237	Ailuropoda_melanoleuca
ENSEEUG00000001058	SF1	83	85.015	ENSACIG00000016514	sf1	55	78.202	Amphilophus_citrinellus
ENSEEUG00000001058	SF1	83	81.737	ENSAOCG00000010934	sf1	53	77.273	Amphiprion_ocellaris
ENSEEUG00000001058	SF1	83	81.737	ENSAPEG00000009498	sf1	53	77.273	Amphiprion_percula
ENSEEUG00000001058	SF1	83	82.335	ENSATEG00000001894	sf1	53	78.075	Anabas_testudineus
ENSEEUG00000001058	SF1	100	98.982	ENSANAG00000026664	-	83	98.867	Aotus_nancymaae
ENSEEUG00000001058	SF1	98	91.731	ENSANAG00000022607	-	81	91.925	Aotus_nancymaae
ENSEEUG00000001058	SF1	83	84.802	ENSACLG00000007633	sf1	55	78.976	Astatotilapia_calliptera
ENSEEUG00000001058	SF1	100	99.237	ENSBTAG00000001035	SF1	65	99.237	Bos_taurus
ENSEEUG00000001058	SF1	100	99.237	ENSCJAG00000002780	SF1	62	99.237	Callithrix_jacchus
ENSEEUG00000001058	SF1	100	99.237	ENSCAFG00000014239	SF1	62	99.237	Canis_familiaris
ENSEEUG00000001058	SF1	100	99.237	ENSCAFG00020014381	SF1	62	99.237	Canis_lupus_dingo
ENSEEUG00000001058	SF1	100	99.237	ENSCHIG00000025867	SF1	72	99.237	Capra_hircus
ENSEEUG00000001058	SF1	66	99.574	ENSTSYG00000033618	SF1	75	99.574	Carlito_syrichta
ENSEEUG00000001058	SF1	100	98.982	ENSCAPG00000010762	SF1	70	98.982	Cavia_aperea
ENSEEUG00000001058	SF1	100	98.982	ENSCPOG00000012290	SF1	73	98.982	Cavia_porcellus
ENSEEUG00000001058	SF1	100	99.237	ENSCCAG00000037881	SF1	83	99.150	Cebus_capucinus
ENSEEUG00000001058	SF1	93	86.264	ENSCCAG00000023781	-	72	85.846	Cebus_capucinus
ENSEEUG00000001058	SF1	100	99.237	ENSCATG00000011564	SF1	78	99.077	Cercocebus_atys
ENSEEUG00000001058	SF1	100	99.237	ENSCSAG00000007258	SF1	72	99.237	Chlorocebus_sabaeus
ENSEEUG00000001058	SF1	94	99.185	ENSCHOG00000006008	SF1	69	99.185	Choloepus_hoffmanni
ENSEEUG00000001058	SF1	83	60.961	ENSCING00000005564	-	67	61.721	Ciona_intestinalis
ENSEEUG00000001058	SF1	95	59.580	ENSCSAVG00000009055	-	72	63.787	Ciona_savignyi
ENSEEUG00000001058	SF1	100	99.237	ENSCANG00000042201	SF1	78	99.077	Colobus_angolensis_palliatus
ENSEEUG00000001058	SF1	100	98.473	ENSCGRG00001003677	Sf1	69	98.473	Cricetulus_griseus_chok1gshd
ENSEEUG00000001058	SF1	100	98.473	ENSCGRG00000001708	Sf1	72	98.473	Cricetulus_griseus_crigri
ENSEEUG00000001058	SF1	90	79.224	ENSCSEG00000014375	sf1	51	77.273	Cynoglossus_semilaevis
ENSEEUG00000001058	SF1	83	85.846	ENSCVAG00000001670	sf1	56	80.000	Cyprinodon_variegatus
ENSEEUG00000001058	SF1	87	80.802	ENSDARG00000008188	sf1	62	79.245	Danio_rerio
ENSEEUG00000001058	SF1	100	99.746	ENSDNOG00000001282	SF1	72	99.746	Dasypus_novemcinctus
ENSEEUG00000001058	SF1	100	99.237	ENSDORG00000016334	Sf1	62	99.237	Dipodomys_ordii
ENSEEUG00000001058	SF1	93	88.736	ENSETEG00000012830	SF1	51	87.637	Echinops_telfairi
ENSEEUG00000001058	SF1	100	98.728	ENSEASG00005018272	SF1	72	98.728	Equus_asinus_asinus
ENSEEUG00000001058	SF1	100	98.982	ENSECAG00000024544	SF1	72	98.982	Equus_caballus
ENSEEUG00000001058	SF1	100	99.237	ENSFCAG00000012231	SF1	62	99.237	Felis_catus
ENSEEUG00000001058	SF1	100	99.237	ENSFDAG00000009833	SF1	70	99.237	Fukomys_damarensis
ENSEEUG00000001058	SF1	83	82.687	ENSFHEG00000022656	sf1	53	78.075	Fundulus_heteroclitus
ENSEEUG00000001058	SF1	70	89.474	ENSGMOG00000007469	sf1	52	88.542	Gadus_morhua
ENSEEUG00000001058	SF1	83	85.801	ENSGAFG00000019284	sf1	68	81.421	Gambusia_affinis
ENSEEUG00000001058	SF1	84	80.294	ENSGACG00000000826	sf1	59	76.839	Gasterosteus_aculeatus
ENSEEUG00000001058	SF1	97	89.474	ENSGAGG00000021691	SF1	50	89.560	Gopherus_agassizii
ENSEEUG00000001058	SF1	83	83.284	ENSHBUG00000011598	sf1	53	77.984	Haplochromis_burtoni
ENSEEUG00000001058	SF1	100	99.237	ENSHGLG00000009541	SF1	69	99.237	Heterocephalus_glaber_female
ENSEEUG00000001058	SF1	97	88.158	ENSHGLG00100008076	-	72	85.989	Heterocephalus_glaber_male
ENSEEUG00000001058	SF1	97	90.152	ENSHGLG00100008255	-	78	89.474	Heterocephalus_glaber_male
ENSEEUG00000001058	SF1	100	99.237	ENSHGLG00100013879	-	73	99.237	Heterocephalus_glaber_male
ENSEEUG00000001058	SF1	84	81.818	ENSHCOG00000011388	sf1	52	76.676	Hippocampus_comes
ENSEEUG00000001058	SF1	92	94.215	ENSSTOG00000024353	-	69	93.889	Ictidomys_tridecemlineatus
ENSEEUG00000001058	SF1	100	99.237	ENSSTOG00000009790	-	63	99.237	Ictidomys_tridecemlineatus
ENSEEUG00000001058	SF1	100	98.982	ENSJJAG00000011788	Sf1	62	98.982	Jaculus_jaculus
ENSEEUG00000001058	SF1	84	84.024	ENSKMAG00000005854	sf1	55	78.610	Kryptolebias_marmoratus
ENSEEUG00000001058	SF1	83	82.789	ENSLBEG00000019836	sf1	57	78.342	Labrus_bergylta
ENSEEUG00000001058	SF1	93	79.784	ENSLACG00000018493	SF1	61	82.899	Latimeria_chalumnae
ENSEEUG00000001058	SF1	83	84.985	ENSLOCG00000002130	sf1	52	79.558	Lepisosteus_oculatus
ENSEEUG00000001058	SF1	100	98.982	ENSLAFG00000007201	SF1	67	94.321	Loxodonta_africana
ENSEEUG00000001058	SF1	100	99.237	ENSMFAG00000033122	SF1	78	99.077	Macaca_fascicularis
ENSEEUG00000001058	SF1	100	99.237	ENSMMUG00000022606	SF1	88	98.619	Macaca_mulatta
ENSEEUG00000001058	SF1	100	99.237	ENSMNEG00000037901	SF1	78	99.077	Macaca_nemestrina
ENSEEUG00000001058	SF1	100	99.237	ENSMLEG00000040706	SF1	78	99.077	Mandrillus_leucophaeus
ENSEEUG00000001058	SF1	83	82.934	ENSMAMG00000001780	sf1	53	78.342	Mastacembelus_armatus
ENSEEUG00000001058	SF1	83	82.985	ENSMZEG00005009196	sf1	53	77.719	Maylandia_zebra
ENSEEUG00000001058	SF1	100	98.473	ENSMAUG00000014064	Sf1	69	98.473	Mesocricetus_auratus
ENSEEUG00000001058	SF1	100	99.237	ENSMICG00000001202	SF1	83	98.870	Microcebus_murinus
ENSEEUG00000001058	SF1	100	98.728	ENSMOCG00000022038	Sf1	69	98.728	Microtus_ochrogaster
ENSEEUG00000001058	SF1	83	82.569	ENSMMOG00000020474	sf1	53	77.384	Mola_mola
ENSEEUG00000001058	SF1	97	97.644	ENSMODG00000029407	SF1	83	97.644	Monodelphis_domestica
ENSEEUG00000001058	SF1	83	84.923	ENSMALG00000020521	sf1	60	78.904	Monopterus_albus
ENSEEUG00000001058	SF1	100	98.473	MGP_CAROLIEiJ_G0022607	Sf1	90	99.582	Mus_caroli
ENSEEUG00000001058	SF1	100	98.473	ENSMUSG00000024949	Sf1	90	99.582	Mus_musculus
ENSEEUG00000001058	SF1	100	98.473	MGP_PahariEiJ_G0014101	Sf1	90	99.582	Mus_pahari
ENSEEUG00000001058	SF1	100	98.473	MGP_SPRETEiJ_G0023518	Sf1	90	99.582	Mus_spretus
ENSEEUG00000001058	SF1	100	99.491	ENSMPUG00000012684	SF1	62	99.491	Mustela_putorius_furo
ENSEEUG00000001058	SF1	100	94.402	ENSMLUG00000029800	-	63	95.330	Myotis_lucifugus
ENSEEUG00000001058	SF1	100	99.491	ENSMLUG00000015217	-	62	99.491	Myotis_lucifugus
ENSEEUG00000001058	SF1	100	98.982	ENSNGAG00000005550	Sf1	69	98.982	Nannospalax_galili
ENSEEUG00000001058	SF1	83	84.802	ENSNBRG00000017606	sf1	54	79.348	Neolamprologus_brichardi
ENSEEUG00000001058	SF1	100	99.237	ENSNLEG00000005236	-	78	99.077	Nomascus_leucogenys
ENSEEUG00000001058	SF1	100	98.473	ENSMEUG00000013424	SF1	74	98.473	Notamacropus_eugenii
ENSEEUG00000001058	SF1	100	99.237	ENSOPRG00000005008	SF1	79	99.237	Ochotona_princeps
ENSEEUG00000001058	SF1	100	96.438	ENSODEG00000006102	-	62	96.438	Octodon_degus
ENSEEUG00000001058	SF1	83	83.284	ENSONIG00000015728	sf1	53	77.984	Oreochromis_niloticus
ENSEEUG00000001058	SF1	91	87.709	ENSOANG00000002909	SF1	84	86.257	Ornithorhynchus_anatinus
ENSEEUG00000001058	SF1	100	99.237	ENSOCUG00000026486	SF1	62	99.237	Oryctolagus_cuniculus
ENSEEUG00000001058	SF1	86	80.692	ENSORLG00000011853	sf1	52	77.480	Oryzias_latipes
ENSEEUG00000001058	SF1	86	80.692	ENSORLG00020011834	sf1	52	77.480	Oryzias_latipes_hni
ENSEEUG00000001058	SF1	84	80.473	ENSORLG00015012855	sf1	52	76.944	Oryzias_latipes_hsok
ENSEEUG00000001058	SF1	84	82.544	ENSOMEG00000005210	sf1	53	77.748	Oryzias_melastigma
ENSEEUG00000001058	SF1	100	99.237	ENSOGAG00000016196	SF1	62	99.237	Otolemur_garnettii
ENSEEUG00000001058	SF1	100	99.237	ENSOARG00000009166	SF1	69	99.237	Ovis_aries
ENSEEUG00000001058	SF1	100	99.237	ENSPPAG00000002799	-	84	99.150	Pan_paniscus
ENSEEUG00000001058	SF1	100	99.237	ENSPPRG00000013566	SF1	64	99.237	Panthera_pardus
ENSEEUG00000001058	SF1	100	99.237	ENSPTIG00000016141	SF1	71	99.237	Panthera_tigris_altaica
ENSEEUG00000001058	SF1	100	99.237	ENSPTRG00000003846	SF1	87	99.194	Pan_troglodytes
ENSEEUG00000001058	SF1	100	99.237	ENSPANG00000020754	SF1	78	99.077	Papio_anubis
ENSEEUG00000001058	SF1	85	79.412	ENSPKIG00000012116	sf1	86	77.811	Paramormyrops_kingsleyae
ENSEEUG00000001058	SF1	81	88.438	ENSPSIG00000003610	SF1	59	88.487	Pelodiscus_sinensis
ENSEEUG00000001058	SF1	100	98.473	ENSPEMG00000010463	Sf1	69	98.473	Peromyscus_maniculatus_bairdii
ENSEEUG00000001058	SF1	100	98.219	ENSPCIG00000018173	SF1	64	98.219	Phascolarctos_cinereus
ENSEEUG00000001058	SF1	83	85.846	ENSPFOG00000013683	sf1	59	80.822	Poecilia_formosa
ENSEEUG00000001058	SF1	83	84.132	ENSPLAG00000018076	sf1	54	79.144	Poecilia_latipinna
ENSEEUG00000001058	SF1	83	84.132	ENSPMEG00000005726	sf1	55	79.412	Poecilia_mexicana
ENSEEUG00000001058	SF1	83	83.533	ENSPREG00000004155	sf1	53	78.877	Poecilia_reticulata
ENSEEUG00000001058	SF1	100	99.237	ENSPPYG00000003098	-	74	99.237	Pongo_abelii
ENSEEUG00000001058	SF1	100	98.982	ENSPCAG00000013631	SF1	59	98.982	Procavia_capensis
ENSEEUG00000001058	SF1	100	99.237	ENSPCOG00000027546	SF1	83	98.870	Propithecus_coquereli
ENSEEUG00000001058	SF1	100	99.746	ENSPVAG00000016938	SF1	59	99.746	Pteropus_vampyrus
ENSEEUG00000001058	SF1	83	82.985	ENSPNYG00000004673	sf1	53	77.719	Pundamilia_nyererei
ENSEEUG00000001058	SF1	83	86.228	ENSPNAG00000013072	sf1	53	80.000	Pygocentrus_nattereri
ENSEEUG00000001058	SF1	100	98.473	ENSRNOG00000021085	Sf1	77	95.325	Rattus_norvegicus
ENSEEUG00000001058	SF1	100	99.237	ENSRBIG00000042818	SF1	79	98.780	Rhinopithecus_bieti
ENSEEUG00000001058	SF1	100	99.237	ENSRROG00000045655	SF1	82	98.886	Rhinopithecus_roxellana
ENSEEUG00000001058	SF1	65	44.569	YLR116W	MSL5	54	44.280	Saccharomyces_cerevisiae
ENSEEUG00000001058	SF1	99	86.598	ENSSBOG00000022267	-	90	85.083	Saimiri_boliviensis_boliviensis
ENSEEUG00000001058	SF1	90	92.717	ENSSHAG00000006841	SF1	65	94.118	Sarcophilus_harrisii
ENSEEUG00000001058	SF1	93	76.440	ENSSMAG00000007549	sf1	56	76.053	Scophthalmus_maximus
ENSEEUG00000001058	SF1	83	81.737	ENSSDUG00000003903	sf1	55	77.540	Seriola_dumerili
ENSEEUG00000001058	SF1	83	81.737	ENSSLDG00000013075	sf1	53	77.540	Seriola_lalandi_dorsalis
ENSEEUG00000001058	SF1	99	97.442	ENSSARG00000008180	SF1	76	97.442	Sorex_araneus
ENSEEUG00000001058	SF1	97	85.500	ENSSPUG00000012907	SF1	64	85.417	Sphenodon_punctatus
ENSEEUG00000001058	SF1	83	82.335	ENSSPAG00000019060	sf1	53	77.540	Stegastes_partitus
ENSEEUG00000001058	SF1	100	99.491	ENSSSCG00000013021	SF1	72	99.491	Sus_scrofa
ENSEEUG00000001058	SF1	87	72.365	ENSTNIG00000004820	sf1	69	68.883	Tetraodon_nigroviridis
ENSEEUG00000001058	SF1	93	90.385	ENSTBEG00000013133	SF1	53	90.385	Tupaia_belangeri
ENSEEUG00000001058	SF1	98	93.282	ENSTTRG00000008857	SF1	71	93.282	Tursiops_truncatus
ENSEEUG00000001058	SF1	84	94.578	ENSUAMG00000011977	SF1	63	94.578	Ursus_americanus
ENSEEUG00000001058	SF1	100	99.237	ENSUMAG00000007268	SF1	75	99.237	Ursus_maritimus
ENSEEUG00000001058	SF1	75	100.000	ENSVPAG00000011912	SF1	55	100.000	Vicugna_pacos
ENSEEUG00000001058	SF1	100	99.237	ENSVVUG00000028585	SF1	72	99.237	Vulpes_vulpes
ENSEEUG00000001058	SF1	98	80.563	ENSXETG00000008434	sf1	60	81.471	Xenopus_tropicalis
ENSEEUG00000001058	SF1	83	85.583	ENSXCOG00000003704	sf1	67	80.822	Xiphophorus_couchianus
ENSEEUG00000001058	SF1	83	83.881	ENSXMAG00000007822	sf1	55	79.412	Xiphophorus_maculatus